RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 COG6Q9Y2V7 657 aa22.17■■□□□ 1.14
PHGDH-230ENST00000641927 ADCY9O60503 1353 aa22.16■■□□□ 1.14
PHGDH-230ENST00000641927 RPS6KA4O75676 772 aa22.16■■□□□ 1.14
PHGDH-230ENST00000641927 DZIP3Q86Y13 1208 aaKnown RBP22.16■■□□□ 1.14
PHGDH-230ENST00000641927 TMEM57Q8N5G2 664 aa22.16■■□□□ 1.14
PHGDH-230ENST00000641927 DNAAF4Q8WXU2 420 aa22.16■■□□□ 1.14
PHGDH-230ENST00000641927 TBC1D2BQ9UPU7 963 aa22.16■■□□□ 1.14
PHGDH-230ENST00000641927 ABCC4O15439 1325 aa22.16■■□□□ 1.14
PHGDH-230ENST00000641927 COL15A1P39059 1388 aa22.16■■□□□ 1.14
PHGDH-230ENST00000641927 PHF14O94880 888 aa22.15■■□□□ 1.14
PHGDH-230ENST00000641927 FKBP8Q14318 412 aa22.15■■□□□ 1.14
PHGDH-230ENST00000641927 SMIM5Q71RC9 77 aa22.15■■□□□ 1.14
PHGDH-230ENST00000641927 ITPRIPQ8IWB1 547 aa22.15■■□□□ 1.14
PHGDH-230ENST00000641927 PLBD2Q8NHP8 589 aa22.15■■□□□ 1.14
PHGDH-230ENST00000641927 CRBNQ96SW2 442 aa22.14■■□□□ 1.14
PHGDH-230ENST00000641927 A0A087WZG4 1122 aa22.14■■□□□ 1.13
PHGDH-230ENST00000641927 MAP3K15Q6ZN16 1313 aa22.12■■□□□ 1.13
PHGDH-230ENST00000641927 CCT4P50991 539 aaKnown RBP22.12■■□□□ 1.13
PHGDH-230ENST00000641927 UPF1Q92900 1129 aaKnown RBP eCLIP22.12■■□□□ 1.13
PHGDH-230ENST00000641927 TFCP2L1Q9NZI6 479 aa22.12■■□□□ 1.13
PHGDH-230ENST00000641927 NEXNQ0ZGT2 675 aa22.11■■□□□ 1.13
PHGDH-230ENST00000641927 MVPQ14764 893 aaKnown RBP22.11■■□□□ 1.13
PHGDH-230ENST00000641927 ILDR2Q71H61 639 aa22.11■■□□□ 1.13
PHGDH-230ENST00000641927 AMIGO3Q86WK7 504 aa22.11■■□□□ 1.13
PHGDH-230ENST00000641927 ZNF827Q17R98 1081 aa22.11■■□□□ 1.13
PHGDH-230ENST00000641927 TRAPPC3LQ5T215 181 aa22.11■■□□□ 1.13
PHGDH-230ENST00000641927 MYD88Q99836 296 aa22.11■■□□□ 1.13
PHGDH-230ENST00000641927 METTL22Q9BUU2 404 aaPredicted RBP22.11■■□□□ 1.13
PHGDH-230ENST00000641927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.1■■□□□ 1.13
PHGDH-230ENST00000641927 INTS3Q68E01 1043 aaKnown RBP22.1■■□□□ 1.13
PHGDH-230ENST00000641927 EXOC6Q8TAG9 804 aa22.1■■□□□ 1.13
PHGDH-230ENST00000641927 ARFGEF2Q9Y6D5 1785 aa22.1■■□□□ 1.13
PHGDH-230ENST00000641927 PXDNLA1KZ92 1463 aa22.1■■□□□ 1.13
PHGDH-230ENST00000641927 RFC4P35249 363 aa22.09■■□□□ 1.13
PHGDH-230ENST00000641927 ARHGEF1Q92888 912 aaKnown RBP22.09■■□□□ 1.13
PHGDH-230ENST00000641927 AKT1S1Q96B36 256 aa22.09■■□□□ 1.13
PHGDH-230ENST00000641927 SRCIN1Q9C0H9 1055 aa22.09■■□□□ 1.13
PHGDH-230ENST00000641927 HLFQ16534 295 aa22.08■■□□□ 1.13
PHGDH-230ENST00000641927 BEND3Q5T5X7 828 aa22.08■■□□□ 1.13
PHGDH-230ENST00000641927 DDX19BQ9UMR2 479 aa22.08■■□□□ 1.13
PHGDH-230ENST00000641927 ERVV-1B6SEH8 477 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 ZPR1O75312 459 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 SSFA2P28290 1259 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 NUP188Q5SRE5 1749 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 UBR3Q6ZT12 1888 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 ATP5J2-PTCD1G3V325 749 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 CAMTA2O94983 1202 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 ADRA2BP18089 450 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 CWF19L2Q2TBE0 894 aaKnown RBP22.07■■□□□ 1.12
PHGDH-230ENST00000641927 GIGYF2Q6Y7W6 1299 aaKnown RBP22.07■■□□□ 1.12
PHGDH-230ENST00000641927 LINS1Q8NG48 757 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 STK32BQ9NY57 414 aa22.07■■□□□ 1.12
PHGDH-230ENST00000641927 ATP10DQ9P241 1426 aa22.05■■□□□ 1.12
PHGDH-230ENST00000641927 MSH5O43196 834 aa22.05■■□□□ 1.12
PHGDH-230ENST00000641927 USPL1Q5W0Q7 1092 aa22.05■■□□□ 1.12
PHGDH-230ENST00000641927 ANO8Q9HCE9 1232 aaPredicted RBP22.05■■□□□ 1.12
PHGDH-230ENST00000641927 SRP68Q9UHB9 627 aaKnown RBP22.05■■□□□ 1.12
PHGDH-230ENST00000641927 NARFQ9UHQ1 456 aa22.05■■□□□ 1.12
PHGDH-230ENST00000641927 ZNF652Q9Y2D9 606 aa22.05■■□□□ 1.12
PHGDH-230ENST00000641927 TCIRG1Q13488 830 aa22.04■■□□□ 1.12
PHGDH-230ENST00000641927 HSP90AB3PQ58FF7 597 aa22.04■■□□□ 1.12
PHGDH-230ENST00000641927 GTF3C3Q9Y5Q9 886 aa22.04■■□□□ 1.12
PHGDH-230ENST00000641927 IGKV5-2P06315 115 aa22.04■■□□□ 1.12
PHGDH-230ENST00000641927 SLC15A2Q16348 729 aa22.04■■□□□ 1.12
PHGDH-230ENST00000641927 NEURL1BA8MQ27 555 aa22.03■■□□□ 1.12
PHGDH-230ENST00000641927 ALDH1L1O75891 902 aa22.03■■□□□ 1.12
PHGDH-230ENST00000641927 GPTP24298 496 aa22.03■■□□□ 1.12
PHGDH-230ENST00000641927 FLAD1Q8NFF5 587 aa22.02■■□□□ 1.12
PHGDH-230ENST00000641927 CHMP4BQ9H444 224 aaKnown RBP22.02■■□□□ 1.12
PHGDH-230ENST00000641927 C4AP0C0L4 1744 aa22.02■■□□□ 1.12
PHGDH-230ENST00000641927 USP42Q9H9J4 1324 aaKnown RBP22.02■■□□□ 1.12
PHGDH-230ENST00000641927 ZBTB7BO15156 539 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-230ENST00000641927 C9orf78Q9NZ63 289 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-230ENST00000641927 N4BP2Q86UW6 1770 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-230ENST00000641927 NUP98P52948 1817 aa22.01■■□□□ 1.11
PHGDH-230ENST00000641927 BCORQ6W2J9 1755 aa22.01■■□□□ 1.11
PHGDH-230ENST00000641927 CLEC4GQ6UXB4 293 aa22.01■■□□□ 1.11
PHGDH-230ENST00000641927 MEIS3Q99687 375 aa22.01■■□□□ 1.11
PHGDH-230ENST00000641927 CWC25Q9NXE8 425 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-230ENST00000641927 SCN7AQ01118 1682 aa22■■□□□ 1.11
PHGDH-230ENST00000641927 AFDNP55196 1824 aaKnown RBP22■■□□□ 1.11
PHGDH-230ENST00000641927 GCKRQ14397 625 aa22■■□□□ 1.11
PHGDH-230ENST00000641927 COL23A1Q86Y22 540 aaPredicted RBP22■■□□□ 1.11
PHGDH-230ENST00000641927 ISCA1Q9BUE6 129 aa22■■□□□ 1.11
PHGDH-230ENST00000641927 PNPLA7Q6ZV29 1317 aa22■■□□□ 1.11
PHGDH-230ENST00000641927 TUBGCP6Q96RT7 1819 aa22■■□□□ 1.11
PHGDH-230ENST00000641927 BICDL1Q6ZP65 573 aa21.99■■□□□ 1.11
PHGDH-230ENST00000641927 CCDC191Q8NCU4 936 aa21.99■■□□□ 1.11
PHGDH-230ENST00000641927 BCL2L12Q9HB09 334 aa21.99■■□□□ 1.11
PHGDH-230ENST00000641927 NIP7Q9Y221 180 aaKnown RBP eCLIP21.99■■□□□ 1.11
PHGDH-230ENST00000641927 USP44Q9H0E7 712 aa21.98■■□□□ 1.11
PHGDH-230ENST00000641927 GRM8O00222 908 aa21.98■■□□□ 1.11
PHGDH-230ENST00000641927 GNAI3P08754 354 aa21.98■■□□□ 1.11
PHGDH-230ENST00000641927 ZNF34Q8IZ26 560 aa21.98■■□□□ 1.11
PHGDH-230ENST00000641927 ZBTB40Q9NUA8 1239 aa21.98■■□□□ 1.11
PHGDH-230ENST00000641927 ANKRD36CQ5JPF3 1778 aa21.97■■□□□ 1.11
PHGDH-230ENST00000641927 RGL2O15211 777 aa21.97■■□□□ 1.11
PHGDH-230ENST00000641927 UBTFL1P0CB47 393 aaPredicted RBP21.97■■□□□ 1.11
PHGDH-230ENST00000641927 ERICH6BQ5W0A0 696 aa21.97■■□□□ 1.11
PHGDH-230ENST00000641927 NLRP10Q86W26 655 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms