RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 FAM193AP78312 1265 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 BMP2KLQ5H9B9 411 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 GBP3Q9H0R5 595 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 ACEP12821 1306 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 TOP1P11387 765 aaKnown RBP13.88□□□□□ -0.19
MACF1-235ENST00000641104 FANCAO15360 1455 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 KIF5BP33176 963 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 CNNM3Q8NE01 707 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 DDX19AQ9NUU7 478 aaKnown RBP13.88□□□□□ -0.19
MACF1-235ENST00000641104 RPRD2Q5VT52 1461 aaKnown RBP13.88□□□□□ -0.19
MACF1-235ENST00000641104 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
MACF1-235ENST00000641104 PI4KAP2A4QPH2 592 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 PI4KAP1Q8N8J0 262 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 UBA5Q9GZZ9 404 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 BAG3O95817 575 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
MACF1-235ENST00000641104 DDX46Q7L014 1031 aaKnown RBP13.87□□□□□ -0.19
MACF1-235ENST00000641104 HMG20BQ9P0W2 317 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 BAG4O95429 457 aaKnown RBP13.87□□□□□ -0.19
MACF1-235ENST00000641104 UBE3BQ7Z3V4 1068 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 KIF5CO60282 957 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 PDE4BQ07343 736 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 SPTY2D1Q68D10 685 aaPredicted RBP13.87□□□□□ -0.19
MACF1-235ENST00000641104 CCDC102AQ96A19 550 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 IARSP41252 1262 aaKnown RBP13.87□□□□□ -0.19
MACF1-235ENST00000641104 DMRT2Q9Y5R5 561 aa13.87□□□□□ -0.19
MACF1-235ENST00000641104 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
MACF1-235ENST00000641104 TMEM67Q5HYA8 995 aa13.86□□□□□ -0.19
MACF1-235ENST00000641104 USP16Q9Y5T5 823 aa13.86□□□□□ -0.19
MACF1-235ENST00000641104 TBC1D9Q6ZT07 1266 aa13.86□□□□□ -0.19
MACF1-235ENST00000641104 FSIP1Q8NA03 581 aa13.86□□□□□ -0.19
MACF1-235ENST00000641104 UQCRFS1P1P0C7P4 283 aa13.86□□□□□ -0.19
MACF1-235ENST00000641104 SSFA2P28290 1259 aa13.86□□□□□ -0.19
MACF1-235ENST00000641104 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
MACF1-235ENST00000641104 TBC1D2Q9BYX2 928 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 GJB2P29033 226 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 NCOA7Q8NI08 942 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 NEK1Q96PY6 1258 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 PYM1Q9BRP8 204 aaKnown RBP13.85□□□□□ -0.19
MACF1-235ENST00000641104 AMPD3Q01432 767 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 MFSD6Q6ZSS7 791 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 ARHGAP45Q92619 1136 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 TCP11L1Q9NUJ3 509 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 CALML4Q96GE6 196 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 CLIP2Q9UDT6 1046 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 TTC21AQ8NDW8 1320 aa13.85□□□□□ -0.19
MACF1-235ENST00000641104 FAM83GA6ND36 823 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 TTC22Q5TAA0 569 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 ANKRD13DQ6ZTN6 518 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 PDCL2Q8N4E4 241 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 CRACR2AQ9BSW2 395 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 SNRKQ9NRH2 765 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 DISP3Q9P2K9 1392 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 TSPY2A6NKD2 308 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 STX6O43752 255 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 KAT14Q9H8E8 782 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 KIF18AQ8NI77 898 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 TNPO1Q92973 898 aaKnown RBP13.84□□□□□ -0.19
MACF1-235ENST00000641104 USO1O60763 962 aaKnown RBP13.84□□□□□ -0.19
MACF1-235ENST00000641104 YEATS4O95619 227 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 CCDC150Q8NCX0 1101 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 HLA-DOAP06340 250 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 TMCO3Q6UWJ1 677 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 CABP5Q9NP86 173 aa13.84□□□□□ -0.19
MACF1-235ENST00000641104 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.2
MACF1-235ENST00000641104 CASQ1P31415 396 aa13.83□□□□□ -0.2
MACF1-235ENST00000641104 ORC3Q9UBD5 711 aaPredicted RBP13.83□□□□□ -0.2
MACF1-235ENST00000641104 TNRQ92752 1358 aa13.83□□□□□ -0.2
MACF1-235ENST00000641104 METAP2P50579 478 aaKnown RBP eCLIP13.83□□□□□ -0.2
MACF1-235ENST00000641104 KIF4BQ2VIQ3 1234 aa13.83□□□□□ -0.2
MACF1-235ENST00000641104 CKAP2LQ8IYA6 745 aa13.83□□□□□ -0.2
MACF1-235ENST00000641104 NUP88Q99567 741 aaPredicted RBP13.83□□□□□ -0.2
MACF1-235ENST00000641104 CCDC152Q4G0S7 254 aa13.83□□□□□ -0.2
MACF1-235ENST00000641104 RALGAPBQ86X10 1494 aa13.83□□□□□ -0.2
MACF1-235ENST00000641104 NEMFO60524 1076 aa13.83□□□□□ -0.2
MACF1-235ENST00000641104 CETN1Q12798 172 aa13.83□□□□□ -0.2
MACF1-235ENST00000641104 MAP9Q49MG5 647 aa13.83□□□□□ -0.2
MACF1-235ENST00000641104 MCM3P25205 808 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 RFC4P35249 363 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 TTLL12Q14166 644 aaPredicted RBP13.82□□□□□ -0.2
MACF1-235ENST00000641104 WDR78Q5VTH9 848 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 KANK3Q6NY19 840 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 RHPN1Q8TCX5 695 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 FEZ1Q99689 392 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
MACF1-235ENST00000641104 GSTO1P78417 241 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 STX1AQ16623 288 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 SKAP1Q86WV1 359 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 CRNKL1Q9BZJ0 848 aaKnown RBP13.82□□□□□ -0.2
MACF1-235ENST00000641104 CALRP27797 417 aaKnown RBP13.82□□□□□ -0.2
MACF1-235ENST00000641104 MICU3Q86XE3 530 aa13.82□□□□□ -0.2
MACF1-235ENST00000641104 HAND2P61296 217 aa13.81□□□□□ -0.2
MACF1-235ENST00000641104 TDRD12Q587J7 1177 aaKnown RBP13.81□□□□□ -0.2
MACF1-235ENST00000641104 TAF3Q5VWG9 929 aa13.81□□□□□ -0.2
MACF1-235ENST00000641104 LARP6Q9BRS8 491 aaKnown RBP13.81□□□□□ -0.2
MACF1-235ENST00000641104 ZFYP08048 801 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms