RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
SCARB2-226ENST00000640916 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
SCARB2-226ENST00000640916 IQCA1LA6NCM1 817 aa11.34□□□□□ -0.59
SCARB2-226ENST00000640916 HSP90AB1P08238 724 aaKnown RBP11.34□□□□□ -0.59
SCARB2-226ENST00000640916 CYP19A1P11511 503 aaPredicted RBP11.34□□□□□ -0.59
SCARB2-226ENST00000640916 MCOLN1Q9GZU1 580 aa11.34□□□□□ -0.59
SCARB2-226ENST00000640916 TAOK3Q9H2K8 898 aa11.34□□□□□ -0.59
SCARB2-226ENST00000640916 COL15A1P39059 1388 aa11.33□□□□□ -0.6
SCARB2-226ENST00000640916 FMR1Q06787 632 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCARB2-226ENST00000640916 MAP1SQ66K74 1059 aaPredicted RBP11.33□□□□□ -0.6
SCARB2-226ENST00000640916 CNTROBQ8N137 903 aa11.33□□□□□ -0.6
SCARB2-226ENST00000640916 ZNF622Q969S3 477 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCARB2-226ENST00000640916 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
SCARB2-226ENST00000640916 TRPM7Q96QT4 1865 aa11.33□□□□□ -0.6
SCARB2-226ENST00000640916 ZNF541Q9H0D2 1346 aa11.33□□□□□ -0.6
SCARB2-226ENST00000640916 EAPPQ56P03 285 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-226ENST00000640916 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-226ENST00000640916 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
SCARB2-226ENST00000640916 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
SCARB2-226ENST00000640916 MTHFSP49914 203 aa11.31□□□□□ -0.6
SCARB2-226ENST00000640916 PLEKHO1Q53GL0 409 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-226ENST00000640916 MIER1Q8N108 512 aa11.31□□□□□ -0.6
SCARB2-226ENST00000640916 C7orf43Q8WVR3 580 aa11.31□□□□□ -0.6
SCARB2-226ENST00000640916 CAPNS2Q96L46 248 aa11.31□□□□□ -0.6
SCARB2-226ENST00000640916 BRIP1Q9BX63 1249 aa11.31□□□□□ -0.6
SCARB2-226ENST00000640916 ZBTB1Q9Y2K1 713 aa11.31□□□□□ -0.6
SCARB2-226ENST00000640916 EPHX2P34913 555 aa11.3□□□□□ -0.6
SCARB2-226ENST00000640916 TBC1D9BQ66K14 1250 aa11.3□□□□□ -0.6
SCARB2-226ENST00000640916 PRR5LQ6MZQ0 368 aa11.3□□□□□ -0.6
SCARB2-226ENST00000640916 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
SCARB2-226ENST00000640916 GPR101Q96P66 508 aaPredicted RBP11.3□□□□□ -0.6
SCARB2-226ENST00000640916 DDX21Q9NR30 783 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCARB2-226ENST00000640916 HACL1Q9UJ83 578 aa11.3□□□□□ -0.6
SCARB2-226ENST00000640916 ABT1Q9ULW3 272 aaKnown RBP11.3□□□□□ -0.6
SCARB2-226ENST00000640916 SCN7AQ01118 1682 aa11.3□□□□□ -0.6
SCARB2-226ENST00000640916 PDE6BP35913 854 aa11.29□□□□□ -0.6
SCARB2-226ENST00000640916 CST9Q5W186 159 aa11.29□□□□□ -0.6
SCARB2-226ENST00000640916 PRPF40BQ6NWY9 871 aaKnown RBP11.29□□□□□ -0.6
SCARB2-226ENST00000640916 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
SCARB2-226ENST00000640916 PLCD3Q8N3E9 789 aa11.29□□□□□ -0.6
SCARB2-226ENST00000640916 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
SCARB2-226ENST00000640916 UBR2Q8IWV8 1755 aa11.28□□□□□ -0.6
SCARB2-226ENST00000640916 AOC2O75106 756 aa11.28□□□□□ -0.6
SCARB2-226ENST00000640916 SRGNP10124 158 aa11.28□□□□□ -0.6
SCARB2-226ENST00000640916 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
SCARB2-226ENST00000640916 RNF123Q5XPI4 1314 aa11.28□□□□□ -0.6
SCARB2-226ENST00000640916 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.61
SCARB2-226ENST00000640916 SLC39A6Q13433 755 aa11.27□□□□□ -0.61
SCARB2-226ENST00000640916 AMOTQ4VCS5 1084 aa11.27□□□□□ -0.61
SCARB2-226ENST00000640916 STYK1Q6J9G0 422 aa11.27□□□□□ -0.61
SCARB2-226ENST00000640916 PNMA8AQ86V59 439 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-226ENST00000640916 AEBP1Q8IUX7 1158 aa11.27□□□□□ -0.61
SCARB2-226ENST00000640916 CNKSR1Q969H4 720 aa11.27□□□□□ -0.61
SCARB2-226ENST00000640916 MRC1P22897 1456 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 FZD9O00144 591 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 MAP2K2P36507 400 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 ECE1P42892 770 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 DGKZQ13574 1117 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 OLFM4Q6UX06 510 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 BEGAINQ9BUH8 593 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 LGR6Q9HBX8 967 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 ZNF277Q9NRM2 450 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-226ENST00000640916 FARP1Q9Y4F1 1045 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-226ENST00000640916 TLL2Q9Y6L7 1015 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 COL4A5P29400 1685 aa11.26□□□□□ -0.61
SCARB2-226ENST00000640916 NUBP1P53384 320 aa11.25□□□□□ -0.61
SCARB2-226ENST00000640916 SLC52A2Q9HAB3 445 aa11.25□□□□□ -0.61
SCARB2-226ENST00000640916 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
SCARB2-226ENST00000640916 BCORQ6W2J9 1755 aa11.24□□□□□ -0.61
SCARB2-226ENST00000640916 TRAF5O00463 557 aa11.24□□□□□ -0.61
SCARB2-226ENST00000640916 CANXP27824 592 aaKnown RBP11.24□□□□□ -0.61
SCARB2-226ENST00000640916 FKBP4Q02790 459 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCARB2-226ENST00000640916 GRM1Q13255 1194 aa11.24□□□□□ -0.61
SCARB2-226ENST00000640916 C1orf141Q5JVX7 400 aa11.24□□□□□ -0.61
SCARB2-226ENST00000640916 SOGA3Q5TF21 947 aa11.24□□□□□ -0.61
SCARB2-226ENST00000640916 PRPF38BQ5VTL8 546 aaKnown RBP11.24□□□□□ -0.61
SCARB2-226ENST00000640916 MASTLQ96GX5 879 aa11.24□□□□□ -0.61
SCARB2-226ENST00000640916 SOX10P56693 466 aa11.23□□□□□ -0.61
SCARB2-226ENST00000640916 CCDC93Q567U6 631 aa11.23□□□□□ -0.61
SCARB2-226ENST00000640916 PAXIP1Q6ZW49 1069 aaPredicted RBP11.23□□□□□ -0.61
SCARB2-226ENST00000640916 GPC2Q8N158 579 aa11.23□□□□□ -0.61
SCARB2-226ENST00000640916 CA12O43570 354 aa11.22□□□□□ -0.61
SCARB2-226ENST00000640916 EPS15P42566 896 aa11.22□□□□□ -0.61
SCARB2-226ENST00000640916 SAPCD2Q86UD0 394 aa11.22□□□□□ -0.61
SCARB2-226ENST00000640916 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
SCARB2-226ENST00000640916 ZIC5Q96T25 663 aa11.22□□□□□ -0.61
SCARB2-226ENST00000640916 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
SCARB2-226ENST00000640916 KLRG2A4D1S0 409 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-226ENST00000640916 RNMTO43148 476 aaKnown RBP11.21□□□□□ -0.61
SCARB2-226ENST00000640916 IARSP41252 1262 aaKnown RBP11.21□□□□□ -0.61
SCARB2-226ENST00000640916 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-226ENST00000640916 SCNN1DP51172 638 aa11.21□□□□□ -0.61
SCARB2-226ENST00000640916 BRPF1P55201 1214 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-226ENST00000640916 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-226ENST00000640916 CAMTA2O94983 1202 aa11.2□□□□□ -0.62
SCARB2-226ENST00000640916 AKAP4Q5JQC9 854 aa11.2□□□□□ -0.62
SCARB2-226ENST00000640916 CIAPIN1Q6FI81 312 aa11.2□□□□□ -0.62
SCARB2-226ENST00000640916 SYNE4Q8N205 404 aa11.2□□□□□ -0.62
SCARB2-226ENST00000640916 CNBD1Q8NA66 436 aa11.2□□□□□ -0.62
SCARB2-226ENST00000640916 A0A087WZG4 1122 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms