RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 PLCG2P16885 1265 aa8.59□□□□□ -1.03
PRKCH-228ENST00000640011 LMNB1P20700 586 aa8.59□□□□□ -1.03
PRKCH-228ENST00000640011 CABP4P57796 275 aa8.59□□□□□ -1.03
PRKCH-228ENST00000640011 PLEKHO1Q53GL0 409 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-228ENST00000640011 GPHNQ9NQX3 736 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-228ENST00000640011 BOLA1Q9Y3E2 137 aa8.59□□□□□ -1.03
PRKCH-228ENST00000640011 USP42Q9H9J4 1324 aaKnown RBP8.58□□□□□ -1.04
PRKCH-228ENST00000640011 KIAA1551Q9HCM1 1747 aa8.58□□□□□ -1.04
PRKCH-228ENST00000640011 ZPR1O75312 459 aa8.58□□□□□ -1.04
PRKCH-228ENST00000640011 SP7Q8TDD2 431 aaPredicted RBP8.58□□□□□ -1.04
PRKCH-228ENST00000640011 TNRC6CQ9HCJ0 1690 aaKnown RBP8.58□□□□□ -1.04
PRKCH-228ENST00000640011 CRKLP46109 303 aaKnown RBP8.57□□□□□ -1.04
PRKCH-228ENST00000640011 CAMK2BQ13554 666 aa8.57□□□□□ -1.04
PRKCH-228ENST00000640011 C1orf141Q5JVX7 400 aa8.57□□□□□ -1.04
PRKCH-228ENST00000640011 SLC4A9Q96Q91 983 aa8.57□□□□□ -1.04
PRKCH-228ENST00000640011 PDZRN3Q9UPQ7 1066 aa8.57□□□□□ -1.04
PRKCH-228ENST00000640011 N4BP2Q86UW6 1770 aaPredicted RBP8.57□□□□□ -1.04
PRKCH-228ENST00000640011 ARFGEF1Q9Y6D6 1849 aa8.57□□□□□ -1.04
PRKCH-228ENST00000640011 KDM6AO15550 1401 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-228ENST00000640011 POLRMTO00411 1230 aaKnown RBP8.56□□□□□ -1.04
PRKCH-228ENST00000640011 MTHFSP49914 203 aa8.56□□□□□ -1.04
PRKCH-228ENST00000640011 EIF4A2Q14240 407 aaKnown RBP8.56□□□□□ -1.04
PRKCH-228ENST00000640011 TTLL6Q8N841 843 aa8.56□□□□□ -1.04
PRKCH-228ENST00000640011 POLKQ9UBT6 870 aa8.56□□□□□ -1.04
PRKCH-228ENST00000640011 KIF20BQ96Q89 1820 aa8.55□□□□□ -1.04
PRKCH-228ENST00000640011 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
PRKCH-228ENST00000640011 TM4SF1P30408 202 aa8.55□□□□□ -1.04
PRKCH-228ENST00000640011 CHRNA5P30532 468 aa8.55□□□□□ -1.04
PRKCH-228ENST00000640011 DDR1Q08345 913 aa8.55□□□□□ -1.04
PRKCH-228ENST00000640011 DSG2Q14126 1118 aa8.55□□□□□ -1.04
PRKCH-228ENST00000640011 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
PRKCH-228ENST00000640011 ZNF530Q6P9A1 599 aaPredicted RBP8.55□□□□□ -1.04
PRKCH-228ENST00000640011 SLC39A7Q92504 469 aa8.55□□□□□ -1.04
PRKCH-228ENST00000640011 CARD14Q9BXL6 1004 aa8.55□□□□□ -1.04
PRKCH-228ENST00000640011 BRCA1P38398 1863 aaKnown RBP8.55□□□□□ -1.04
PRKCH-228ENST00000640011 TMEM92Q6UXU6 159 aa8.54□□□□□ -1.04
PRKCH-228ENST00000640011 PRDM10Q9NQV6 1147 aa8.54□□□□□ -1.04
PRKCH-228ENST00000640011 SRP68Q9UHB9 627 aaKnown RBP8.54□□□□□ -1.04
PRKCH-228ENST00000640011 ANKRD26Q9UPS8 1709 aa8.54□□□□□ -1.04
PRKCH-228ENST00000640011 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 H0YIN7 160 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 SEMA3EO15041 775 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 SEC24BO95487 1268 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 C7P10643 843 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 RASSF7Q02833 373 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 USPL1Q5W0Q7 1092 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 NFATC2IPQ8NCF5 419 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 AIDAQ96BJ3 306 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 EMILIN3Q9NT22 766 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 NARFQ9UHQ1 456 aa8.53□□□□□ -1.04
PRKCH-228ENST00000640011 ARIH1Q9Y4X5 557 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-228ENST00000640011 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-228ENST00000640011 IQCA1LA6NCM1 817 aa8.52□□□□□ -1.05
PRKCH-228ENST00000640011 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRKCH-228ENST00000640011 METRNQ9UJH8 293 aa8.52□□□□□ -1.05
PRKCH-228ENST00000640011 SOS1Q07889 1333 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-228ENST00000640011 SERPINB2P05120 415 aa8.51□□□□□ -1.05
PRKCH-228ENST00000640011 PDE6BP35913 854 aa8.51□□□□□ -1.05
PRKCH-228ENST00000640011 CTCFP49711 727 aaPredicted RBP8.51□□□□□ -1.05
PRKCH-228ENST00000640011 FOXK1P85037 733 aa8.51□□□□□ -1.05
PRKCH-228ENST00000640011 NFIXQ14938 502 aa8.51□□□□□ -1.05
PRKCH-228ENST00000640011 ERFEQ4G0M1 354 aa8.51□□□□□ -1.05
PRKCH-228ENST00000640011 AKAP4Q5JQC9 854 aa8.51□□□□□ -1.05
PRKCH-228ENST00000640011 SOGA3Q5TF21 947 aa8.51□□□□□ -1.05
PRKCH-228ENST00000640011 INTS5Q6P9B9 1019 aaKnown RBP8.51□□□□□ -1.05
PRKCH-228ENST00000640011 TMC2Q8TDI7 906 aa8.51□□□□□ -1.05
PRKCH-228ENST00000640011 L3MBTL3Q96JM7 780 aaPredicted RBP8.51□□□□□ -1.05
PRKCH-228ENST00000640011 A0A087WZG4 1122 aa8.5□□□□□ -1.05
PRKCH-228ENST00000640011 NFKBIEO00221 500 aa8.5□□□□□ -1.05
PRKCH-228ENST00000640011 C2CD5Q86YS7 1000 aa8.5□□□□□ -1.05
PRKCH-228ENST00000640011 SLC52A2Q9HAB3 445 aa8.5□□□□□ -1.05
PRKCH-228ENST00000640011 LTBP3Q9NS15 1303 aa8.5□□□□□ -1.05
PRKCH-228ENST00000640011 COL15A1P39059 1388 aa8.49□□□□□ -1.05
PRKCH-228ENST00000640011 CNTNAP1P78357 1384 aa8.49□□□□□ -1.05
PRKCH-228ENST00000640011 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
PRKCH-228ENST00000640011 POTECB2RU33 542 aa8.49□□□□□ -1.05
PRKCH-228ENST00000640011 SLC34A2O95436 690 aa8.49□□□□□ -1.05
PRKCH-228ENST00000640011 CYP19A1P11511 503 aaPredicted RBP8.49□□□□□ -1.05
PRKCH-228ENST00000640011 TNNT2P45379 298 aaPredicted RBP8.49□□□□□ -1.05
PRKCH-228ENST00000640011 NPM2Q86SE8 214 aaKnown RBP8.49□□□□□ -1.05
PRKCH-228ENST00000640011 LDHDQ86WU2 507 aa8.49□□□□□ -1.05
PRKCH-228ENST00000640011 DNAJC10Q8IXB1 793 aa8.49□□□□□ -1.05
PRKCH-228ENST00000640011 BRIP1Q9BX63 1249 aa8.49□□□□□ -1.05
PRKCH-228ENST00000640011 TAOK3Q9H2K8 898 aa8.49□□□□□ -1.05
PRKCH-228ENST00000640011 MKRN1Q9UHC7 482 aaKnown RBP8.49□□□□□ -1.05
PRKCH-228ENST00000640011 TMEM88BA6NKF7 163 aa8.48□□□□□ -1.05
PRKCH-228ENST00000640011 G3V3G9 751 aa8.48□□□□□ -1.05
PRKCH-228ENST00000640011 STARD3NLO95772 234 aa8.48□□□□□ -1.05
PRKCH-228ENST00000640011 SULT6B1Q6IMI4 303 aa8.48□□□□□ -1.05
PRKCH-228ENST00000640011 PLPP6Q8IY26 295 aa8.48□□□□□ -1.05
PRKCH-228ENST00000640011 CNKSR1Q969H4 720 aa8.48□□□□□ -1.05
PRKCH-228ENST00000640011 ZNF622Q969S3 477 aaKnown RBP eCLIP8.48□□□□□ -1.05
PRKCH-228ENST00000640011 PCDH10Q9P2E7 1040 aa8.48□□□□□ -1.05
PRKCH-228ENST00000640011 SBF1O95248 1867 aa8.48□□□□□ -1.05
PRKCH-228ENST00000640011 NPHP1O15259 732 aa8.47□□□□□ -1.05
PRKCH-228ENST00000640011 FOXN1O15353 648 aa8.47□□□□□ -1.05
PRKCH-228ENST00000640011 MAP2K1Q02750 393 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-228ENST00000640011 TEX13AQ9BXU3 409 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-228ENST00000640011 TIMELESSQ9UNS1 1208 aa8.47□□□□□ -1.05
PRKCH-228ENST00000640011 ZBTB1Q9Y2K1 713 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms