RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 MYD88Q99836 296 aa26.23■■□□□ 1.79
CLN6-224ENST00000638076 METTL22Q9BUU2 404 aaPredicted RBP26.23■■□□□ 1.79
CLN6-224ENST00000638076 ANKRD13DQ6ZTN6 518 aa26.23■■□□□ 1.79
CLN6-224ENST00000638076 ERC1Q8IUD2 1116 aa26.23■■□□□ 1.79
CLN6-224ENST00000638076 USP42Q9H9J4 1324 aaKnown RBP26.23■■□□□ 1.79
CLN6-224ENST00000638076 ZCRB1Q8TBF4 217 aaKnown RBP26.22■■□□□ 1.79
CLN6-224ENST00000638076 TTC41PQ6P2S7 1318 aa26.22■■□□□ 1.79
CLN6-224ENST00000638076 PCDH11XQ9BZA7 1347 aa26.22■■□□□ 1.79
CLN6-224ENST00000638076 PCDH11YQ9BZA8 1340 aa26.22■■□□□ 1.79
CLN6-224ENST00000638076 CNTROBQ8N137 903 aa26.22■■□□□ 1.79
CLN6-224ENST00000638076 IL25Q9H293 177 aa26.22■■□□□ 1.79
CLN6-224ENST00000638076 COL5A2P05997 1499 aaPredicted RBP26.21■■□□□ 1.79
CLN6-224ENST00000638076 GCKRQ14397 625 aa26.21■■□□□ 1.79
CLN6-224ENST00000638076 GBP4Q96PP9 640 aa26.21■■□□□ 1.79
CLN6-224ENST00000638076 PALD1Q9ULE6 856 aa26.21■■□□□ 1.79
CLN6-224ENST00000638076 TRAK2O60296 914 aa26.2■■□□□ 1.79
CLN6-224ENST00000638076 GLRX3O76003 335 aaKnown RBP26.2■■□□□ 1.78
CLN6-224ENST00000638076 PARP4Q9UKK3 1724 aaKnown RBP26.2■■□□□ 1.78
CLN6-224ENST00000638076 NEK4P51957 841 aa26.19■■□□□ 1.78
CLN6-224ENST00000638076 ANAPC15P60006 121 aa26.19■■□□□ 1.78
CLN6-224ENST00000638076 AK9Q5TCS8 1911 aa26.18■■□□□ 1.78
CLN6-224ENST00000638076 IFIT2P09913 472 aaKnown RBP26.18■■□□□ 1.78
CLN6-224ENST00000638076 SSFA2P28290 1259 aa26.17■■□□□ 1.78
CLN6-224ENST00000638076 G3BP1Q13283 466 aaKnown RBP eCLIP26.17■■□□□ 1.78
CLN6-224ENST00000638076 ECHDC1Q9NTX5 307 aa26.17■■□□□ 1.78
CLN6-224ENST00000638076 SASH1O94885 1247 aa26.16■■□□□ 1.78
CLN6-224ENST00000638076 SGSM2O43147 1006 aa26.16■■□□□ 1.78
CLN6-224ENST00000638076 EPB41L2O43491 1005 aaKnown RBP26.16■■□□□ 1.78
CLN6-224ENST00000638076 IL2RBP14784 551 aa26.16■■□□□ 1.78
CLN6-224ENST00000638076 AACSQ86V21 672 aa26.16■■□□□ 1.78
CLN6-224ENST00000638076 GPATCH3Q96I76 525 aa26.16■■□□□ 1.78
CLN6-224ENST00000638076 STRN4Q9NRL3 753 aa26.16■■□□□ 1.78
CLN6-224ENST00000638076 GLI3P10071 1580 aa26.16■■□□□ 1.78
CLN6-224ENST00000638076 CARD10Q9BWT7 1032 aa26.15■■□□□ 1.78
CLN6-224ENST00000638076 EPHA10Q5JZY3 1008 aa26.15■■□□□ 1.78
CLN6-224ENST00000638076 GZF1Q9H116 711 aaPredicted RBP26.15■■□□□ 1.78
CLN6-224ENST00000638076 ERVV-2B6SEH9 535 aa26.14■■□□□ 1.78
CLN6-224ENST00000638076 SIL1Q9H173 461 aa26.14■■□□□ 1.78
CLN6-224ENST00000638076 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.14■■□□□ 1.78
CLN6-224ENST00000638076 CWC22Q9HCG8 908 aaKnown RBP26.14■■□□□ 1.77
CLN6-224ENST00000638076 ZGPATQ8N5A5 531 aaKnown RBP26.13■■□□□ 1.77
CLN6-224ENST00000638076 IL17RAQ96F46 866 aa26.13■■□□□ 1.77
CLN6-224ENST00000638076 ABCA3Q99758 1704 aa26.13■■□□□ 1.77
CLN6-224ENST00000638076 KLHDC4Q8TBB5 520 aa26.13■■□□□ 1.77
CLN6-224ENST00000638076 DDX54Q8TDD1 881 aaKnown RBP26.13■■□□□ 1.77
CLN6-224ENST00000638076 JARID2Q92833 1246 aaPredicted RBP26.13■■□□□ 1.77
CLN6-224ENST00000638076 LAMB4A4D0S4 1761 aa26.12■■□□□ 1.77
CLN6-224ENST00000638076 HSPA4P34932 840 aa26.12■■□□□ 1.77
CLN6-224ENST00000638076 EVA1CP58658 441 aa26.12■■□□□ 1.77
CLN6-224ENST00000638076 NKX1-1Q15270 411 aaPredicted RBP26.12■■□□□ 1.77
CLN6-224ENST00000638076 CWC27Q6UX04 472 aaKnown RBP26.12■■□□□ 1.77
CLN6-224ENST00000638076 EAF2Q96CJ1 260 aaPredicted RBP26.12■■□□□ 1.77
CLN6-224ENST00000638076 MCM2P49736 904 aa26.11■■□□□ 1.77
CLN6-224ENST00000638076 NUCB2P80303 420 aa26.11■■□□□ 1.77
CLN6-224ENST00000638076 ATP5J2-PTCD1G3V325 749 aa26.11■■□□□ 1.77
CLN6-224ENST00000638076 PTCD1O75127 700 aaKnown RBP26.11■■□□□ 1.77
CLN6-224ENST00000638076 PLBD2Q8NHP8 589 aa26.11■■□□□ 1.77
CLN6-224ENST00000638076 RAD50Q92878 1312 aa26.11■■□□□ 1.77
CLN6-224ENST00000638076 NBPF26B4DH59 902 aa26.1■■□□□ 1.77
CLN6-224ENST00000638076 NBPF14Q5TI25 921 aa26.1■■□□□ 1.77
CLN6-224ENST00000638076 NBPF10Q6P3W6 841 aaKnown RBP26.1■■□□□ 1.77
CLN6-224ENST00000638076 CLEC17AQ6ZS10 378 aa26.1■■□□□ 1.77
CLN6-224ENST00000638076 UBE3BQ7Z3V4 1068 aa26.1■■□□□ 1.77
CLN6-224ENST00000638076 NBPF15Q8N660 670 aa26.1■■□□□ 1.77
CLN6-224ENST00000638076 TMX3Q96JJ7 454 aa26.1■■□□□ 1.77
CLN6-224ENST00000638076 CCDC8Q9H0W5 538 aaPredicted RBP26.1■■□□□ 1.77
CLN6-224ENST00000638076 ERBB4Q15303 1308 aa26.09■■□□□ 1.77
CLN6-224ENST00000638076 LSG1Q9H089 658 aaKnown RBP26.09■■□□□ 1.77
CLN6-224ENST00000638076 ARFGEF2Q9Y6D5 1785 aa26.09■■□□□ 1.77
CLN6-224ENST00000638076 DIAPH3Q9NSV4 1193 aa26.09■■□□□ 1.77
CLN6-224ENST00000638076 CYP2E1P05181 493 aaPredicted RBP26.08■■□□□ 1.77
CLN6-224ENST00000638076 BRPF3Q9ULD4 1205 aa26.08■■□□□ 1.77
CLN6-224ENST00000638076 A0A087WZG4 1122 aa26.08■■□□□ 1.76
CLN6-224ENST00000638076 PKP1Q13835 747 aa26.08■■□□□ 1.76
CLN6-224ENST00000638076 UPF3BQ9BZI7 483 aaKnown RBP26.08■■□□□ 1.76
CLN6-224ENST00000638076 AFDNP55196 1824 aaKnown RBP26.07■■□□□ 1.76
CLN6-224ENST00000638076 PTMSP20962 102 aa26.07■■□□□ 1.76
CLN6-224ENST00000638076 KIAA1211Q6ZU35 1233 aa26.07■■□□□ 1.76
CLN6-224ENST00000638076 EVI5LQ96CN4 794 aa26.07■■□□□ 1.76
CLN6-224ENST00000638076 TLR7Q9NYK1 1049 aaKnown RBP26.07■■□□□ 1.76
CLN6-224ENST00000638076 BAG4O95429 457 aaKnown RBP26.06■■□□□ 1.76
CLN6-224ENST00000638076 RUFY2Q8WXA3 655 aa26.06■■□□□ 1.76
CLN6-224ENST00000638076 KCPQ6ZWJ8 1503 aa26.06■■□□□ 1.76
CLN6-224ENST00000638076 COPRSQ9NQ92 184 aa26.05■■□□□ 1.76
CLN6-224ENST00000638076 UBR2Q8IWV8 1755 aa26.05■■□□□ 1.76
CLN6-224ENST00000638076 NHSL1Q5SYE7 1610 aa26.05■■□□□ 1.76
CLN6-224ENST00000638076 RABL6Q3YEC7 729 aaPredicted RBP26.05■■□□□ 1.76
CLN6-224ENST00000638076 NOL8Q76FK4 1167 aaKnown RBP26.05■■□□□ 1.76
CLN6-224ENST00000638076 COL15A1P39059 1388 aa26.05■■□□□ 1.76
CLN6-224ENST00000638076 GOLGA6L22H0YM25 854 aa26.04■■□□□ 1.76
CLN6-224ENST00000638076 A1BGP04217 495 aa26.04■■□□□ 1.76
CLN6-224ENST00000638076 RFX5P48382 616 aaPredicted RBP26.04■■□□□ 1.76
CLN6-224ENST00000638076 TTLL7Q6ZT98 887 aa26.04■■□□□ 1.76
CLN6-224ENST00000638076 SHANK3Q9BYB0 1731 aa26.04■■□□□ 1.76
CLN6-224ENST00000638076 CASP7P55210 303 aa26.04■■□□□ 1.76
CLN6-224ENST00000638076 PTPN12Q05209 780 aaKnown RBP26.04■■□□□ 1.76
CLN6-224ENST00000638076 L1TD1Q5T7N2 865 aaKnown RBP26.04■■□□□ 1.76
CLN6-224ENST00000638076 SKOR2Q2VWA4 1001 aaPredicted RBP26.03■■□□□ 1.76
CLN6-224ENST00000638076 SNX14Q9Y5W7 946 aa26.03■■□□□ 1.76
CLN6-224ENST00000638076 CUL4AQ13619 759 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms