RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 RALBP1Q15311 655 aa12.44□□□□□ -0.42
TRIO-225ENST00000639876 SETDB2Q96T68 719 aa12.44□□□□□ -0.42
TRIO-225ENST00000639876 BRIP1Q9BX63 1249 aa12.44□□□□□ -0.42
TRIO-225ENST00000639876 AFDNP55196 1824 aaKnown RBP12.44□□□□□ -0.42
TRIO-225ENST00000639876 BCORQ6W2J9 1755 aa12.43□□□□□ -0.42
TRIO-225ENST00000639876 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
TRIO-225ENST00000639876 LMNB1P20700 586 aa12.43□□□□□ -0.42
TRIO-225ENST00000639876 KCNA3P22001 575 aa12.43□□□□□ -0.42
TRIO-225ENST00000639876 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
TRIO-225ENST00000639876 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
TRIO-225ENST00000639876 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
TRIO-225ENST00000639876 APLP1P51693 650 aa12.42□□□□□ -0.42
TRIO-225ENST00000639876 FSTL1Q12841 308 aa12.42□□□□□ -0.42
TRIO-225ENST00000639876 C9orf131Q5VYM1 1079 aa12.42□□□□□ -0.42
TRIO-225ENST00000639876 DZIP3Q86Y13 1208 aaKnown RBP12.42□□□□□ -0.42
TRIO-225ENST00000639876 RBM46Q8TBY0 533 aaKnown RBP12.42□□□□□ -0.42
TRIO-225ENST00000639876 CNKSR1Q969H4 720 aa12.42□□□□□ -0.42
TRIO-225ENST00000639876 RNF181Q9P0P0 153 aa12.42□□□□□ -0.42
TRIO-225ENST00000639876 UTRNP46939 3433 aa12.42□□□□□ -0.42
TRIO-225ENST00000639876 ERBB4Q15303 1308 aa12.41□□□□□ -0.42
TRIO-225ENST00000639876 CNGB1Q14028 1251 aaPredicted RBP12.41□□□□□ -0.42
TRIO-225ENST00000639876 C2CD5Q86YS7 1000 aa12.41□□□□□ -0.42
TRIO-225ENST00000639876 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
TRIO-225ENST00000639876 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
TRIO-225ENST00000639876 ZNF330Q9Y3S2 320 aaPredicted RBP12.41□□□□□ -0.42
TRIO-225ENST00000639876 LTBP3Q9NS15 1303 aa12.4□□□□□ -0.42
TRIO-225ENST00000639876 KIF3CO14782 793 aa12.4□□□□□ -0.42
TRIO-225ENST00000639876 STYK1Q6J9G0 422 aa12.4□□□□□ -0.42
TRIO-225ENST00000639876 DPY19L2Q6NUT2 758 aa12.4□□□□□ -0.42
TRIO-225ENST00000639876 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
TRIO-225ENST00000639876 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
TRIO-225ENST00000639876 WWC3Q9ULE0 1092 aa12.4□□□□□ -0.42
TRIO-225ENST00000639876 CAMTA2O94983 1202 aa12.39□□□□□ -0.43
TRIO-225ENST00000639876 CHRNA5P30532 468 aa12.39□□□□□ -0.43
TRIO-225ENST00000639876 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
TRIO-225ENST00000639876 TPTE2Q6XPS3 522 aa12.39□□□□□ -0.43
TRIO-225ENST00000639876 NYXQ9GZU5 481 aa12.39□□□□□ -0.43
TRIO-225ENST00000639876 IBTKQ9P2D0 1353 aaPredicted RBP12.39□□□□□ -0.43
TRIO-225ENST00000639876 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
TRIO-225ENST00000639876 NFE2L2Q16236 605 aa12.38□□□□□ -0.43
TRIO-225ENST00000639876 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
TRIO-225ENST00000639876 PRR5LQ6MZQ0 368 aa12.38□□□□□ -0.43
TRIO-225ENST00000639876 BICDL1Q6ZP65 573 aa12.38□□□□□ -0.43
TRIO-225ENST00000639876 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
TRIO-225ENST00000639876 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
TRIO-225ENST00000639876 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
TRIO-225ENST00000639876 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
TRIO-225ENST00000639876 GABBR2O75899 941 aa12.37□□□□□ -0.43
TRIO-225ENST00000639876 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
TRIO-225ENST00000639876 MCM10Q7L590 875 aa12.37□□□□□ -0.43
TRIO-225ENST00000639876 SMC1BQ8NDV3 1235 aa12.37□□□□□ -0.43
TRIO-225ENST00000639876 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
TRIO-225ENST00000639876 KDM3BQ7LBC6 1761 aa12.37□□□□□ -0.43
TRIO-225ENST00000639876 SBF1O95248 1867 aa12.37□□□□□ -0.43
TRIO-225ENST00000639876 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
TRIO-225ENST00000639876 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
TRIO-225ENST00000639876 A1BGP04217 495 aa12.36□□□□□ -0.43
TRIO-225ENST00000639876 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
TRIO-225ENST00000639876 ZNF622Q969S3 477 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRIO-225ENST00000639876 TAOK3Q9H2K8 898 aa12.36□□□□□ -0.43
TRIO-225ENST00000639876 TIAM2Q8IVF5 1701 aa12.36□□□□□ -0.43
TRIO-225ENST00000639876 RNF123Q5XPI4 1314 aa12.36□□□□□ -0.43
TRIO-225ENST00000639876 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
TRIO-225ENST00000639876 VEGFAP15692 232 aaPredicted RBP12.35□□□□□ -0.43
TRIO-225ENST00000639876 NPR1P16066 1061 aa12.35□□□□□ -0.43
TRIO-225ENST00000639876 CD44P16070 742 aaKnown RBP12.35□□□□□ -0.43
TRIO-225ENST00000639876 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
TRIO-225ENST00000639876 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
TRIO-225ENST00000639876 CHMP4AQ9BY43 222 aa12.35□□□□□ -0.43
TRIO-225ENST00000639876 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
TRIO-225ENST00000639876 DLG5Q8TDM6 1919 aa12.35□□□□□ -0.43
TRIO-225ENST00000639876 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
TRIO-225ENST00000639876 SRGNP10124 158 aa12.34□□□□□ -0.43
TRIO-225ENST00000639876 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
TRIO-225ENST00000639876 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
TRIO-225ENST00000639876 NIP7Q9Y221 180 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRIO-225ENST00000639876 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
TRIO-225ENST00000639876 IQCA1LA6NCM1 817 aa12.33□□□□□ -0.44
TRIO-225ENST00000639876 WDR43Q15061 677 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRIO-225ENST00000639876 PARP10Q53GL7 1025 aa12.33□□□□□ -0.44
TRIO-225ENST00000639876 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.44
TRIO-225ENST00000639876 TMX4Q9H1E5 349 aaPredicted RBP12.33□□□□□ -0.44
TRIO-225ENST00000639876 FER1L6Q2WGJ9 1857 aa12.33□□□□□ -0.44
TRIO-225ENST00000639876 COL11A2P13942 1736 aaPredicted RBP12.32□□□□□ -0.44
TRIO-225ENST00000639876 WDR90Q96KV7 1748 aa12.32□□□□□ -0.44
TRIO-225ENST00000639876 KLRG2A4D1S0 409 aaPredicted RBP12.32□□□□□ -0.44
TRIO-225ENST00000639876 ERFEQ4G0M1 354 aa12.32□□□□□ -0.44
TRIO-225ENST00000639876 HSP90AB3PQ58FF7 597 aa12.32□□□□□ -0.44
TRIO-225ENST00000639876 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
TRIO-225ENST00000639876 NMRK2Q9NPI5 230 aa12.32□□□□□ -0.44
TRIO-225ENST00000639876 GOLGB1Q14789 3259 aaKnown RBP12.32□□□□□ -0.44
TRIO-225ENST00000639876 MAP3K15Q6ZN16 1313 aa12.32□□□□□ -0.44
TRIO-225ENST00000639876 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
TRIO-225ENST00000639876 CALD1Q05682 793 aaKnown RBP12.31□□□□□ -0.44
TRIO-225ENST00000639876 PPP1R42Q7Z4L9 355 aa12.31□□□□□ -0.44
TRIO-225ENST00000639876 TSPYL4Q9UJ04 414 aa12.31□□□□□ -0.44
TRIO-225ENST00000639876 NFKBIEO00221 500 aa12.3□□□□□ -0.44
TRIO-225ENST00000639876 KCNQ3O43525 872 aa12.3□□□□□ -0.44
TRIO-225ENST00000639876 C21orf2O43822 256 aa12.3□□□□□ -0.44
TRIO-225ENST00000639876 HOXB7P09629 217 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms