RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
GFAP-227ENST00000638400 C2CD5Q86YS7 1000 aa16.35■□□□□ 0.21
GFAP-227ENST00000638400 NGEFQ8N5V2 710 aa16.35■□□□□ 0.21
GFAP-227ENST00000638400 BRIP1Q9BX63 1249 aa16.35■□□□□ 0.21
GFAP-227ENST00000638400 ADCY9O60503 1353 aa16.35■□□□□ 0.21
GFAP-227ENST00000638400 H0YIN7 160 aa16.34■□□□□ 0.21
GFAP-227ENST00000638400 PDE6BP35913 854 aa16.34■□□□□ 0.21
GFAP-227ENST00000638400 ST5P78524 1137 aa16.34■□□□□ 0.21
GFAP-227ENST00000638400 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
GFAP-227ENST00000638400 ARHGAP27Q6ZUM4 889 aa16.34■□□□□ 0.21
GFAP-227ENST00000638400 NBPF5PQ86XG9 351 aaPredicted RBP16.34■□□□□ 0.21
GFAP-227ENST00000638400 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
GFAP-227ENST00000638400 MRS2Q9HD23 443 aa16.34■□□□□ 0.21
GFAP-227ENST00000638400 PDZRN3Q9UPQ7 1066 aa16.34■□□□□ 0.21
GFAP-227ENST00000638400 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
GFAP-227ENST00000638400 ERVV-1B6SEH8 477 aa16.33■□□□□ 0.2
GFAP-227ENST00000638400 EIF2S2P20042 333 aaKnown RBP16.33■□□□□ 0.2
GFAP-227ENST00000638400 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
GFAP-227ENST00000638400 ATP10DQ9P241 1426 aa16.33■□□□□ 0.2
GFAP-227ENST00000638400 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
GFAP-227ENST00000638400 HLFQ16534 295 aa16.32■□□□□ 0.2
GFAP-227ENST00000638400 TTLL7Q6ZT98 887 aa16.32■□□□□ 0.2
GFAP-227ENST00000638400 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
GFAP-227ENST00000638400 HOXB7P09629 217 aa16.31■□□□□ 0.2
GFAP-227ENST00000638400 PDIA6Q15084 440 aa16.31■□□□□ 0.2
GFAP-227ENST00000638400 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
GFAP-227ENST00000638400 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
GFAP-227ENST00000638400 BRCA1P38398 1863 aaKnown RBP16.31■□□□□ 0.2
GFAP-227ENST00000638400 GNAI1P63096 354 aa16.3■□□□□ 0.2
GFAP-227ENST00000638400 KRT24Q2M2I5 525 aa16.3■□□□□ 0.2
GFAP-227ENST00000638400 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
GFAP-227ENST00000638400 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
GFAP-227ENST00000638400 ZBTB3Q9H5J0 574 aa16.3■□□□□ 0.2
GFAP-227ENST00000638400 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
GFAP-227ENST00000638400 ZNF853P0CG23 659 aa16.29■□□□□ 0.2
GFAP-227ENST00000638400 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
GFAP-227ENST00000638400 HDGFL1Q5TGJ6 251 aa16.29■□□□□ 0.2
GFAP-227ENST00000638400 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
GFAP-227ENST00000638400 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
GFAP-227ENST00000638400 IBTKQ9P2D0 1353 aaPredicted RBP16.28■□□□□ 0.2
GFAP-227ENST00000638400 ANXA1P04083 346 aa16.28■□□□□ 0.2
GFAP-227ENST00000638400 ZNF622Q969S3 477 aaKnown RBP eCLIP16.28■□□□□ 0.2
GFAP-227ENST00000638400 NYXQ9GZU5 481 aa16.28■□□□□ 0.2
GFAP-227ENST00000638400 DDX21Q9NR30 783 aaKnown RBP eCLIP16.28■□□□□ 0.2
GFAP-227ENST00000638400 FAM177BA6PVY3 158 aa16.27■□□□□ 0.2
GFAP-227ENST00000638400 SRGNP10124 158 aa16.27■□□□□ 0.2
GFAP-227ENST00000638400 STYK1Q6J9G0 422 aa16.27■□□□□ 0.2
GFAP-227ENST00000638400 GIGYF2Q6Y7W6 1299 aaKnown RBP16.27■□□□□ 0.2
GFAP-227ENST00000638400 DLEC1Q9Y238 1755 aa16.27■□□□□ 0.2
GFAP-227ENST00000638400 GPTP24298 496 aa16.26■□□□□ 0.19
GFAP-227ENST00000638400 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
GFAP-227ENST00000638400 CCDC27Q2M243 656 aa16.26■□□□□ 0.19
GFAP-227ENST00000638400 C9orf131Q5VYM1 1079 aa16.26■□□□□ 0.19
GFAP-227ENST00000638400 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
GFAP-227ENST00000638400 XAGE3Q8WTP9 111 aa16.26■□□□□ 0.19
GFAP-227ENST00000638400 CNKSR1Q969H4 720 aa16.26■□□□□ 0.19
GFAP-227ENST00000638400 GPBP1L1Q9HC44 474 aaPredicted RBP16.26■□□□□ 0.19
GFAP-227ENST00000638400 CHPF2Q9P2E5 772 aa16.26■□□□□ 0.19
GFAP-227ENST00000638400 ARFGEF1Q9Y6D6 1849 aa16.26■□□□□ 0.19
GFAP-227ENST00000638400 UBN2Q6ZU65 1347 aa16.25■□□□□ 0.19
GFAP-227ENST00000638400 ANKRD31Q8N7Z5 1873 aa16.25■□□□□ 0.19
GFAP-227ENST00000638400 KLRG2A4D1S0 409 aaPredicted RBP16.25■□□□□ 0.19
GFAP-227ENST00000638400 COPS6Q7L5N1 327 aa16.25■□□□□ 0.19
GFAP-227ENST00000638400 ZNF34Q8IZ26 560 aa16.25■□□□□ 0.19
GFAP-227ENST00000638400 ZNF526Q8TF50 670 aaPredicted RBP16.25■□□□□ 0.19
GFAP-227ENST00000638400 MASTLQ96GX5 879 aa16.25■□□□□ 0.19
GFAP-227ENST00000638400 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
GFAP-227ENST00000638400 NPR1P16066 1061 aa16.24■□□□□ 0.19
GFAP-227ENST00000638400 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
GFAP-227ENST00000638400 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
GFAP-227ENST00000638400 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
GFAP-227ENST00000638400 RNF181Q9P0P0 153 aa16.24■□□□□ 0.19
GFAP-227ENST00000638400 DBF4Q9UBU7 674 aaPredicted RBP16.24■□□□□ 0.19
GFAP-227ENST00000638400 ABCC12Q96J65 1359 aa16.24■□□□□ 0.19
GFAP-227ENST00000638400 RIC1Q4ADV7 1423 aa16.23■□□□□ 0.19
GFAP-227ENST00000638400 RASSF7Q02833 373 aa16.23■□□□□ 0.19
GFAP-227ENST00000638400 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
GFAP-227ENST00000638400 PRPF40BQ6NWY9 871 aaKnown RBP16.23■□□□□ 0.19
GFAP-227ENST00000638400 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
GFAP-227ENST00000638400 C21orf2O43822 256 aa16.22■□□□□ 0.19
GFAP-227ENST00000638400 NTSR2O95665 410 aa16.22■□□□□ 0.19
GFAP-227ENST00000638400 ERFEQ4G0M1 354 aa16.22■□□□□ 0.19
GFAP-227ENST00000638400 SOGA3Q5TF21 947 aa16.22■□□□□ 0.19
GFAP-227ENST00000638400 SUSD4Q5VX71 490 aa16.22■□□□□ 0.19
GFAP-227ENST00000638400 PPP1R42Q7Z4L9 355 aa16.22■□□□□ 0.19
GFAP-227ENST00000638400 NUTM1Q86Y26 1132 aa16.22■□□□□ 0.19
GFAP-227ENST00000638400 HYPKQ9NX55 129 aa16.22■□□□□ 0.19
GFAP-227ENST00000638400 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
GFAP-227ENST00000638400 NFKBIEO00221 500 aa16.21■□□□□ 0.19
GFAP-227ENST00000638400 LMNB1P20700 586 aa16.21■□□□□ 0.19
GFAP-227ENST00000638400 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
GFAP-227ENST00000638400 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
GFAP-227ENST00000638400 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
GFAP-227ENST00000638400 IL16Q14005 1332 aa16.2■□□□□ 0.18
GFAP-227ENST00000638400 RNF123Q5XPI4 1314 aa16.2■□□□□ 0.18
GFAP-227ENST00000638400 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
GFAP-227ENST00000638400 CRY2Q49AN0 593 aa16.2■□□□□ 0.18
GFAP-227ENST00000638400 C8orf58Q8NAV2 365 aa16.2■□□□□ 0.18
GFAP-227ENST00000638400 PLBD2Q8NHP8 589 aa16.2■□□□□ 0.18
GFAP-227ENST00000638400 UTP14AQ9BVJ6 771 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms