RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 CT47B1P0C2W7 299 aaPredicted RBP13.4□□□□□ -0.26
CASC19-247ENST00000641642 HMGB2P26583 209 aaKnown RBP13.4□□□□□ -0.26
CASC19-247ENST00000641642 NFATC2IPQ8NCF5 419 aa13.4□□□□□ -0.26
CASC19-247ENST00000641642 ITGB4P16144 1822 aa13.39□□□□□ -0.27
CASC19-247ENST00000641642 THUMPD2Q9BTF0 503 aaKnown RBP13.39□□□□□ -0.27
CASC19-247ENST00000641642 RYDENQ9NUL5 291 aaKnown RBP13.39□□□□□ -0.27
CASC19-247ENST00000641642 TSPYL4Q9UJ04 414 aa13.39□□□□□ -0.27
CASC19-247ENST00000641642 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
CASC19-247ENST00000641642 SMARCC1Q92922 1105 aaPredicted RBP13.38□□□□□ -0.27
CASC19-247ENST00000641642 ZNF428Q96B54 188 aa13.38□□□□□ -0.27
CASC19-247ENST00000641642 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
CASC19-247ENST00000641642 TOGARAM1Q9Y4F4 1720 aa13.38□□□□□ -0.27
CASC19-247ENST00000641642 SBF2Q86WG5 1849 aa13.37□□□□□ -0.27
CASC19-247ENST00000641642 DOT1LQ8TEK3 1739 aa13.37□□□□□ -0.27
CASC19-247ENST00000641642 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
CASC19-247ENST00000641642 ZNF790Q6PG37 636 aa13.37□□□□□ -0.27
CASC19-247ENST00000641642 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
CASC19-247ENST00000641642 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
CASC19-247ENST00000641642 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
CASC19-247ENST00000641642 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
CASC19-247ENST00000641642 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
CASC19-247ENST00000641642 HOXB7P09629 217 aa13.36□□□□□ -0.27
CASC19-247ENST00000641642 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
CASC19-247ENST00000641642 PIGBQ92521 554 aa13.36□□□□□ -0.27
CASC19-247ENST00000641642 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
CASC19-247ENST00000641642 LAS1LQ9Y4W2 734 aaKnown RBP13.36□□□□□ -0.27
CASC19-247ENST00000641642 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
CASC19-247ENST00000641642 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
CASC19-247ENST00000641642 SYTL4Q96C24 671 aaPredicted RBP13.35□□□□□ -0.27
CASC19-247ENST00000641642 TK2O00142 265 aa13.34□□□□□ -0.27
CASC19-247ENST00000641642 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
CASC19-247ENST00000641642 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
CASC19-247ENST00000641642 FMNL2Q96PY5 1086 aa13.34□□□□□ -0.27
CASC19-247ENST00000641642 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
CASC19-247ENST00000641642 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.27
CASC19-247ENST00000641642 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
CASC19-247ENST00000641642 TBC1D12O60347 775 aa13.33□□□□□ -0.28
CASC19-247ENST00000641642 CENPBP07199 599 aaPredicted RBP13.33□□□□□ -0.28
CASC19-247ENST00000641642 ACSBG1Q96GR2 724 aa13.33□□□□□ -0.28
CASC19-247ENST00000641642 ATG3Q9NT62 314 aa13.33□□□□□ -0.28
CASC19-247ENST00000641642 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
CASC19-247ENST00000641642 HRO43593 1189 aa13.32□□□□□ -0.28
CASC19-247ENST00000641642 SNRPA1P09661 255 aaKnown RBP13.32□□□□□ -0.28
CASC19-247ENST00000641642 CCDC125Q86Z20 511 aa13.32□□□□□ -0.28
CASC19-247ENST00000641642 TSR2Q969E8 191 aaKnown RBP13.32□□□□□ -0.28
CASC19-247ENST00000641642 MIS18AQ9NYP9 233 aa13.32□□□□□ -0.28
CASC19-247ENST00000641642 ZNF831Q5JPB2 1677 aa13.31□□□□□ -0.28
CASC19-247ENST00000641642 PLSCR1O15162 318 aa13.31□□□□□ -0.28
CASC19-247ENST00000641642 KCNQ2O43526 872 aa13.31□□□□□ -0.28
CASC19-247ENST00000641642 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
CASC19-247ENST00000641642 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
CASC19-247ENST00000641642 BTAF1O14981 1849 aa13.3□□□□□ -0.28
CASC19-247ENST00000641642 GIGYF1O75420 1035 aaPredicted RBP13.3□□□□□ -0.28
CASC19-247ENST00000641642 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
CASC19-247ENST00000641642 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
CASC19-247ENST00000641642 TWISTNBQ3B726 338 aaPredicted RBP13.3□□□□□ -0.28
CASC19-247ENST00000641642 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
CASC19-247ENST00000641642 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
CASC19-247ENST00000641642 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
CASC19-247ENST00000641642 CACNA1FO60840 1977 aa13.3□□□□□ -0.28
CASC19-247ENST00000641642 VAMP4O75379 141 aa13.29□□□□□ -0.28
CASC19-247ENST00000641642 PSEN2P49810 448 aa13.29□□□□□ -0.28
CASC19-247ENST00000641642 ALDH1L2Q3SY69 923 aa13.29□□□□□ -0.28
CASC19-247ENST00000641642 PALLDQ8WX93 1383 aa13.29□□□□□ -0.28
CASC19-247ENST00000641642 KCPQ6ZWJ8 1503 aa13.29□□□□□ -0.28
CASC19-247ENST00000641642 CICQ96RK0 1608 aaPredicted RBP13.28□□□□□ -0.28
CASC19-247ENST00000641642 LOC102724428A0A0B4J2F2 783 aa13.28□□□□□ -0.28
CASC19-247ENST00000641642 KCNQ3O43525 872 aa13.28□□□□□ -0.28
CASC19-247ENST00000641642 TRIM37O94972 964 aa13.28□□□□□ -0.28
CASC19-247ENST00000641642 SIK1P57059 783 aa13.28□□□□□ -0.28
CASC19-247ENST00000641642 SLC27A3Q5K4L6 730 aa13.28□□□□□ -0.28
CASC19-247ENST00000641642 C8orf58Q8NAV2 365 aa13.28□□□□□ -0.28
CASC19-247ENST00000641642 ERBB4Q15303 1308 aa13.28□□□□□ -0.28
CASC19-247ENST00000641642 STARD3NLO95772 234 aa13.27□□□□□ -0.29
CASC19-247ENST00000641642 BRPF1P55201 1214 aaPredicted RBP13.27□□□□□ -0.29
CASC19-247ENST00000641642 CCDC30Q5VVM6 783 aa13.27□□□□□ -0.29
CASC19-247ENST00000641642 LY75O60449 1722 aa13.27□□□□□ -0.29
CASC19-247ENST00000641642 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.29
CASC19-247ENST00000641642 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.29
CASC19-247ENST00000641642 PTCD1O75127 700 aaKnown RBP13.26□□□□□ -0.29
CASC19-247ENST00000641642 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
CASC19-247ENST00000641642 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
CASC19-247ENST00000641642 ATP6V1AP38606 617 aa13.25□□□□□ -0.29
CASC19-247ENST00000641642 TSPYL6Q8N831 410 aa13.25□□□□□ -0.29
CASC19-247ENST00000641642 RCAN3Q9UKA8 241 aa13.25□□□□□ -0.29
CASC19-247ENST00000641642 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
CASC19-247ENST00000641642 APBA3O96018 575 aa13.24□□□□□ -0.29
CASC19-247ENST00000641642 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
CASC19-247ENST00000641642 STK31Q9BXU1 1019 aa13.24□□□□□ -0.29
CASC19-247ENST00000641642 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
CASC19-247ENST00000641642 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
CASC19-247ENST00000641642 LAMB4A4D0S4 1761 aa13.24□□□□□ -0.29
CASC19-247ENST00000641642 TNS1Q9HBL0 1735 aaKnown RBP13.23□□□□□ -0.29
CASC19-247ENST00000641642 ELL2O00472 640 aaPredicted RBP13.23□□□□□ -0.29
CASC19-247ENST00000641642 BAG6P46379 1132 aa13.23□□□□□ -0.29
CASC19-247ENST00000641642 RARSP54136 660 aaKnown RBP13.23□□□□□ -0.29
CASC19-247ENST00000641642 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
CASC19-247ENST00000641642 RC3H1Q5TC82 1133 aaKnown RBP13.23□□□□□ -0.29
CASC19-247ENST00000641642 PTF1AQ7RTS3 328 aa13.23□□□□□ -0.29
CASC19-247ENST00000641642 CCNL1Q9UK58 526 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms