RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 NGEFQ8N5V2 710 aa18.93■□□□□ 0.62
HNRNPU-229ENST00000640440 TTLL6Q8N841 843 aa18.93■□□□□ 0.62
HNRNPU-229ENST00000640440 BRIP1Q9BX63 1249 aa18.93■□□□□ 0.62
HNRNPU-229ENST00000640440 SLX4Q8IY92 1834 aa18.93■□□□□ 0.62
HNRNPU-229ENST00000640440 PDE6BP35913 854 aa18.92■□□□□ 0.62
HNRNPU-229ENST00000640440 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
HNRNPU-229ENST00000640440 ST5P78524 1137 aa18.92■□□□□ 0.62
HNRNPU-229ENST00000640440 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
HNRNPU-229ENST00000640440 FER1L6Q2WGJ9 1857 aa18.91■□□□□ 0.62
HNRNPU-229ENST00000640440 NBPF5PQ86XG9 351 aaPredicted RBP18.91■□□□□ 0.62
HNRNPU-229ENST00000640440 ZNF622Q969S3 477 aaKnown RBP eCLIP18.91■□□□□ 0.622e-18■■□□□ 13
HNRNPU-229ENST00000640440 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
HNRNPU-229ENST00000640440 NIP7Q9Y221 180 aaKnown RBP eCLIP18.91■□□□□ 0.62
HNRNPU-229ENST00000640440 SENP3-EIF4A1A0A087X0R7 540 aa18.9■□□□□ 0.62
HNRNPU-229ENST00000640440 MYL6BP14649 208 aa18.9■□□□□ 0.62
HNRNPU-229ENST00000640440 RASSF7Q02833 373 aa18.9■□□□□ 0.62
HNRNPU-229ENST00000640440 HLFQ16534 295 aa18.9■□□□□ 0.62
HNRNPU-229ENST00000640440 RNF181Q9P0P0 153 aa18.9■□□□□ 0.62
HNRNPU-229ENST00000640440 PDZRN3Q9UPQ7 1066 aa18.9■□□□□ 0.62
HNRNPU-229ENST00000640440 TIAM2Q8IVF5 1701 aa18.89■□□□□ 0.61
HNRNPU-229ENST00000640440 RGL2O15211 777 aa18.89■□□□□ 0.61
HNRNPU-229ENST00000640440 DICER1Q9UPY3 1922 aaKnown RBP18.89■□□□□ 0.61
HNRNPU-229ENST00000640440 KIF6Q6ZMV9 814 aa18.88■□□□□ 0.61
HNRNPU-229ENST00000640440 PIAS4Q8N2W9 510 aaPredicted RBP18.88■□□□□ 0.61
HNRNPU-229ENST00000640440 BABAM1Q9NWV8 329 aa18.88■□□□□ 0.61
HNRNPU-229ENST00000640440 FAM177BA6PVY3 158 aa18.87■□□□□ 0.61
HNRNPU-229ENST00000640440 ERBB4Q15303 1308 aa18.87■□□□□ 0.61
HNRNPU-229ENST00000640440 MAP3K15Q6ZN16 1313 aa18.87■□□□□ 0.61
HNRNPU-229ENST00000640440 TTLL7Q6ZT98 887 aa18.87■□□□□ 0.61
HNRNPU-229ENST00000640440 TRIM35Q9UPQ4 493 aa18.87■□□□□ 0.61
HNRNPU-229ENST00000640440 TNRC6CQ9HCJ0 1690 aaKnown RBP18.86■□□□□ 0.61
HNRNPU-229ENST00000640440 KIF3CO14782 793 aa18.86■□□□□ 0.61
HNRNPU-229ENST00000640440 EIF2S2P20042 333 aaKnown RBP18.86■□□□□ 0.61
HNRNPU-229ENST00000640440 ZNF219Q9P2Y4 722 aaPredicted RBP18.86■□□□□ 0.61
HNRNPU-229ENST00000640440 LAS1LQ9Y4W2 734 aaKnown RBP18.86■□□□□ 0.61
HNRNPU-229ENST00000640440 ERVV-1B6SEH8 477 aa18.85■□□□□ 0.61
HNRNPU-229ENST00000640440 SRGNP10124 158 aa18.85■□□□□ 0.61
HNRNPU-229ENST00000640440 STYK1Q6J9G0 422 aa18.85■□□□□ 0.61
HNRNPU-229ENST00000640440 TPTE2Q6XPS3 522 aa18.85■□□□□ 0.61
HNRNPU-229ENST00000640440 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
HNRNPU-229ENST00000640440 ANKRD36CQ5JPF3 1778 aa18.85■□□□□ 0.61
HNRNPU-229ENST00000640440 CNKSR1Q969H4 720 aa18.84■□□□□ 0.61
HNRNPU-229ENST00000640440 MASTLQ96GX5 879 aa18.84■□□□□ 0.61
HNRNPU-229ENST00000640440 NMRK2Q9NPI5 230 aa18.84■□□□□ 0.61
HNRNPU-229ENST00000640440 CEP350Q5VT06 3117 aa18.84■□□□□ 0.61
HNRNPU-229ENST00000640440 NFKBIEO00221 500 aa18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 CHL1O00533 1208 aa18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 C21orf2O43822 256 aa18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 ANXA1P04083 346 aa18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 LMNB1P20700 586 aa18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 PRELPP51888 382 aa18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 KRT24Q2M2I5 525 aa18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 PROSER3Q2NL68 480 aa18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 NECTIN2Q92692 538 aa18.83■□□□□ 0.6
HNRNPU-229ENST00000640440 GPTP24298 496 aa18.82■□□□□ 0.6
HNRNPU-229ENST00000640440 GTF2E1P29083 439 aaPredicted RBP18.82■□□□□ 0.6
HNRNPU-229ENST00000640440 PDIA6Q15084 440 aa18.82■□□□□ 0.6
HNRNPU-229ENST00000640440 ABCC12Q96J65 1359 aa18.81■□□□□ 0.6
HNRNPU-229ENST00000640440 LRP10Q7Z4F1 713 aa18.81■□□□□ 0.6
HNRNPU-229ENST00000640440 UBN2Q6ZU65 1347 aa18.8■□□□□ 0.6
HNRNPU-229ENST00000640440 APAF1O14727 1248 aa18.8■□□□□ 0.6
HNRNPU-229ENST00000640440 NPR1P16066 1061 aa18.8■□□□□ 0.6
HNRNPU-229ENST00000640440 NUTM1Q86Y26 1132 aa18.8■□□□□ 0.6
HNRNPU-229ENST00000640440 NYXQ9GZU5 481 aa18.8■□□□□ 0.6
HNRNPU-229ENST00000640440 KDM2BQ8NHM5 1336 aa18.79■□□□□ 0.6
HNRNPU-229ENST00000640440 ZC3H4Q9UPT8 1303 aaKnown RBP18.79■□□□□ 0.6
HNRNPU-229ENST00000640440 KLRG2A4D1S0 409 aaPredicted RBP18.79■□□□□ 0.6
HNRNPU-229ENST00000640440 GIGYF2Q6Y7W6 1299 aaKnown RBP18.79■□□□□ 0.6
HNRNPU-229ENST00000640440 IBTKQ9P2D0 1353 aaPredicted RBP18.79■□□□□ 0.6
HNRNPU-229ENST00000640440 ERFEQ4G0M1 354 aa18.78■□□□□ 0.6
HNRNPU-229ENST00000640440 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
HNRNPU-229ENST00000640440 TAOK3Q9H2K8 898 aa18.78■□□□□ 0.6
HNRNPU-229ENST00000640440 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.6
HNRNPU-229ENST00000640440 AIMP1Q12904 312 aaKnown RBP18.77■□□□□ 0.6
HNRNPU-229ENST00000640440 SUSD4Q5VX71 490 aa18.77■□□□□ 0.6
HNRNPU-229ENST00000640440 ZNF34Q8IZ26 560 aa18.77■□□□□ 0.6
HNRNPU-229ENST00000640440 XAGE3Q8WTP9 111 aa18.77■□□□□ 0.6
HNRNPU-229ENST00000640440 CFAP44Q96MT7 982 aa18.77■□□□□ 0.6
HNRNPU-229ENST00000640440 LAMB2P55268 1798 aa18.77■□□□□ 0.6
HNRNPU-229ENST00000640440 SOGA3Q5TF21 947 aa18.76■□□□□ 0.59
HNRNPU-229ENST00000640440 COPS6Q7L5N1 327 aa18.76■□□□□ 0.59
HNRNPU-229ENST00000640440 DDX21Q9NR30 783 aaKnown RBP eCLIP18.76■□□□□ 0.59
HNRNPU-229ENST00000640440 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
HNRNPU-229ENST00000640440 CHPF2Q9P2E5 772 aa18.76■□□□□ 0.59
HNRNPU-229ENST00000640440 LTBP3Q9NS15 1303 aa18.75■□□□□ 0.59
HNRNPU-229ENST00000640440 TOMM70O94826 608 aa18.75■□□□□ 0.59
HNRNPU-229ENST00000640440 HDGFL1Q5TGJ6 251 aa18.75■□□□□ 0.59
HNRNPU-229ENST00000640440 RRAGCQ9HB90 399 aa18.75■□□□□ 0.59
HNRNPU-229ENST00000640440 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 NTSR2O95665 410 aa18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 HOXB7P09629 217 aa18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 HSPA6P17066 643 aa18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 CRY2Q49AN0 593 aa18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 PARP10Q53GL7 1025 aa18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 DUSP27Q5VZP5 1158 aa18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 C16orf71Q8IYS4 520 aaPredicted RBP18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 C7orf43Q8WVR3 580 aa18.74■□□□□ 0.59
HNRNPU-229ENST00000640440 ZNF853P0CG23 659 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms