RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 C6orf229H3BNL8 230 aa17.06■□□□□ 0.32
HNRNPU-226ENST00000640218 CASQ1P31415 396 aa17.06■□□□□ 0.32
HNRNPU-226ENST00000640218 IDI1Q13907 227 aa17.06■□□□□ 0.32
HNRNPU-226ENST00000640218 SLF2Q8IX21 1173 aa17.06■□□□□ 0.32
HNRNPU-226ENST00000640218 ZSCAN12O43309 604 aa17.06■□□□□ 0.32
HNRNPU-226ENST00000640218 SNRKQ9NRH2 765 aa17.06■□□□□ 0.32
HNRNPU-226ENST00000640218 ABCC5O15440 1437 aa17.06■□□□□ 0.32
HNRNPU-226ENST00000640218 LDHAL6AQ6ZMR3 332 aa17.06■□□□□ 0.32
HNRNPU-226ENST00000640218 BEGAINQ9BUH8 593 aa17.06■□□□□ 0.32
HNRNPU-226ENST00000640218 KIF5CO60282 957 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 PLB1Q6P1J6 1458 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 FSIP1Q8NA03 581 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 TTC16Q8NEE8 873 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 FAM83GA6ND36 823 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 CPLX3Q8WVH0 158 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 LRPPRCP42704 1394 aaKnown RBP17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 GJB2P29033 226 aa17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 FGFR1OPO95684 399 aaKnown RBP17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 JARID2Q92833 1246 aaPredicted RBP17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 TFIP11Q9UBB9 837 aaKnown RBP17.05■□□□□ 0.32
HNRNPU-226ENST00000640218 DNA2P51530 1060 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 TSHZ3Q63HK5 1081 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 HAND2P61296 217 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 VAT1LQ9HCJ6 419 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 TMEM67Q5HYA8 995 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 CRACR2AQ9BSW2 395 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 TTC21BQ7Z4L5 1316 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 KIF4BQ2VIQ3 1234 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 GDPD2Q9HCC8 539 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 VPS36Q86VN1 386 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
HNRNPU-226ENST00000640218 CTAGE5O15320 804 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 URI1O94763 535 aaPredicted RBP17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 TTF1Q15361 905 aaPredicted RBP17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 NOS1P29475 1434 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 TBC1D9Q6ZT07 1266 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 CCDC97Q96F63 343 aaPredicted RBP17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 LIG1P18858 919 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 TNPO1Q92973 898 aaKnown RBP17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 TMX1Q9H3N1 280 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 CCDC113Q9H0I3 377 aa17.03■□□□□ 0.32
HNRNPU-226ENST00000640218 TRMT1LQ7Z2T5 733 aaKnown RBP17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 PPP1R42Q7Z4L9 355 aa17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 RAB11FIP4Q86YS3 637 aa17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 PDCL2Q8N4E4 241 aa17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 BIN1O00499 593 aa17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 TMCO3Q6UWJ1 677 aa17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 CDC5LQ99459 802 aaKnown RBP17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 KIF2AO00139 706 aaPredicted RBP17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 PPFIA3O75145 1194 aa17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 HMGXB3Q12766 1538 aa17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 ERICH4A6NGS2 130 aa17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 TDRD12Q587J7 1177 aaKnown RBP17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 DNAI2Q9GZS0 605 aa17.02■□□□□ 0.32
HNRNPU-226ENST00000640218 BAG4O95429 457 aaKnown RBP17.02■□□□□ 0.31
HNRNPU-226ENST00000640218 PRKCSHP14314 528 aaPredicted RBP17.02■□□□□ 0.31
HNRNPU-226ENST00000640218 EHMT1Q9H9B1 1298 aa17.02■□□□□ 0.31
HNRNPU-226ENST00000640218 IARSP41252 1262 aaKnown RBP17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 KIF18AQ8NI77 898 aa17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 TSPY2A6NKD2 308 aa17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 NBPF14Q5TI25 921 aa17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 ANAPC15P60006 121 aa17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 GBP3Q9H0R5 595 aa17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 TEX13AQ9BXU3 409 aaPredicted RBP17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 PANK2Q9BZ23 570 aa17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 POLD1P28340 1107 aa17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 TRMT1Q9NXH9 659 aaKnown RBP17.01■□□□□ 0.31
HNRNPU-226ENST00000640218 ANKRD24Q8TF21 1146 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 USP25Q9UHP3 1055 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 ANXA1P04083 346 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 LUZP1Q86V48 1076 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 DYDC1Q8WWB3 177 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 SCAF11Q99590 1463 aaKnown RBP17■□□□□ 0.31
HNRNPU-226ENST00000640218 PIK3R4Q99570 1358 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 STX6O43752 255 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 CALML4Q96GE6 196 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 KAT14Q9H8E8 782 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 MTIF2P46199 727 aaKnown RBP17■□□□□ 0.31
HNRNPU-226ENST00000640218 CTNNBL1Q8WYA6 563 aaPredicted RBP17■□□□□ 0.31
HNRNPU-226ENST00000640218 NEK1Q96PY6 1258 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 GOPCQ9HD26 462 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 CCDC150Q8NCX0 1101 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 ACSBG1Q96GR2 724 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms