RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ZGPATQ8N5A5 531 aaKnown RBP20.68■□□□□ 0.9
PHGDH-229ENST00000641891 GBP4Q96PP9 640 aa20.68■□□□□ 0.9
PHGDH-229ENST00000641891 FMNL2Q96PY5 1086 aa20.68■□□□□ 0.9
PHGDH-229ENST00000641891 GLI3P10071 1580 aa20.68■□□□□ 0.9
PHGDH-229ENST00000641891 USP42Q9H9J4 1324 aaKnown RBP20.68■□□□□ 0.9
PHGDH-229ENST00000641891 SLAIN2Q9P270 581 aa20.68■□□□□ 0.9
PHGDH-229ENST00000641891 MCCP23508 829 aa20.67■□□□□ 0.9
PHGDH-229ENST00000641891 TOM1L2Q6ZVM7 507 aa20.67■□□□□ 0.9
PHGDH-229ENST00000641891 CLASRPQ8N2M8 674 aaKnown RBP20.67■□□□□ 0.9
PHGDH-229ENST00000641891 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
PHGDH-229ENST00000641891 PLEKHG2Q9H7P9 1386 aa20.67■□□□□ 0.9
PHGDH-229ENST00000641891 CNTROBQ8N137 903 aa20.66■□□□□ 0.9
PHGDH-229ENST00000641891 JARID2Q92833 1246 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-229ENST00000641891 METTL22Q9BUU2 404 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-229ENST00000641891 SOS2Q07890 1332 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-229ENST00000641891 PARP4Q9UKK3 1724 aaKnown RBP20.66■□□□□ 0.9
PHGDH-229ENST00000641891 NEXNQ0ZGT2 675 aa20.66■□□□□ 0.9
PHGDH-229ENST00000641891 PKP1Q13835 747 aa20.66■□□□□ 0.9
PHGDH-229ENST00000641891 GCKRQ14397 625 aa20.66■□□□□ 0.9
PHGDH-229ENST00000641891 HDAC5Q9UQL6 1122 aa20.66■□□□□ 0.9
PHGDH-229ENST00000641891 EPHA10Q5JZY3 1008 aa20.65■□□□□ 0.9
PHGDH-229ENST00000641891 KLHDC4Q8TBB5 520 aa20.65■□□□□ 0.9
PHGDH-229ENST00000641891 ARXQ96QS3 562 aa20.65■□□□□ 0.9
PHGDH-229ENST00000641891 TTC41PQ6P2S7 1318 aa20.65■□□□□ 0.9
PHGDH-229ENST00000641891 COL5A2P05997 1499 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-229ENST00000641891 SASH1O94885 1247 aa20.65■□□□□ 0.9
PHGDH-229ENST00000641891 ANKRD13DQ6ZTN6 518 aa20.65■□□□□ 0.9
PHGDH-229ENST00000641891 AACSQ86V21 672 aa20.64■□□□□ 0.89
PHGDH-229ENST00000641891 ERC1Q8IUD2 1116 aa20.64■□□□□ 0.89
PHGDH-229ENST00000641891 SIL1Q9H173 461 aa20.64■□□□□ 0.89
PHGDH-229ENST00000641891 SGSM2O43147 1006 aa20.63■□□□□ 0.89
PHGDH-229ENST00000641891 GLRX3O76003 335 aaKnown RBP20.63■□□□□ 0.89
PHGDH-229ENST00000641891 IFIT2P09913 472 aaKnown RBP20.63■□□□□ 0.89
PHGDH-229ENST00000641891 ZCRB1Q8TBF4 217 aaKnown RBP20.63■□□□□ 0.89
PHGDH-229ENST00000641891 ABCA3Q99758 1704 aa20.63■□□□□ 0.89
PHGDH-229ENST00000641891 ANAPC15P60006 121 aa20.63■□□□□ 0.89
PHGDH-229ENST00000641891 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
PHGDH-229ENST00000641891 ECHDC1Q9NTX5 307 aa20.63■□□□□ 0.89
PHGDH-229ENST00000641891 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
PHGDH-229ENST00000641891 KDM4FA0A1W2PPD8 638 aa20.62■□□□□ 0.89
PHGDH-229ENST00000641891 CWC27Q6UX04 472 aaKnown RBP20.62■□□□□ 0.89
PHGDH-229ENST00000641891 TMX3Q96JJ7 454 aa20.62■□□□□ 0.89
PHGDH-229ENST00000641891 ARFGEF2Q9Y6D5 1785 aa20.62■□□□□ 0.89
PHGDH-229ENST00000641891 PCDH11XQ9BZA7 1347 aa20.62■□□□□ 0.89
PHGDH-229ENST00000641891 PCDH11YQ9BZA8 1340 aa20.62■□□□□ 0.89
PHGDH-229ENST00000641891 CYP2E1P05181 493 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-229ENST00000641891 G3BP1Q13283 466 aaKnown RBP eCLIP20.62■□□□□ 0.899e-7■■■□□ 18.4
PHGDH-229ENST00000641891 UPF3BQ9BZI7 483 aaKnown RBP20.62■□□□□ 0.89
PHGDH-229ENST00000641891 AFDNP55196 1824 aaKnown RBP20.62■□□□□ 0.89
PHGDH-229ENST00000641891 ATP5J2-PTCD1G3V325 749 aa20.61■□□□□ 0.89
PHGDH-229ENST00000641891 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
PHGDH-229ENST00000641891 BAG4O95429 457 aaKnown RBP20.61■□□□□ 0.89
PHGDH-229ENST00000641891 HSPA4P34932 840 aa20.61■□□□□ 0.89
PHGDH-229ENST00000641891 EAF2Q96CJ1 260 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-229ENST00000641891 TLR7Q9NYK1 1049 aaKnown RBP20.61■□□□□ 0.89
PHGDH-229ENST00000641891 LSG1Q9H089 658 aaKnown RBP20.61■□□□□ 0.89
PHGDH-229ENST00000641891 CCDC8Q9H0W5 538 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-229ENST00000641891 STRN4Q9NRL3 753 aa20.61■□□□□ 0.89
PHGDH-229ENST00000641891 RAD50Q92878 1312 aa20.6■□□□□ 0.89
PHGDH-229ENST00000641891 CWC22Q9HCG8 908 aaKnown RBP20.6■□□□□ 0.89
PHGDH-229ENST00000641891 NUCB2P80303 420 aa20.59■□□□□ 0.89
PHGDH-229ENST00000641891 CLEC17AQ6ZS10 378 aa20.59■□□□□ 0.89
PHGDH-229ENST00000641891 IL17RAQ96F46 866 aa20.59■□□□□ 0.89
PHGDH-229ENST00000641891 GPATCH3Q96I76 525 aa20.59■□□□□ 0.89
PHGDH-229ENST00000641891 NBPF26B4DH59 902 aa20.59■□□□□ 0.89
PHGDH-229ENST00000641891 NBPF14Q5TI25 921 aa20.59■□□□□ 0.89
PHGDH-229ENST00000641891 NBPF10Q6P3W6 841 aaKnown RBP20.59■□□□□ 0.89
PHGDH-229ENST00000641891 UBE3BQ7Z3V4 1068 aa20.59■□□□□ 0.89
PHGDH-229ENST00000641891 NBPF15Q8N660 670 aa20.59■□□□□ 0.89
PHGDH-229ENST00000641891 DDX54Q8TDD1 881 aaKnown RBP20.59■□□□□ 0.89
PHGDH-229ENST00000641891 FSD2A1L4K1 749 aa20.58■□□□□ 0.89
PHGDH-229ENST00000641891 SHANK3Q9BYB0 1731 aa20.58■□□□□ 0.89
PHGDH-229ENST00000641891 DIAPH3Q9NSV4 1193 aa20.58■□□□□ 0.88
PHGDH-229ENST00000641891 ZDHHC9Q9Y397 364 aa20.58■□□□□ 0.88
PHGDH-229ENST00000641891 GOLGA6L3A6NEY3 463 aa20.57■□□□□ 0.88
PHGDH-229ENST00000641891 IL2RBP14784 551 aa20.57■□□□□ 0.88
PHGDH-229ENST00000641891 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
PHGDH-229ENST00000641891 KCPQ6ZWJ8 1503 aa20.56■□□□□ 0.88
PHGDH-229ENST00000641891 EPB41L2O43491 1005 aaKnown RBP20.56■□□□□ 0.88
PHGDH-229ENST00000641891 L1TD1Q5T7N2 865 aaKnown RBP20.56■□□□□ 0.88
PHGDH-229ENST00000641891 CARD10Q9BWT7 1032 aa20.56■□□□□ 0.88
PHGDH-229ENST00000641891 SNX14Q9Y5W7 946 aa20.56■□□□□ 0.88
PHGDH-229ENST00000641891 MCM2P49736 904 aa20.56■□□□□ 0.88
PHGDH-229ENST00000641891 RASEFQ8IZ41 740 aa20.56■□□□□ 0.88
PHGDH-229ENST00000641891 PLBD2Q8NHP8 589 aa20.56■□□□□ 0.88
PHGDH-229ENST00000641891 RTN4Q9NQC3 1192 aaKnown RBP20.55■□□□□ 0.88
PHGDH-229ENST00000641891 A0A087WZG4 1122 aa20.55■□□□□ 0.88
PHGDH-229ENST00000641891 ERVV-2B6SEH9 535 aa20.55■□□□□ 0.88
PHGDH-229ENST00000641891 A1BGP04217 495 aa20.55■□□□□ 0.88
PHGDH-229ENST00000641891 RFX5P48382 616 aaPredicted RBP20.55■□□□□ 0.88
PHGDH-229ENST00000641891 CUL4AQ13619 759 aa20.55■□□□□ 0.88
PHGDH-229ENST00000641891 MCTP1Q6DN14 999 aa20.55■□□□□ 0.88
PHGDH-229ENST00000641891 TTLL7Q6ZT98 887 aa20.55■□□□□ 0.88
PHGDH-229ENST00000641891 PAPPAQ13219 1627 aa20.55■□□□□ 0.88
PHGDH-229ENST00000641891 PTH1RQ03431 593 aa20.54■□□□□ 0.88
PHGDH-229ENST00000641891 KIAA1211Q6ZU35 1233 aa20.54■□□□□ 0.88
PHGDH-229ENST00000641891 EVI5LQ96CN4 794 aa20.54■□□□□ 0.88
PHGDH-229ENST00000641891 EVA1CP58658 441 aa20.53■□□□□ 0.88
PHGDH-229ENST00000641891 NKX1-1Q15270 411 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-229ENST00000641891 CHAMP1Q96JM3 812 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms