RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
NECAP1-218ENST00000639595 METTL22Q9BUU2 404 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-218ENST00000639595 SCN11AQ9UI33 1791 aa10.48□□□□□ -0.73
NECAP1-218ENST00000639595 SOS2Q07890 1332 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-218ENST00000639595 SGSM2O43147 1006 aa10.48□□□□□ -0.73
NECAP1-218ENST00000639595 L1TD1Q5T7N2 865 aaKnown RBP10.48□□□□□ -0.73
NECAP1-218ENST00000639595 RIC3Q7Z5B4 369 aa10.48□□□□□ -0.73
NECAP1-218ENST00000639595 CNTROBQ8N137 903 aa10.48□□□□□ -0.73
NECAP1-218ENST00000639595 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
NECAP1-218ENST00000639595 ANO2Q9NQ90 1003 aa10.48□□□□□ -0.73
NECAP1-218ENST00000639595 NEURL1BA8MQ27 555 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 SSFA2P28290 1259 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 HSPA4P34932 840 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 NEK4P51957 841 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 AIMP1Q12904 312 aaKnown RBP10.47□□□□□ -0.73
NECAP1-218ENST00000639595 COPS6Q7L5N1 327 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 XAGE3Q8WTP9 111 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 USP16Q9Y5T5 823 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 NEXNQ0ZGT2 675 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 CUL4AQ13619 759 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 GCKRQ14397 625 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 ANKRD13DQ6ZTN6 518 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 IL25Q9H293 177 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 BICC1Q9H694 974 aaKnown RBP10.47□□□□□ -0.73
NECAP1-218ENST00000639595 ECHDC1Q9NTX5 307 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 PALD1Q9ULE6 856 aa10.47□□□□□ -0.73
NECAP1-218ENST00000639595 COL15A1P39059 1388 aa10.46□□□□□ -0.73
NECAP1-218ENST00000639595 OS9Q13438 667 aaPredicted RBP10.46□□□□□ -0.73
NECAP1-218ENST00000639595 TTC5Q8N0Z6 440 aa10.46□□□□□ -0.73
NECAP1-218ENST00000639595 ISY1Q9ULR0 285 aaKnown RBP10.46□□□□□ -0.73
NECAP1-218ENST00000639595 WDR17Q8IZU2 1322 aa10.46□□□□□ -0.74
NECAP1-218ENST00000639595 BAG4O95429 457 aaKnown RBP10.46□□□□□ -0.74
NECAP1-218ENST00000639595 CABP4P57796 275 aa10.46□□□□□ -0.74
NECAP1-218ENST00000639595 TMX3Q96JJ7 454 aa10.46□□□□□ -0.74
NECAP1-218ENST00000639595 SLAIN2Q9P270 581 aa10.46□□□□□ -0.74
NECAP1-218ENST00000639595 PA2G4Q9UQ80 394 aaKnown RBP10.46□□□□□ -0.74
NECAP1-218ENST00000639595 PKD1L3Q7Z443 1732 aa10.46□□□□□ -0.74
NECAP1-218ENST00000639595 RAD50Q92878 1312 aa10.45□□□□□ -0.74
NECAP1-218ENST00000639595 SASH1O94885 1247 aa10.45□□□□□ -0.74
NECAP1-218ENST00000639595 MYL6BP14649 208 aa10.45□□□□□ -0.74
NECAP1-218ENST00000639595 NKX1-1Q15270 411 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-218ENST00000639595 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
NECAP1-218ENST00000639595 GPATCH3Q96I76 525 aa10.45□□□□□ -0.74
NECAP1-218ENST00000639595 LSG1Q9H089 658 aaKnown RBP10.45□□□□□ -0.74
NECAP1-218ENST00000639595 ERBB4Q15303 1308 aa10.45□□□□□ -0.74
NECAP1-218ENST00000639595 GOLGA6L3A6NEY3 463 aa10.45□□□□□ -0.74
NECAP1-218ENST00000639595 G3BP1Q13283 466 aaKnown RBP eCLIP10.45□□□□□ -0.74
NECAP1-218ENST00000639595 ZGPATQ8N5A5 531 aaKnown RBP10.45□□□□□ -0.74
NECAP1-218ENST00000639595 ERVV-2B6SEH9 535 aa10.44□□□□□ -0.74
NECAP1-218ENST00000639595 GOLGA6L22H0YM25 854 aa10.44□□□□□ -0.74
NECAP1-218ENST00000639595 IFIT2P09913 472 aaKnown RBP10.44□□□□□ -0.74
NECAP1-218ENST00000639595 ZCRB1Q8TBF4 217 aaKnown RBP10.44□□□□□ -0.74
NECAP1-218ENST00000639595 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
NECAP1-218ENST00000639595 MAP4K4O95819 1239 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-218ENST00000639595 GZF1Q9H116 711 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-218ENST00000639595 PRDM11Q9NQV5 511 aa10.44□□□□□ -0.74
NECAP1-218ENST00000639595 ZDHHC9Q9Y397 364 aa10.44□□□□□ -0.74
NECAP1-218ENST00000639595 PCDH11XQ9BZA7 1347 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 PCDH11YQ9BZA8 1340 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 RABL6Q3YEC7 729 aaPredicted RBP10.43□□□□□ -0.74
NECAP1-218ENST00000639595 EAF2Q96CJ1 260 aaPredicted RBP10.43□□□□□ -0.74
NECAP1-218ENST00000639595 EVI5LQ96CN4 794 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 MYD88Q99836 296 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 CARD10Q9BWT7 1032 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 COPRSQ9NQ92 184 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 C5P01031 1676 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 EPHA10Q5JZY3 1008 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 AACSQ86V21 672 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 PLBD2Q8NHP8 589 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 RUFY2Q8WXA3 655 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 KCNB2Q92953 911 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 SNRKQ9NRH2 765 aa10.43□□□□□ -0.74
NECAP1-218ENST00000639595 XRCC6P12956 609 aaKnown RBP eCLIP10.42□□□□□ -0.74
NECAP1-218ENST00000639595 PKP1Q13835 747 aa10.42□□□□□ -0.74
NECAP1-218ENST00000639595 KLHL40Q2TBA0 621 aa10.42□□□□□ -0.74
NECAP1-218ENST00000639595 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-218ENST00000639595 XIRP1Q702N8 1843 aaKnown RBP10.42□□□□□ -0.74
NECAP1-218ENST00000639595 RFX5P48382 616 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-218ENST00000639595 CASP7P55210 303 aa10.42□□□□□ -0.74
NECAP1-218ENST00000639595 KIAA1211Q6ZU35 1233 aa10.42□□□□□ -0.74
NECAP1-218ENST00000639595 TOM1L2Q6ZVM7 507 aa10.42□□□□□ -0.74
NECAP1-218ENST00000639595 COL5A2P05997 1499 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-218ENST00000639595 PARP4Q9UKK3 1724 aaKnown RBP10.42□□□□□ -0.74
NECAP1-218ENST00000639595 MRE11P49959 708 aa10.41□□□□□ -0.74
NECAP1-218ENST00000639595 CWC27Q6UX04 472 aaKnown RBP10.41□□□□□ -0.74
NECAP1-218ENST00000639595 TTC14Q96N46 770 aa10.41□□□□□ -0.74
NECAP1-218ENST00000639595 DIAPH3Q9NSV4 1193 aa10.41□□□□□ -0.74
NECAP1-218ENST00000639595 SNX14Q9Y5W7 946 aa10.41□□□□□ -0.74
NECAP1-218ENST00000639595 GLI3P10071 1580 aa10.41□□□□□ -0.74
NECAP1-218ENST00000639595 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
NECAP1-218ENST00000639595 HIP1O00291 1037 aa10.41□□□□□ -0.74
NECAP1-218ENST00000639595 NBPF14Q5TI25 921 aa10.41□□□□□ -0.74
NECAP1-218ENST00000639595 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
NECAP1-218ENST00000639595 NBPF15Q8N660 670 aa10.41□□□□□ -0.74
NECAP1-218ENST00000639595 IL2RBP14784 551 aa10.4□□□□□ -0.74
NECAP1-218ENST00000639595 PTPN12Q05209 780 aaKnown RBP10.4□□□□□ -0.74
NECAP1-218ENST00000639595 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
NECAP1-218ENST00000639595 UPF3BQ9BZI7 483 aaKnown RBP10.4□□□□□ -0.74
NECAP1-218ENST00000639595 LMBRD1Q9NUN5 540 aa10.4□□□□□ -0.74
NECAP1-218ENST00000639595 H7C1W4 665 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms