RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 TNRC6CQ9HCJ0 1690 aaKnown RBP16.84■□□□□ 0.29
CTSD-210ENST00000637381 DICER1Q9UPY3 1922 aaKnown RBP16.84■□□□□ 0.29
CTSD-210ENST00000637381 NFKBIEO00221 500 aa16.83■□□□□ 0.28
CTSD-210ENST00000637381 SRGNP10124 158 aa16.83■□□□□ 0.28
CTSD-210ENST00000637381 NUP98P52948 1817 aa16.83■□□□□ 0.28
CTSD-210ENST00000637381 SLX4Q8IY92 1834 aa16.83■□□□□ 0.28
CTSD-210ENST00000637381 CCDC24Q8N4L8 307 aa16.83■□□□□ 0.28
CTSD-210ENST00000637381 KDM2BQ8NHM5 1336 aa16.82■□□□□ 0.28
CTSD-210ENST00000637381 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
CTSD-210ENST00000637381 RASSF7Q02833 373 aa16.82■□□□□ 0.28
CTSD-210ENST00000637381 DDX10Q13206 875 aaKnown RBP16.82■□□□□ 0.28
CTSD-210ENST00000637381 STYK1Q6J9G0 422 aa16.82■□□□□ 0.28
CTSD-210ENST00000637381 THUMPD2Q9BTF0 503 aaKnown RBP16.82■□□□□ 0.28
CTSD-210ENST00000637381 BABAM1Q9NWV8 329 aa16.82■□□□□ 0.28
CTSD-210ENST00000637381 ERVV-1B6SEH8 477 aa16.81■□□□□ 0.28
CTSD-210ENST00000637381 ST5P78524 1137 aa16.81■□□□□ 0.28
CTSD-210ENST00000637381 HLFQ16534 295 aa16.81■□□□□ 0.28
CTSD-210ENST00000637381 CNKSR1Q969H4 720 aa16.81■□□□□ 0.28
CTSD-210ENST00000637381 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTSD-210ENST00000637381 CACNA1SQ13698 1873 aa16.8■□□□□ 0.28
CTSD-210ENST00000637381 MYBBP1AQ9BQG0 1328 aaKnown RBP16.8■□□□□ 0.28
CTSD-210ENST00000637381 LTBP3Q9NS15 1303 aa16.8■□□□□ 0.28
CTSD-210ENST00000637381 TIAM2Q8IVF5 1701 aa16.8■□□□□ 0.28
CTSD-210ENST00000637381 TPTE2Q6XPS3 522 aa16.8■□□□□ 0.28
CTSD-210ENST00000637381 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
CTSD-210ENST00000637381 RBM46Q8TBY0 533 aaKnown RBP16.8■□□□□ 0.28
CTSD-210ENST00000637381 MASTLQ96GX5 879 aa16.8■□□□□ 0.28
CTSD-210ENST00000637381 GLTPD2A6NH11 291 aa16.79■□□□□ 0.28
CTSD-210ENST00000637381 TMPOP42166 694 aaKnown RBP16.79■□□□□ 0.28
CTSD-210ENST00000637381 RIPK4P57078 832 aa16.79■□□□□ 0.28
CTSD-210ENST00000637381 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
CTSD-210ENST00000637381 NIP7Q9Y221 180 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTSD-210ENST00000637381 ERBB4Q15303 1308 aa16.78■□□□□ 0.28
CTSD-210ENST00000637381 C21orf2O43822 256 aa16.78■□□□□ 0.28
CTSD-210ENST00000637381 RRAGCQ9HB90 399 aa16.78■□□□□ 0.28
CTSD-210ENST00000637381 MAP3K15Q6ZN16 1313 aa16.77■□□□□ 0.28
CTSD-210ENST00000637381 PRPF40BQ6NWY9 871 aaKnown RBP16.77■□□□□ 0.28
CTSD-210ENST00000637381 NPHP1O15259 732 aa16.76■□□□□ 0.27
CTSD-210ENST00000637381 NPR1P16066 1061 aa16.76■□□□□ 0.27
CTSD-210ENST00000637381 APLP1P51693 650 aa16.76■□□□□ 0.27
CTSD-210ENST00000637381 FSTL1Q12841 308 aa16.76■□□□□ 0.27
CTSD-210ENST00000637381 SOGA3Q5TF21 947 aa16.76■□□□□ 0.27
CTSD-210ENST00000637381 LRP10Q7Z4F1 713 aa16.76■□□□□ 0.27
CTSD-210ENST00000637381 RRP7AQ9Y3A4 280 aaKnown RBP16.76■□□□□ 0.27
CTSD-210ENST00000637381 LMOD3Q0VAK6 560 aa16.75■□□□□ 0.27
CTSD-210ENST00000637381 PDIA6Q15084 440 aa16.75■□□□□ 0.27
CTSD-210ENST00000637381 TTLL7Q6ZT98 887 aa16.75■□□□□ 0.27
CTSD-210ENST00000637381 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
CTSD-210ENST00000637381 WDR90Q96KV7 1748 aa16.75■□□□□ 0.27
CTSD-210ENST00000637381 RIC1Q4ADV7 1423 aa16.74■□□□□ 0.27
CTSD-210ENST00000637381 VEGFAP15692 232 aaPredicted RBP16.74■□□□□ 0.27
CTSD-210ENST00000637381 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
CTSD-210ENST00000637381 DNAJC5GQ8N7S2 189 aa16.74■□□□□ 0.27
CTSD-210ENST00000637381 IBTKQ9P2D0 1353 aaPredicted RBP16.74■□□□□ 0.27
CTSD-210ENST00000637381 POTECB2RU33 542 aa16.73■□□□□ 0.27
CTSD-210ENST00000637381 CHL1O00533 1208 aa16.73■□□□□ 0.27
CTSD-210ENST00000637381 CRY2Q49AN0 593 aa16.73■□□□□ 0.27
CTSD-210ENST00000637381 C16orf71Q8IYS4 520 aaPredicted RBP16.73■□□□□ 0.27
CTSD-210ENST00000637381 NGEFQ8N5V2 710 aa16.73■□□□□ 0.27
CTSD-210ENST00000637381 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
CTSD-210ENST00000637381 NYXQ9GZU5 481 aa16.73■□□□□ 0.27
CTSD-210ENST00000637381 TAOK3Q9H2K8 898 aa16.73■□□□□ 0.27
CTSD-210ENST00000637381 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
CTSD-210ENST00000637381 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
CTSD-210ENST00000637381 MYL6BP14649 208 aa16.72■□□□□ 0.27
CTSD-210ENST00000637381 GIGYF2Q6Y7W6 1299 aaKnown RBP16.72■□□□□ 0.27
CTSD-210ENST00000637381 KIF6Q6ZMV9 814 aa16.72■□□□□ 0.27
CTSD-210ENST00000637381 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
CTSD-210ENST00000637381 ADAMTS8Q9UP79 889 aa16.72■□□□□ 0.27
CTSD-210ENST00000637381 UBN2Q6ZU65 1347 aa16.71■□□□□ 0.27
CTSD-210ENST00000637381 ALDH1B1P30837 517 aa16.71■□□□□ 0.27
CTSD-210ENST00000637381 ERFEQ4G0M1 354 aa16.71■□□□□ 0.27
CTSD-210ENST00000637381 DPY19L2Q6NUT2 758 aa16.71■□□□□ 0.27
CTSD-210ENST00000637381 HOXA10P31260 410 aaPredicted RBP16.7■□□□□ 0.26
CTSD-210ENST00000637381 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
CTSD-210ENST00000637381 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
CTSD-210ENST00000637381 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
CTSD-210ENST00000637381 ABCC12Q96J65 1359 aa16.69■□□□□ 0.26
CTSD-210ENST00000637381 FAM177BA6PVY3 158 aa16.69■□□□□ 0.26
CTSD-210ENST00000637381 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
CTSD-210ENST00000637381 CCDC93Q567U6 631 aa16.69■□□□□ 0.26
CTSD-210ENST00000637381 SUSD4Q5VX71 490 aa16.69■□□□□ 0.26
CTSD-210ENST00000637381 SMC1BQ8NDV3 1235 aa16.69■□□□□ 0.26
CTSD-210ENST00000637381 ANKRD36CQ5JPF3 1778 aa16.69■□□□□ 0.26
CTSD-210ENST00000637381 NTSR2O95665 410 aa16.68■□□□□ 0.26
CTSD-210ENST00000637381 FKBP4Q02790 459 aaKnown RBP eCLIP16.68■□□□□ 0.26
CTSD-210ENST00000637381 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.26
CTSD-210ENST00000637381 PROSER3Q2NL68 480 aa16.68■□□□□ 0.26
CTSD-210ENST00000637381 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
CTSD-210ENST00000637381 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
CTSD-210ENST00000637381 EIF2S2P20042 333 aaKnown RBP16.67■□□□□ 0.26
CTSD-210ENST00000637381 GPTP24298 496 aa16.67■□□□□ 0.26
CTSD-210ENST00000637381 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
CTSD-210ENST00000637381 PARP10Q53GL7 1025 aa16.67■□□□□ 0.26
CTSD-210ENST00000637381 SLC10A5Q5PT55 438 aa16.67■□□□□ 0.26
CTSD-210ENST00000637381 SCN4AP35499 1836 aa16.66■□□□□ 0.26
CTSD-210ENST00000637381 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
CTSD-210ENST00000637381 OLFM4Q6UX06 510 aa16.66■□□□□ 0.26
CTSD-210ENST00000637381 PPP1R42Q7Z4L9 355 aa16.66■□□□□ 0.26
CTSD-210ENST00000637381 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms