RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
ATRIP-208ENST00000639561 ANKRD45Q5TZF3 282 aa17.32■□□□□ 0.36
ATRIP-208ENST00000639561 F6X3S4 739 aa17.31■□□□□ 0.36
ATRIP-208ENST00000639561 MEIS3Q99687 375 aa17.31■□□□□ 0.36
ATRIP-208ENST00000639561 ITPK1Q13572 414 aa17.31■□□□□ 0.36
ATRIP-208ENST00000639561 CICQ96RK0 1608 aaPredicted RBP17.31■□□□□ 0.36
ATRIP-208ENST00000639561 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
ATRIP-208ENST00000639561 RBM42Q9BTD8 480 aaKnown RBP17.3■□□□□ 0.36
ATRIP-208ENST00000639561 STK31Q9BXU1 1019 aa17.3■□□□□ 0.36
ATRIP-208ENST00000639561 MRC1P22897 1456 aa17.3■□□□□ 0.36
ATRIP-208ENST00000639561 ADAMTS7Q9UKP4 1686 aa17.3■□□□□ 0.36
ATRIP-208ENST00000639561 CCDC30Q5VVM6 783 aa17.3■□□□□ 0.36
ATRIP-208ENST00000639561 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
ATRIP-208ENST00000639561 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
ATRIP-208ENST00000639561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
ATRIP-208ENST00000639561 GNPATO15228 680 aa17.29■□□□□ 0.36
ATRIP-208ENST00000639561 NBR1Q14596 966 aa17.29■□□□□ 0.36
ATRIP-208ENST00000639561 KDM3BQ7LBC6 1761 aa17.29■□□□□ 0.36
ATRIP-208ENST00000639561 PHF14O94880 888 aa17.29■□□□□ 0.36
ATRIP-208ENST00000639561 FLIIQ13045 1269 aa17.29■□□□□ 0.36
ATRIP-208ENST00000639561 CEP85Q6P2H3 762 aa17.29■□□□□ 0.36
ATRIP-208ENST00000639561 SLC4A10Q6U841 1118 aa17.29■□□□□ 0.36
ATRIP-208ENST00000639561 TBC1D32Q96NH3 1257 aa17.29■□□□□ 0.36
ATRIP-208ENST00000639561 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
ATRIP-208ENST00000639561 MSL1Q68DK7 614 aa17.28■□□□□ 0.36
ATRIP-208ENST00000639561 ANKRD44Q8N8A2 993 aa17.28■□□□□ 0.36
ATRIP-208ENST00000639561 YY1P25490 414 aa17.28■□□□□ 0.36
ATRIP-208ENST00000639561 NFATC2IPQ8NCF5 419 aa17.28■□□□□ 0.36
ATRIP-208ENST00000639561 DCTPP1Q9H773 170 aa17.28■□□□□ 0.36
ATRIP-208ENST00000639561 CNTNAP4Q9C0A0 1308 aa17.27■□□□□ 0.36
ATRIP-208ENST00000639561 RC3H1Q5TC82 1133 aaKnown RBP17.27■□□□□ 0.36
ATRIP-208ENST00000639561 CHD4Q14839 1912 aa17.27■□□□□ 0.36
ATRIP-208ENST00000639561 SLC52A2Q9HAB3 445 aa17.26■□□□□ 0.35
ATRIP-208ENST00000639561 TJP1Q07157 1748 aa17.26■□□□□ 0.35
ATRIP-208ENST00000639561 CCT4P50991 539 aaKnown RBP17.26■□□□□ 0.35
ATRIP-208ENST00000639561 FKBP5Q13451 457 aaPredicted RBP17.26■□□□□ 0.35
ATRIP-208ENST00000639561 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
ATRIP-208ENST00000639561 RTCBQ9Y3I0 505 aaKnown RBP17.26■□□□□ 0.35
ATRIP-208ENST00000639561 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
ATRIP-208ENST00000639561 KCNQ3O43525 872 aa17.25■□□□□ 0.35
ATRIP-208ENST00000639561 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
ATRIP-208ENST00000639561 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
ATRIP-208ENST00000639561 RPAP2Q8IXW5 612 aaPredicted RBP17.25■□□□□ 0.35
ATRIP-208ENST00000639561 SLC4A9Q96Q91 983 aa17.25■□□□□ 0.35
ATRIP-208ENST00000639561 ADRA2BP18089 450 aa17.25■□□□□ 0.35
ATRIP-208ENST00000639561 HDGFL1Q5TGJ6 251 aa17.25■□□□□ 0.35
ATRIP-208ENST00000639561 BMP2KLQ5H9B9 411 aa17.24■□□□□ 0.35
ATRIP-208ENST00000639561 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
ATRIP-208ENST00000639561 N4BP2Q86UW6 1770 aaPredicted RBP17.23■□□□□ 0.35
ATRIP-208ENST00000639561 TEFQ10587 303 aa17.23■□□□□ 0.35
ATRIP-208ENST00000639561 TRAPPC3LQ5T215 181 aa17.23■□□□□ 0.35
ATRIP-208ENST00000639561 DAXXQ9UER7 740 aaPredicted RBP17.23■□□□□ 0.35
ATRIP-208ENST00000639561 CD2APQ9Y5K6 639 aa17.23■□□□□ 0.35
ATRIP-208ENST00000639561 MYH14Q7Z406 1995 aaKnown RBP17.23■□□□□ 0.35
ATRIP-208ENST00000639561 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
ATRIP-208ENST00000639561 GPR162Q16538 588 aa17.23■□□□□ 0.35
ATRIP-208ENST00000639561 C4AP0C0L4 1744 aa17.22■□□□□ 0.35
ATRIP-208ENST00000639561 BTBD11A6QL63 1104 aa17.22■□□□□ 0.35
ATRIP-208ENST00000639561 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
ATRIP-208ENST00000639561 PHAXQ9H814 394 aaKnown RBP17.22■□□□□ 0.35
ATRIP-208ENST00000639561 UBR2Q8IWV8 1755 aa17.21■□□□□ 0.35
ATRIP-208ENST00000639561 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
ATRIP-208ENST00000639561 NLGN2Q8NFZ4 835 aa17.21■□□□□ 0.35
ATRIP-208ENST00000639561 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.34
ATRIP-208ENST00000639561 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
ATRIP-208ENST00000639561 PXDNLA1KZ92 1463 aa17.2■□□□□ 0.34
ATRIP-208ENST00000639561 HOXB7P09629 217 aa17.2■□□□□ 0.34
ATRIP-208ENST00000639561 PLEKHM2Q8IWE5 1019 aa17.2■□□□□ 0.34
ATRIP-208ENST00000639561 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
ATRIP-208ENST00000639561 CRKLP46109 303 aaKnown RBP17.19■□□□□ 0.34
ATRIP-208ENST00000639561 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
ATRIP-208ENST00000639561 C22orf23Q9BZE7 217 aa17.19■□□□□ 0.34
ATRIP-208ENST00000639561 CHPF2Q9P2E5 772 aa17.19■□□□□ 0.34
ATRIP-208ENST00000639561 GNAI2P04899 355 aa17.18■□□□□ 0.34
ATRIP-208ENST00000639561 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
ATRIP-208ENST00000639561 RFC4P35249 363 aa17.18■□□□□ 0.34
ATRIP-208ENST00000639561 NLGN1Q8N2Q7 840 aa17.18■□□□□ 0.34
ATRIP-208ENST00000639561 GSPT1P15170 499 aaKnown RBP17.18■□□□□ 0.34
ATRIP-208ENST00000639561 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
ATRIP-208ENST00000639561 ARHGEF1Q92888 912 aaKnown RBP17.18■□□□□ 0.34
ATRIP-208ENST00000639561 SMARCA5O60264 1052 aaPredicted RBP17.17■□□□□ 0.34
ATRIP-208ENST00000639561 APBB1O00213 710 aa17.17■□□□□ 0.34
ATRIP-208ENST00000639561 TTC5Q8N0Z6 440 aa17.17■□□□□ 0.34
ATRIP-208ENST00000639561 VSIG10Q8N0Z9 540 aa17.17■□□□□ 0.34
ATRIP-208ENST00000639561 KIF13BQ9NQT8 1826 aa17.17■□□□□ 0.34
ATRIP-208ENST00000639561 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
ATRIP-208ENST00000639561 GRIN3BO60391 1043 aa17.16■□□□□ 0.34
ATRIP-208ENST00000639561 HMMRO75330 724 aa17.16■□□□□ 0.34
ATRIP-208ENST00000639561 ANXA1P04083 346 aa17.16■□□□□ 0.34
ATRIP-208ENST00000639561 GNAI3P08754 354 aa17.16■□□□□ 0.34
ATRIP-208ENST00000639561 MMP10P09238 476 aa17.16■□□□□ 0.34
ATRIP-208ENST00000639561 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
ATRIP-208ENST00000639561 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
ATRIP-208ENST00000639561 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
ATRIP-208ENST00000639561 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
ATRIP-208ENST00000639561 CCDC87Q9NVE4 849 aa17.15■□□□□ 0.34
ATRIP-208ENST00000639561 GIGYF1O75420 1035 aaPredicted RBP17.15■□□□□ 0.34
ATRIP-208ENST00000639561 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
ATRIP-208ENST00000639561 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
ATRIP-208ENST00000639561 BECN1Q14457 450 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms