RNA–Protein interactions for RNA: YDL204W

RTN2, Transcript of Reticulon protein, yeast

Gene RTN2, Length 1,182 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN2	YDL204W	RAD18	P10862	487 aa		10.88	□□□□□ -0.67
RTN2	YDL204W	CLN3	P13365	580 aa		10.88	□□□□□ -0.67
RTN2	YDL204W	DAL7	P21826	554 aa		10.88	□□□□□ -0.67
RTN2	YDL204W	SUV3	P32580	737 aa		10.88	□□□□□ -0.67
RTN2	YDL204W	UBP5	P39944	805 aa		10.88	□□□□□ -0.67
RTN2	YDL204W	GPD2	P41911	440 aa	Known RBP	10.88	□□□□□ -0.67
RTN2	YDL204W	DIP5	P53388	608 aa		10.88	□□□□□ -0.67
RTN2	YDL204W	YMR114C	Q04471	368 aa	Known RBP	10.88	□□□□□ -0.67
RTN2	YDL204W	POB3	Q04636	552 aa	Known RBP	10.88	□□□□□ -0.67
RTN2	YDL204W	NUR1	Q12066	484 aa		10.88	□□□□□ -0.67
RTN2	YDL204W	PHO8	P11491	566 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	SUP45	P12385	437 aa	Known RBP	10.87	□□□□□ -0.67
RTN2	YDL204W	PRP22	P24384	1145 aa	Known RBP	10.87	□□□□□ -0.67
RTN2	YDL204W	PAP1	P29468	568 aa	Known RBP	10.87	□□□□□ -0.67
RTN2	YDL204W	CLB5	P30283	435 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	UBP13	P38187	747 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	SDS3	P40505	327 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	MMM1	P41800	426 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	ALD6	P54115	500 aa	Known RBP	10.87	□□□□□ -0.67
RTN2	YDL204W	RNT1	Q02555	471 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	PHM6	Q05637	104 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	CUR1	Q06469	252 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	OMS1	Q06668	471 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	MLH2	Q07980	695 aa		10.87	□□□□□ -0.67
RTN2	YDL204W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	10.86	□□□□□ -0.67	not detected
RTN2	YDL204W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	10.86	□□□□□ -0.67	not detected
RTN2	YDL204W	TCP1	P12612	559 aa	Known RBP	10.86	□□□□□ -0.67
RTN2	YDL204W	GFA1	P14742	717 aa	Known RBP	10.86	□□□□□ -0.67
RTN2	YDL204W	ESS1	P22696	170 aa		10.86	□□□□□ -0.67
RTN2	YDL204W	KIC1	P38692	1080 aa		10.86	□□□□□ -0.67
RTN2	YDL204W	VHR2	P40041	505 aa		10.86	□□□□□ -0.67
RTN2	YDL204W	HXT8	P40886	569 aa		10.86	□□□□□ -0.67
RTN2	YDL204W	NCS2	P53923	493 aa	Predicted RBP	10.86	□□□□□ -0.67
RTN2	YDL204W	MRS2	Q01926	470 aa		10.86	□□□□□ -0.67
RTN2	YDL204W	SVF1	Q05515	481 aa		10.86	□□□□□ -0.67
RTN2	YDL204W	YLR297W	Q05899	129 aa		10.86	□□□□□ -0.67
RTN2	YDL204W	RUD3	Q12234	484 aa	Known RBP	10.86	□□□□□ -0.67
RTN2	YDL204W	SET5	P38890	526 aa	Known RBP	10.85	□□□□□ -0.67
RTN2	YDL204W	ULP2	P40537	1034 aa	Predicted RBP	10.85	□□□□□ -0.67
RTN2	YDL204W	MIC19	P43594	170 aa		10.85	□□□□□ -0.67
RTN2	YDL204W	TAD1	P53065	400 aa		10.85	□□□□□ -0.67
RTN2	YDL204W	YGR021W	P53212	290 aa		10.85	□□□□□ -0.67
RTN2	YDL204W	ENV11	P53246	860 aa		10.85	□□□□□ -0.67
RTN2	YDL204W	BTN2	P53286	410 aa		10.85	□□□□□ -0.67
RTN2	YDL204W	NOP6	Q07623	225 aa	Known RBP	10.85	□□□□□ -0.67
RTN2	YDL204W	WHI4	Q07655	649 aa	Known RBP	10.85	□□□□□ -0.67
RTN2	YDL204W	GUD1	Q07729	489 aa		10.85	□□□□□ -0.67
RTN2	YDL204W	FAL1	Q12099	399 aa	Known RBP	10.85	□□□□□ -0.67
RTN2	YDL204W	RMP1	Q12530	201 aa		10.85	□□□□□ -0.67
RTN2	YDL204W	CSR2	Q12734	1121 aa		10.85	□□□□□ -0.67
RTN2	YDL204W	CHS2	P14180	963 aa		10.84	□□□□□ -0.67
RTN2	YDL204W	OLA1	P38219	394 aa	Known RBP	10.84	□□□□□ -0.67
RTN2	YDL204W	TDA3	P38758	523 aa		10.84	□□□□□ -0.67
RTN2	YDL204W	FIS1	P40515	155 aa		10.84	□□□□□ -0.67
RTN2	YDL204W	FIG4	P42837	879 aa		10.84	□□□□□ -0.67
RTN2	YDL204W	ZPR1	P53303	486 aa	Known RBP	10.84	□□□□□ -0.67
RTN2	YDL204W	VTI1	Q04338	217 aa		10.84	□□□□□ -0.67
RTN2	YDL204W	SPH1	Q06160	661 aa		10.84	□□□□□ -0.67
RTN2	YDL204W	CSR1	Q06705	408 aa	Known RBP	10.84	□□□□□ -0.67
RTN2	YDL204W	CRD1	Q07560	283 aa		10.84	□□□□□ -0.67
RTN2	YDL204W	RLP24	Q07915	199 aa	Known RBP	10.84	□□□□□ -0.67
RTN2	YDL204W	TY1B-A	O13527	1196 aa	Known RBP	10.83	□□□□□ -0.68
RTN2	YDL204W	SAM1	P10659	382 aa	Known RBP	10.83	□□□□□ -0.68
RTN2	YDL204W	DBP5	P20449	482 aa	Known RBP	10.83	□□□□□ -0.68
RTN2	YDL204W	PER1	P25625	357 aa		10.83	□□□□□ -0.68
RTN2	YDL204W	RTG2	P32608	588 aa	Known RBP	10.83	□□□□□ -0.68
RTN2	YDL204W	YSC83	P32792	385 aa		10.83	□□□□□ -0.68
RTN2	YDL204W	YEL1	P34225	687 aa		10.83	□□□□□ -0.68
RTN2	YDL204W	MUD2	P36084	527 aa	Known RBP	10.83	□□□□□ -0.68
RTN2	YDL204W	YKL023W	P36103	277 aa	Known RBP	10.83	□□□□□ -0.68
RTN2	YDL204W	YKR018C	P36114	725 aa		10.83	□□□□□ -0.68
RTN2	YDL204W	VPS41	P38959	992 aa		10.83	□□□□□ -0.68
RTN2	YDL204W	RPC17	P47076	161 aa		10.83	□□□□□ -0.68
RTN2	YDL204W	KAP114	P53067	1004 aa		10.83	□□□□□ -0.68
RTN2	YDL204W	TIM8	P57744	87 aa		10.83	□□□□□ -0.68
RTN2	YDL204W	APL5	Q08951	932 aa	Known RBP	10.83	□□□□□ -0.68
RTN2	YDL204W	ZRT2	Q12436	422 aa		10.83	□□□□□ -0.68
RTN2	YDL204W	RAD1	P06777	1100 aa		10.82	□□□□□ -0.68
RTN2	YDL204W	DEP1	P31385	405 aa		10.82	□□□□□ -0.68
RTN2	YDL204W	VPS35	P34110	944 aa		10.82	□□□□□ -0.68
RTN2	YDL204W	TGL1	P34163	548 aa		10.82	□□□□□ -0.68
RTN2	YDL204W	SAP1	P39955	897 aa	Known RBP	10.82	□□□□□ -0.68
RTN2	YDL204W	RAD26	P40352	1085 aa		10.82	□□□□□ -0.68
RTN2	YDL204W	JJJ1	P53863	590 aa		10.82	□□□□□ -0.68
RTN2	YDL204W	ESBP6	P53918	673 aa		10.82	□□□□□ -0.68
RTN2	YDL204W	URH1	Q04179	340 aa		10.82	□□□□□ -0.68
RTN2	YDL204W	YMR018W	Q04364	514 aa		10.82	□□□□□ -0.68
RTN2	YDL204W	YML082W	Q04533	649 aa	Known RBP	10.82	□□□□□ -0.68
RTN2	YDL204W	TMA64	Q04600	565 aa	Known RBP	10.82	□□□□□ -0.68
RTN2	YDL204W	THS1	P04801	734 aa	Known RBP	10.81	□□□□□ -0.68
RTN2	YDL204W	ATG19	P35193	415 aa		10.81	□□□□□ -0.68
RTN2	YDL204W	OCT1	P35999	772 aa		10.81	□□□□□ -0.68
RTN2	YDL204W	UBP11	P36026	717 aa		10.81	□□□□□ -0.68
RTN2	YDL204W	PGM2	P37012	569 aa	Known RBP	10.81	□□□□□ -0.68
RTN2	YDL204W	PSY2	P40164	858 aa		10.81	□□□□□ -0.68
RTN2	YDL204W	VTC3	Q02725	835 aa		10.81	□□□□□ -0.68
RTN2	YDL204W	SYH1	Q02875	849 aa	Known RBP	10.81	□□□□□ -0.68
RTN2	YDL204W	DON1	Q05610	365 aa		10.81	□□□□□ -0.68
RTN2	YDL204W	SIL1	Q08199	421 aa		10.81	□□□□□ -0.68
RTN2	YDL204W	RIO1	Q12196	484 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 5,963 RNA–protein pairs in 111.2 ms