RNA–Protein interactions for RNA: ENST00000637842.1

RBMS3-220, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 1,458 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-220ENST00000637842 BCL2L12Q9HB09 334 aa12.81□□□□□ -0.36
RBMS3-220ENST00000637842 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
RBMS3-220ENST00000637842 ZNF541Q9H0D2 1346 aa12.81□□□□□ -0.36
RBMS3-220ENST00000637842 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
RBMS3-220ENST00000637842 STYK1Q6J9G0 422 aa12.8□□□□□ -0.36
RBMS3-220ENST00000637842 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
RBMS3-220ENST00000637842 GPC2Q8N158 579 aa12.8□□□□□ -0.36
RBMS3-220ENST00000637842 HHIPL1Q96JK4 782 aa12.8□□□□□ -0.36
RBMS3-220ENST00000637842 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
RBMS3-220ENST00000637842 ADAMTSL1Q8N6G6 1762 aa12.8□□□□□ -0.36
RBMS3-220ENST00000637842 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.36
RBMS3-220ENST00000637842 CIAPIN1Q6FI81 312 aa12.79□□□□□ -0.36
RBMS3-220ENST00000637842 PRPF40BQ6NWY9 871 aaKnown RBP12.79□□□□□ -0.36
RBMS3-220ENST00000637842 SAPCD2Q86UD0 394 aa12.79□□□□□ -0.36
RBMS3-220ENST00000637842 NFATC2IPQ8NCF5 419 aa12.79□□□□□ -0.36
RBMS3-220ENST00000637842 WASHC2AQ641Q2 1341 aa12.79□□□□□ -0.36
RBMS3-220ENST00000637842 LTBP1Q14766 1721 aa12.79□□□□□ -0.36
RBMS3-220ENST00000637842 AFDNP55196 1824 aaKnown RBP12.79□□□□□ -0.36
RBMS3-220ENST00000637842 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
RBMS3-220ENST00000637842 LMOD1P29536 600 aaPredicted RBP12.78□□□□□ -0.36
RBMS3-220ENST00000637842 MTHFSP49914 203 aa12.78□□□□□ -0.36
RBMS3-220ENST00000637842 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
RBMS3-220ENST00000637842 CCDC93Q567U6 631 aa12.78□□□□□ -0.36
RBMS3-220ENST00000637842 DNAJC10Q8IXB1 793 aa12.78□□□□□ -0.36
RBMS3-220ENST00000637842 COL15A1P39059 1388 aa12.78□□□□□ -0.36
RBMS3-220ENST00000637842 FZD9O00144 591 aa12.78□□□□□ -0.36
RBMS3-220ENST00000637842 FKBP4Q02790 459 aaKnown RBP eCLIP12.78□□□□□ -0.36
RBMS3-220ENST00000637842 MASTLQ96GX5 879 aa12.78□□□□□ -0.36
RBMS3-220ENST00000637842 TRAF5O00463 557 aa12.77□□□□□ -0.37
RBMS3-220ENST00000637842 SRGNP10124 158 aa12.77□□□□□ -0.37
RBMS3-220ENST00000637842 CYP19A1P11511 503 aaPredicted RBP12.77□□□□□ -0.37
RBMS3-220ENST00000637842 NOGQ13253 232 aa12.77□□□□□ -0.37
RBMS3-220ENST00000637842 PRR5LQ6MZQ0 368 aa12.77□□□□□ -0.37
RBMS3-220ENST00000637842 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.37
RBMS3-220ENST00000637842 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
RBMS3-220ENST00000637842 USP50Q70EL3 339 aaPredicted RBP12.76□□□□□ -0.37
RBMS3-220ENST00000637842 RTKN2Q8IZC4 609 aa12.76□□□□□ -0.37
RBMS3-220ENST00000637842 C7orf43Q8WVR3 580 aa12.76□□□□□ -0.37
RBMS3-220ENST00000637842 ADAMTS7Q9UKP4 1686 aa12.75□□□□□ -0.37
RBMS3-220ENST00000637842 NPHP1O15259 732 aa12.75□□□□□ -0.37
RBMS3-220ENST00000637842 ZNF530Q6P9A1 599 aaPredicted RBP12.75□□□□□ -0.37
RBMS3-220ENST00000637842 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
RBMS3-220ENST00000637842 A0A087WZG4 1122 aa12.74□□□□□ -0.37
RBMS3-220ENST00000637842 CELF2O95319 508 aaKnown RBP12.74□□□□□ -0.37
RBMS3-220ENST00000637842 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
RBMS3-220ENST00000637842 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
RBMS3-220ENST00000637842 TBC1D9BQ66K14 1250 aa12.74□□□□□ -0.37
RBMS3-220ENST00000637842 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
RBMS3-220ENST00000637842 SAGE1Q9NXZ1 904 aa12.74□□□□□ -0.37
RBMS3-220ENST00000637842 ZBTB1Q9Y2K1 713 aa12.74□□□□□ -0.37
RBMS3-220ENST00000637842 DLL1O00548 723 aa12.73□□□□□ -0.37
RBMS3-220ENST00000637842 IARSP41252 1262 aaKnown RBP12.73□□□□□ -0.37
RBMS3-220ENST00000637842 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
RBMS3-220ENST00000637842 CTU1Q7Z7A3 348 aaKnown RBP12.73□□□□□ -0.37
RBMS3-220ENST00000637842 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
RBMS3-220ENST00000637842 EPS15P42566 896 aa12.72□□□□□ -0.37
RBMS3-220ENST00000637842 ST5P78524 1137 aa12.72□□□□□ -0.37
RBMS3-220ENST00000637842 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
RBMS3-220ENST00000637842 CANXP27824 592 aaKnown RBP12.72□□□□□ -0.37
RBMS3-220ENST00000637842 SYNE4Q8N205 404 aa12.72□□□□□ -0.37
RBMS3-220ENST00000637842 SLX4Q8IY92 1834 aa12.71□□□□□ -0.37
RBMS3-220ENST00000637842 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.38
RBMS3-220ENST00000637842 SETDB2Q96T68 719 aa12.71□□□□□ -0.38
RBMS3-220ENST00000637842 HPS5Q9UPZ3 1129 aa12.71□□□□□ -0.38
RBMS3-220ENST00000637842 TJP1Q07157 1748 aa12.7□□□□□ -0.38
RBMS3-220ENST00000637842 NPR1P16066 1061 aa12.7□□□□□ -0.38
RBMS3-220ENST00000637842 SCNN1DP51172 638 aa12.7□□□□□ -0.38
RBMS3-220ENST00000637842 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
RBMS3-220ENST00000637842 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
RBMS3-220ENST00000637842 PKN2Q16513 984 aaKnown RBP12.7□□□□□ -0.38
RBMS3-220ENST00000637842 TESK2Q96S53 571 aa12.7□□□□□ -0.38
RBMS3-220ENST00000637842 ZIC5Q96T25 663 aa12.7□□□□□ -0.38
RBMS3-220ENST00000637842 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
RBMS3-220ENST00000637842 TRPA1O75762 1119 aa12.68□□□□□ -0.38
RBMS3-220ENST00000637842 SIN3AQ96ST3 1273 aa12.68□□□□□ -0.38
RBMS3-220ENST00000637842 ZNF408Q9H9D4 720 aa12.68□□□□□ -0.38
RBMS3-220ENST00000637842 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
RBMS3-220ENST00000637842 ANKRD31Q8N7Z5 1873 aa12.68□□□□□ -0.38
RBMS3-220ENST00000637842 TRPM7Q96QT4 1865 aa12.68□□□□□ -0.38
RBMS3-220ENST00000637842 STARD3NLO95772 234 aa12.67□□□□□ -0.38
RBMS3-220ENST00000637842 NEUROD1Q13562 356 aa12.67□□□□□ -0.38
RBMS3-220ENST00000637842 PSMD1Q99460 953 aa12.67□□□□□ -0.38
RBMS3-220ENST00000637842 ADARB2Q9NS39 739 aaKnown RBP12.67□□□□□ -0.38
RBMS3-220ENST00000637842 RNF216Q9NWF9 866 aaPredicted RBP12.67□□□□□ -0.38
RBMS3-220ENST00000637842 POLKQ9UBT6 870 aa12.67□□□□□ -0.38
RBMS3-220ENST00000637842 ALDH1B1P30837 517 aa12.66□□□□□ -0.38
RBMS3-220ENST00000637842 HUNKP57058 714 aa12.66□□□□□ -0.38
RBMS3-220ENST00000637842 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
RBMS3-220ENST00000637842 GLIS2Q9BZE0 524 aaPredicted RBP12.66□□□□□ -0.38
RBMS3-220ENST00000637842 SLC52A2Q9HAB3 445 aa12.66□□□□□ -0.38
RBMS3-220ENST00000637842 TBC1D2BQ9UPU7 963 aa12.66□□□□□ -0.38
RBMS3-220ENST00000637842 COL11A2P13942 1736 aaPredicted RBP12.66□□□□□ -0.38
RBMS3-220ENST00000637842 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
RBMS3-220ENST00000637842 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
RBMS3-220ENST00000637842 OLFM4Q6UX06 510 aa12.65□□□□□ -0.38
RBMS3-220ENST00000637842 CDC37L1Q7L3B6 337 aa12.65□□□□□ -0.38
RBMS3-220ENST00000637842 PGAP2Q9UHJ9 254 aa12.65□□□□□ -0.38
RBMS3-220ENST00000637842 RGMBQ6NW40 437 aa12.65□□□□□ -0.38
RBMS3-220ENST00000637842 ZC3H15Q8WU90 426 aaKnown RBP12.65□□□□□ -0.38
RBMS3-220ENST00000637842 KLRG2A4D1S0 409 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms