RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	WDR33	Q9C0J8	1336 aa	Known RBP	18.87	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CCDC6	Q16204	474 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	ZSCAN25	Q6NSZ9	544 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CDK19	Q9BWU1	502 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	JADE2	Q9NQC1	790 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CEP126	Q9P2H0	1117 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	UAP1	Q16222	522 aa	Predicted RBP	18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	NGLY1	Q96IV0	654 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	PDS5B	Q9NTI5	1447 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	TXLNB	Q8N3L3	684 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	SMC1B	Q8NDV3	1235 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CHD1L	Q86WJ1	897 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	NAPB	Q9H115	298 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CLGN	O14967	610 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	PTGS1	P23219	599 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	PPP2R1A	P30153	589 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	SPOUT1	Q5T280	376 aa	Known RBP	18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	EPSTI1	Q96J88	318 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	UTP14A	Q9BVJ6	771 aa	Known RBP	18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	ANKRD1	Q15327	319 aa		18.86	■□□□□ 0.61
CACNA1A-238	ENST00000637276	KRT13	P13646	458 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	GPIHBP1	Q8IV16	184 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	EXOC6B	Q9Y2D4	811 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CALM1	P0DP23	149 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CALM2	P0DP24	149 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CALM3	P0DP25	149 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	MTERF4	Q7Z6M4	381 aa	Known RBP	18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	FBF1	Q8TES7	1133 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	PSMD6	Q15008	389 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	SMARCA2	P51531	1590 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	SORBS3	O60504	671 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	SNRK	Q9NRH2	765 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CABP1	Q9NZU7	370 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	GINS2	Q9Y248	185 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CCDC7	Q96M83	1385 aa		18.85	■□□□□ 0.61
CACNA1A-238	ENST00000637276	PRPF40B	Q6NWY9	871 aa	Known RBP	18.84	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CTR9	Q6PD62	1173 aa		18.84	■□□□□ 0.61
CACNA1A-238	ENST00000637276	PPP1R21	Q6ZMI0	780 aa		18.84	■□□□□ 0.61
CACNA1A-238	ENST00000637276	MAP7D1	Q3KQU3	841 aa		18.84	■□□□□ 0.61
CACNA1A-238	ENST00000637276	KIF5C	O60282	957 aa		18.83	■□□□□ 0.61
CACNA1A-238	ENST00000637276	DAAM2	Q86T65	1068 aa		18.83	■□□□□ 0.61
CACNA1A-238	ENST00000637276	RPUSD2	Q8IZ73	545 aa	Known RBP	18.83	■□□□□ 0.61
CACNA1A-238	ENST00000637276	PDCL2	Q8N4E4	241 aa		18.83	■□□□□ 0.61
CACNA1A-238	ENST00000637276	UBXN4	Q92575	508 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	SELENOS	Q9BQE4	189 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	SRCIN1	Q9C0H9	1055 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	GDPD2	Q9HCC8	539 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	PTPRG	P23470	1445 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	GOLGA8A	A7E2F4	631 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	GOLGA8B	A8MQT2	603 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TMOD3	Q9NYL9	352 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	CRCP	O75575	148 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	CDKL5	O76039	1030 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	GJA3	Q9Y6H8	435 aa		18.83	■□□□□ 0.6
CACNA1A-238	ENST00000637276	THUMPD2	Q9BTF0	503 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	RIMBP2	O15034	1052 aa		18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	ATF7IP	Q6VMQ6	1270 aa		18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	DNAJC21	Q5F1R6	531 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	MCM2	P49736	904 aa		18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	SSRP1	Q08945	709 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	GCC1	Q96CN9	775 aa		18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	SLC12A7	Q9Y666	1083 aa		18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TCHP	Q9BT92	498 aa		18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	ANO3	Q9BYT9	981 aa		18.82	■□□□□ 0.6
CACNA1A-238	ENST00000637276	PLIN2	Q99541	437 aa		18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	CEP131	Q9UPN4	1083 aa		18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TMEM266	Q2M3C6	531 aa		18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	CCDC25	Q86WR0	208 aa		18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	AFM	P43652	599 aa		18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TRMT112	Q9UI30	125 aa	Known RBP	18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	PPAN	Q9NQ55	473 aa	Known RBP	18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TOP1	P11387	765 aa	Known RBP	18.81	■□□□□ 0.6
CACNA1A-238	ENST00000637276	DIXDC1	Q155Q3	683 aa		18.8	■□□□□ 0.6
CACNA1A-238	ENST00000637276	IFIT3	O14879	490 aa	Known RBP	18.8	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TTLL3	Q9Y4R7	772 aa		18.8	■□□□□ 0.6
CACNA1A-238	ENST00000637276	C16orf45	Q96MC5	204 aa	Predicted RBP	18.8	■□□□□ 0.6
CACNA1A-238	ENST00000637276	KRT9	P35527	623 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	ACTN2	P35609	894 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	NBPF1	Q3BBV0	1214 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	CCDC174	Q6PII3	467 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	VPS36	Q86VN1	386 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	CNNM3	Q8NE01	707 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TSHZ3	Q63HK5	1081 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	ALS2CR12	Q96Q35	445 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	SMTNL1	A8MU46	457 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	IFIT1	P09914	478 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	PLCB3	Q01970	1234 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	PDE1C	Q14123	709 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	RNF34	Q969K3	372 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	MCM10	Q7L590	875 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TMC6	Q7Z403	805 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	SLU7	O95391	586 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	BAG4	O95429	457 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	MAP3K11	Q16584	847 aa		18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TFIP11	Q9UBB9	837 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-238	ENST00000637276	DACT3	Q96B18	629 aa	Predicted RBP	18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms