RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 GYS1P13807 737 aa24.87■■□□□ 1.57
HLA-A-209ENST00000638375 KIF6Q6ZMV9 814 aa24.87■■□□□ 1.57
HLA-A-209ENST00000638375 SMC4Q9NTJ3 1288 aa24.87■■□□□ 1.57
HLA-A-209ENST00000638375 BCORQ6W2J9 1755 aa24.87■■□□□ 1.57
HLA-A-209ENST00000638375 FLIIQ13045 1269 aa24.86■■□□□ 1.57
HLA-A-209ENST00000638375 SLC16A10Q8TF71 515 aa24.86■■□□□ 1.57
HLA-A-209ENST00000638375 ZBTB3Q9H5J0 574 aa24.86■■□□□ 1.57
HLA-A-209ENST00000638375 HLFQ16534 295 aa24.85■■□□□ 1.57
HLA-A-209ENST00000638375 ERVV-1B6SEH8 477 aa24.84■■□□□ 1.57
HLA-A-209ENST00000638375 ZBTB7AO95365 584 aa24.84■■□□□ 1.57
HLA-A-209ENST00000638375 FKBP8Q14318 412 aa24.84■■□□□ 1.57
HLA-A-209ENST00000638375 MSL1Q68DK7 614 aa24.84■■□□□ 1.57
HLA-A-209ENST00000638375 CACNA1FO60840 1977 aa24.84■■□□□ 1.57
HLA-A-209ENST00000638375 BRPF1P55201 1214 aaPredicted RBP24.83■■□□□ 1.57
HLA-A-209ENST00000638375 ANKRD13DQ6ZTN6 518 aa24.83■■□□□ 1.57
HLA-A-209ENST00000638375 PLBD2Q8NHP8 589 aa24.83■■□□□ 1.57
HLA-A-209ENST00000638375 BCAR3O75815 825 aa24.82■■□□□ 1.56
HLA-A-209ENST00000638375 MTFR1LQ9H019 292 aa24.82■■□□□ 1.56
HLA-A-209ENST00000638375 ADCY9O60503 1353 aa24.81■■□□□ 1.56
HLA-A-209ENST00000638375 RGL2O15211 777 aa24.81■■□□□ 1.56
HLA-A-209ENST00000638375 DDX58O95786 925 aaKnown RBP24.8■■□□□ 1.56
HLA-A-209ENST00000638375 FKBP5Q13451 457 aaPredicted RBP24.8■■□□□ 1.56
HLA-A-209ENST00000638375 CLEC4GQ6UXB4 293 aa24.8■■□□□ 1.56
HLA-A-209ENST00000638375 GIGYF2Q6Y7W6 1299 aaKnown RBP24.8■■□□□ 1.56
HLA-A-209ENST00000638375 PI4KAP2A4QPH2 592 aa24.79■■□□□ 1.56
HLA-A-209ENST00000638375 TBC1D9BQ66K14 1250 aa24.79■■□□□ 1.56
HLA-A-209ENST00000638375 KSR2Q6VAB6 950 aa24.79■■□□□ 1.56
HLA-A-209ENST00000638375 RIC3Q7Z5B4 369 aa24.79■■□□□ 1.56
HLA-A-209ENST00000638375 NLGN1Q8N2Q7 840 aa24.79■■□□□ 1.56
HLA-A-209ENST00000638375 PI4KAP1Q8N8J0 262 aa24.79■■□□□ 1.56
HLA-A-209ENST00000638375 RCAN3Q9UKA8 241 aa24.79■■□□□ 1.56
HLA-A-209ENST00000638375 ATF5Q9Y2D1 282 aaPredicted RBP24.79■■□□□ 1.56
HLA-A-209ENST00000638375 ZNF652Q9Y2D9 606 aa24.79■■□□□ 1.56
HLA-A-209ENST00000638375 MAP3K2Q9Y2U5 619 aa24.78■■□□□ 1.56
HLA-A-209ENST00000638375 ARFGEF2Q9Y6D5 1785 aa24.77■■□□□ 1.56
HLA-A-209ENST00000638375 NFIXQ14938 502 aa24.77■■□□□ 1.56
HLA-A-209ENST00000638375 NOB1Q9ULX3 412 aaKnown RBP24.77■■□□□ 1.56
HLA-A-209ENST00000638375 PTPRCP08575 1304 aa24.77■■□□□ 1.56
HLA-A-209ENST00000638375 COL24A1Q17RW2 1714 aa24.77■■□□□ 1.56
HLA-A-209ENST00000638375 NUP98P52948 1817 aa24.77■■□□□ 1.56
HLA-A-209ENST00000638375 ATP10DQ9P241 1426 aa24.77■■□□□ 1.56
HLA-A-209ENST00000638375 TM4SF1P30408 202 aa24.76■■□□□ 1.55
HLA-A-209ENST00000638375 BICDL1Q6ZP65 573 aa24.76■■□□□ 1.55
HLA-A-209ENST00000638375 KIF16BQ96L93 1317 aa24.76■■□□□ 1.55
HLA-A-209ENST00000638375 F6X3S4 739 aa24.75■■□□□ 1.55
HLA-A-209ENST00000638375 DDR1Q08345 913 aa24.75■■□□□ 1.55
HLA-A-209ENST00000638375 TCIRG1Q13488 830 aa24.75■■□□□ 1.55
HLA-A-209ENST00000638375 MMP10P09238 476 aa24.74■■□□□ 1.55
HLA-A-209ENST00000638375 ZNF34Q8IZ26 560 aa24.74■■□□□ 1.55
HLA-A-209ENST00000638375 DNAAF4Q8WXU2 420 aa24.74■■□□□ 1.55
HLA-A-209ENST00000638375 SGIP1Q9BQI5 828 aa24.74■■□□□ 1.55
HLA-A-209ENST00000638375 METTL22Q9BUU2 404 aaPredicted RBP24.74■■□□□ 1.55
HLA-A-209ENST00000638375 NIP7Q9Y221 180 aaKnown RBP eCLIP24.74■■□□□ 1.55
HLA-A-209ENST00000638375 UBN2Q6ZU65 1347 aa24.73■■□□□ 1.55
HLA-A-209ENST00000638375 GPTP24298 496 aa24.73■■□□□ 1.55
HLA-A-209ENST00000638375 PTGER2P43116 358 aa24.73■■□□□ 1.55
HLA-A-209ENST00000638375 HSP90AB3PQ58FF7 597 aa24.73■■□□□ 1.55
HLA-A-209ENST00000638375 MYD88Q99836 296 aa24.73■■□□□ 1.55
HLA-A-209ENST00000638375 POLRMTO00411 1230 aaKnown RBP24.72■■□□□ 1.55
HLA-A-209ENST00000638375 ISCA1Q9BUE6 129 aa24.72■■□□□ 1.55
HLA-A-209ENST00000638375 SPON1Q9HCB6 807 aa24.72■■□□□ 1.55
HLA-A-209ENST00000638375 ANKRD36CQ5JPF3 1778 aa24.72■■□□□ 1.55
HLA-A-209ENST00000638375 ATP5J2-PTCD1G3V325 749 aa24.71■■□□□ 1.55
HLA-A-209ENST00000638375 FRAT1Q92837 279 aaPredicted RBP24.71■■□□□ 1.55
HLA-A-209ENST00000638375 SETDB2Q96T68 719 aa24.71■■□□□ 1.55
HLA-A-209ENST00000638375 IGKV5-2P06315 115 aa24.7■■□□□ 1.54
HLA-A-209ENST00000638375 ARHGAP45Q92619 1136 aa24.7■■□□□ 1.54
HLA-A-209ENST00000638375 TNNQ9UQP3 1299 aa24.7■■□□□ 1.54
HLA-A-209ENST00000638375 CARMIL3Q8ND23 1372 aa24.69■■□□□ 1.54
HLA-A-209ENST00000638375 NLRP10Q86W26 655 aa24.69■■□□□ 1.54
HLA-A-209ENST00000638375 API5Q9BZZ5 524 aaKnown RBP24.69■■□□□ 1.54
HLA-A-209ENST00000638375 SERPINB2P05120 415 aa24.68■■□□□ 1.54
HLA-A-209ENST00000638375 TRIM27P14373 513 aa24.68■■□□□ 1.54
HLA-A-209ENST00000638375 POLD1P28340 1107 aa24.68■■□□□ 1.54
HLA-A-209ENST00000638375 TRIM28Q13263 835 aaKnown RBP24.68■■□□□ 1.54
HLA-A-209ENST00000638375 PARP3Q9Y6F1 533 aa24.68■■□□□ 1.54
HLA-A-209ENST00000638375 IPO8O15397 1037 aaKnown RBP24.67■■□□□ 1.54
HLA-A-209ENST00000638375 NEXNQ0ZGT2 675 aa24.67■■□□□ 1.54
HLA-A-209ENST00000638375 PARP10Q53GL7 1025 aa24.67■■□□□ 1.54
HLA-A-209ENST00000638375 BEND3Q5T5X7 828 aa24.67■■□□□ 1.54
HLA-A-209ENST00000638375 SUSD4Q5VX71 490 aa24.67■■□□□ 1.54
HLA-A-209ENST00000638375 ZKSCAN2Q63HK3 967 aa24.67■■□□□ 1.54
HLA-A-209ENST00000638375 SLC4A10Q6U841 1118 aa24.67■■□□□ 1.54
HLA-A-209ENST00000638375 ATF7IPQ6VMQ6 1270 aa24.67■■□□□ 1.54
HLA-A-209ENST00000638375 FAM177BA6PVY3 158 aa24.66■■□□□ 1.54
HLA-A-209ENST00000638375 CWF19L2Q2TBE0 894 aaKnown RBP24.66■■□□□ 1.54
HLA-A-209ENST00000638375 PXDNLA1KZ92 1463 aa24.65■■□□□ 1.54
HLA-A-209ENST00000638375 NEURL1BA8MQ27 555 aa24.65■■□□□ 1.54
HLA-A-209ENST00000638375 LINS1Q8NG48 757 aa24.65■■□□□ 1.54
HLA-A-209ENST00000638375 NRXN2Q9P2S2 1712 aa24.65■■□□□ 1.54
HLA-A-209ENST00000638375 ABCC4O15439 1325 aa24.64■■□□□ 1.54
HLA-A-209ENST00000638375 NTSR2O95665 410 aa24.64■■□□□ 1.54
HLA-A-209ENST00000638375 NBPF5PQ86XG9 351 aaPredicted RBP24.64■■□□□ 1.54
HLA-A-209ENST00000638375 IBTKQ9P2D0 1353 aaPredicted RBP24.64■■□□□ 1.53
HLA-A-209ENST00000638375 AFDNP55196 1824 aaKnown RBP24.63■■□□□ 1.53
HLA-A-209ENST00000638375 PLIN1O60240 522 aa24.63■■□□□ 1.53
HLA-A-209ENST00000638375 PRR5LQ6MZQ0 368 aa24.63■■□□□ 1.53
HLA-A-209ENST00000638375 CCDC191Q8NCU4 936 aa24.63■■□□□ 1.53
HLA-A-209ENST00000638375 PPP1R42Q7Z4L9 355 aa24.62■■□□□ 1.53
HLA-A-209ENST00000638375 CLUAP1Q96AJ1 413 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 270.3 ms