RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 SSH3Q8TE77 659 aa18.48■□□□□ 0.55
PAX6-277ENST00000640735 LTV1Q96GA3 475 aaPredicted RBP18.48■□□□□ 0.55
PAX6-277ENST00000640735 MX1P20591 662 aa18.48■□□□□ 0.55
PAX6-277ENST00000640735 HDGFL1Q5TGJ6 251 aa18.48■□□□□ 0.55
PAX6-277ENST00000640735 LRRFIP2Q9Y608 721 aaKnown RBP18.48■□□□□ 0.55
PAX6-277ENST00000640735 AFF2P51816 1311 aa18.47■□□□□ 0.55
PAX6-277ENST00000640735 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
PAX6-277ENST00000640735 FNBP4Q8N3X1 1017 aaPredicted RBP18.47■□□□□ 0.55
PAX6-277ENST00000640735 EPB41L2O43491 1005 aaKnown RBP18.46■□□□□ 0.55
PAX6-277ENST00000640735 BAG4O95429 457 aaKnown RBP18.46■□□□□ 0.55
PAX6-277ENST00000640735 POLA2Q14181 598 aa18.46■□□□□ 0.55
PAX6-277ENST00000640735 NBPF6Q5VWK0 638 aa18.46■□□□□ 0.55
PAX6-277ENST00000640735 ANKRD24Q8TF21 1146 aa18.46■□□□□ 0.55
PAX6-277ENST00000640735 NBPF4Q96M43 638 aa18.46■□□□□ 0.55
PAX6-277ENST00000640735 ESYT1Q9BSJ8 1104 aa18.46■□□□□ 0.55
PAX6-277ENST00000640735 STRN4Q9NRL3 753 aa18.46■□□□□ 0.55
PAX6-277ENST00000640735 RAB11FIP3O75154 756 aa18.46■□□□□ 0.55
PAX6-277ENST00000640735 EVA1CP58658 441 aa18.46■□□□□ 0.55
PAX6-277ENST00000640735 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.55
PAX6-277ENST00000640735 ERBB3P21860 1342 aa18.45■□□□□ 0.54
PAX6-277ENST00000640735 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.45■□□□□ 0.54
PAX6-277ENST00000640735 USP21Q9UK80 565 aa18.45■□□□□ 0.54
PAX6-277ENST00000640735 GOLGA6L22H0YM25 854 aa18.45■□□□□ 0.54
PAX6-277ENST00000640735 UBTFL1P0CB47 393 aaPredicted RBP18.45■□□□□ 0.54
PAX6-277ENST00000640735 CSB-PGBD3P0DP91 1061 aa18.45■□□□□ 0.54
PAX6-277ENST00000640735 USHBP1Q8N6Y0 703 aa18.45■□□□□ 0.54
PAX6-277ENST00000640735 GRPEL1Q9HAV7 217 aa18.45■□□□□ 0.54
PAX6-277ENST00000640735 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
PAX6-277ENST00000640735 CHMLP26374 656 aa18.44■□□□□ 0.54
PAX6-277ENST00000640735 ANAPC15P60006 121 aa18.44■□□□□ 0.54
PAX6-277ENST00000640735 UNC5CLQ8IV45 518 aa18.44■□□□□ 0.54
PAX6-277ENST00000640735 PHAXQ9H814 394 aaKnown RBP18.43■□□□□ 0.54
PAX6-277ENST00000640735 WDR17Q8IZU2 1322 aa18.43■□□□□ 0.54
PAX6-277ENST00000640735 MCM2P49736 904 aa18.43■□□□□ 0.54
PAX6-277ENST00000640735 KLHL40Q2TBA0 621 aa18.43■□□□□ 0.54
PAX6-277ENST00000640735 AKAP4Q5JQC9 854 aa18.43■□□□□ 0.54
PAX6-277ENST00000640735 RGPD2P0DJD1 1756 aa18.42■□□□□ 0.54
PAX6-277ENST00000640735 LARP1Q6PKG0 1096 aaKnown RBP18.42■□□□□ 0.54
PAX6-277ENST00000640735 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
PAX6-277ENST00000640735 PANK2Q9BZ23 570 aa18.42■□□□□ 0.54
PAX6-277ENST00000640735 AMOTQ4VCS5 1084 aa18.41■□□□□ 0.54
PAX6-277ENST00000640735 PLEKHO1Q53GL0 409 aaPredicted RBP18.41■□□□□ 0.54
PAX6-277ENST00000640735 BEND3Q5T5X7 828 aa18.41■□□□□ 0.54
PAX6-277ENST00000640735 TOM1L2Q6ZVM7 507 aa18.4■□□□□ 0.54
PAX6-277ENST00000640735 MCCP23508 829 aa18.4■□□□□ 0.54
PAX6-277ENST00000640735 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
PAX6-277ENST00000640735 GAS2L3Q86XJ1 694 aa18.4■□□□□ 0.54
PAX6-277ENST00000640735 NLRP2Q9NX02 1062 aa18.4■□□□□ 0.54
PAX6-277ENST00000640735 AK9Q5TCS8 1911 aa18.4■□□□□ 0.54
PAX6-277ENST00000640735 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
PAX6-277ENST00000640735 TSHZ3Q63HK5 1081 aa18.39■□□□□ 0.53
PAX6-277ENST00000640735 CUL4AQ13619 759 aa18.38■□□□□ 0.53
PAX6-277ENST00000640735 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
PAX6-277ENST00000640735 DNAAF4Q8WXU2 420 aa18.38■□□□□ 0.53
PAX6-277ENST00000640735 ATRNO75882 1429 aa18.38■□□□□ 0.53
PAX6-277ENST00000640735 VPS72Q15906 364 aa18.38■□□□□ 0.53
PAX6-277ENST00000640735 ZDHHC9Q9Y397 364 aa18.38■□□□□ 0.53
PAX6-277ENST00000640735 RNMTO43148 476 aaKnown RBP18.37■□□□□ 0.53
PAX6-277ENST00000640735 ZNF530Q6P9A1 599 aaPredicted RBP18.37■□□□□ 0.53
PAX6-277ENST00000640735 ZGPATQ8N5A5 531 aaKnown RBP18.37■□□□□ 0.53
PAX6-277ENST00000640735 RRAGDQ9NQL2 400 aaPredicted RBP18.37■□□□□ 0.53
PAX6-277ENST00000640735 CHPF2Q9P2E5 772 aa18.37■□□□□ 0.53
PAX6-277ENST00000640735 USP42Q9H9J4 1324 aaKnown RBP18.37■□□□□ 0.53
PAX6-277ENST00000640735 ADAMTS7Q9UKP4 1686 aa18.37■□□□□ 0.53
PAX6-277ENST00000640735 KCNQ3O43525 872 aa18.37■□□□□ 0.53
PAX6-277ENST00000640735 MTX1Q13505 466 aa18.37■□□□□ 0.53
PAX6-277ENST00000640735 RHPN1Q8TCX5 695 aa18.37■□□□□ 0.53
PAX6-277ENST00000640735 KIF1BPQ96EK5 621 aa18.37■□□□□ 0.53
PAX6-277ENST00000640735 LMBRD1Q9NUN5 540 aa18.37■□□□□ 0.53
PAX6-277ENST00000640735 BCCIPQ9P287 314 aaKnown RBP eCLIP18.37■□□□□ 0.53
PAX6-277ENST00000640735 TRPC5Q9UL62 973 aaPredicted RBP18.37■□□□□ 0.53
PAX6-277ENST00000640735 ADCY9O60503 1353 aa18.36■□□□□ 0.53
PAX6-277ENST00000640735 BTBD11A6QL63 1104 aa18.36■□□□□ 0.53
PAX6-277ENST00000640735 EIF2S2P20042 333 aaKnown RBP18.36■□□□□ 0.53
PAX6-277ENST00000640735 TEFQ10587 303 aa18.36■□□□□ 0.53
PAX6-277ENST00000640735 PI4K2BQ8TCG2 481 aa18.36■□□□□ 0.53
PAX6-277ENST00000640735 CARD10Q9BWT7 1032 aa18.36■□□□□ 0.53
PAX6-277ENST00000640735 SPATA31A5Q5VU36 1347 aa18.36■□□□□ 0.53
PAX6-277ENST00000640735 SPATA31A7Q8IWB4 1347 aa18.36■□□□□ 0.53
PAX6-277ENST00000640735 TRIM6-TRIM34B2RNG4 842 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 SURF6O75683 361 aaKnown RBP18.35■□□□□ 0.53
PAX6-277ENST00000640735 NEK4P51957 841 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 HSP90AB4PQ58FF6 505 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 INTS4Q96HW7 963 aaKnown RBP18.35■□□□□ 0.53
PAX6-277ENST00000640735 TMX3Q96JJ7 454 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 QTRT2Q9H974 415 aaKnown RBP18.35■□□□□ 0.53
PAX6-277ENST00000640735 SPATA31A1Q5TZJ5 1347 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
PAX6-277ENST00000640735 PI4KAP2A4QPH2 592 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 NBPF7P0C2Y1 421 aaPredicted RBP18.35■□□□□ 0.53
PAX6-277ENST00000640735 ZNF445P59923 1031 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 PKP1Q13835 747 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 PI4KAP1Q8N8J0 262 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 RILPL2Q969X0 211 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 RGS17Q9UGC6 210 aaPredicted RBP18.35■□□□□ 0.53
PAX6-277ENST00000640735 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
PAX6-277ENST00000640735 DDX49Q9Y6V7 483 aaKnown RBP18.35■□□□□ 0.53
PAX6-277ENST00000640735 ALDH1L1O75891 902 aa18.34■□□□□ 0.53
PAX6-277ENST00000640735 DBF4Q9UBU7 674 aaPredicted RBP18.34■□□□□ 0.53
PAX6-277ENST00000640735 IL1RAPL2Q9NP60 686 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms