RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 CCDC144CPQ8IYA2 1237 aa19.16■□□□□ 0.66
CLCN2-215ENST00000636661 NEK1Q96PY6 1258 aa19.16■□□□□ 0.66
CLCN2-215ENST00000636661 BICDL1Q6ZP65 573 aa19.15■□□□□ 0.66
CLCN2-215ENST00000636661 YTHDC2Q9H6S0 1430 aaKnown RBP19.15■□□□□ 0.66
CLCN2-215ENST00000636661 RIMS2Q9UQ26 1411 aa19.15■□□□□ 0.66
CLCN2-215ENST00000636661 FILIP1LQ4L180 1135 aa19.15■□□□□ 0.66
CLCN2-215ENST00000636661 ANKRD13DQ6ZTN6 518 aa19.15■□□□□ 0.66
CLCN2-215ENST00000636661 UBAC1Q9BSL1 405 aa19.15■□□□□ 0.66
CLCN2-215ENST00000636661 RAI14Q9P0K7 980 aa19.14■□□□□ 0.66
CLCN2-215ENST00000636661 MINDY4BA8MYZ0 360 aa19.14■□□□□ 0.65
CLCN2-215ENST00000636661 HSP90B2PQ58FF3 399 aa19.14■□□□□ 0.65
CLCN2-215ENST00000636661 PKNOX2Q96KN3 472 aa19.14■□□□□ 0.65
CLCN2-215ENST00000636661 ZNF521Q96K83 1311 aa19.14■□□□□ 0.65
CLCN2-215ENST00000636661 KLHL10Q6JEL2 608 aa19.14■□□□□ 0.65
CLCN2-215ENST00000636661 CHAMP1Q96JM3 812 aa19.14■□□□□ 0.65
CLCN2-215ENST00000636661 CEP89Q96ST8 783 aa19.14■□□□□ 0.65
CLCN2-215ENST00000636661 MBD5Q9P267 1494 aa19.13■□□□□ 0.65
CLCN2-215ENST00000636661 PNMA6EA0A0J9YXQ4 647 aa19.13■□□□□ 0.65
CLCN2-215ENST00000636661 GOLGA8BA8MQT2 603 aa19.13■□□□□ 0.65
CLCN2-215ENST00000636661 PTPN14Q15678 1187 aa19.13■□□□□ 0.65
CLCN2-215ENST00000636661 TRMT2AQ8IZ69 625 aaKnown RBP19.13■□□□□ 0.65
CLCN2-215ENST00000636661 GRM8O00222 908 aa19.13■□□□□ 0.65
CLCN2-215ENST00000636661 SFPQP23246 707 aaKnown RBP eCLIP19.13■□□□□ 0.65
CLCN2-215ENST00000636661 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
CLCN2-215ENST00000636661 DACT1Q9NYF0 836 aa19.13■□□□□ 0.65
CLCN2-215ENST00000636661 ANAPC15P60006 121 aa19.13■□□□□ 0.65
CLCN2-215ENST00000636661 TNNT1P13805 278 aa19.12■□□□□ 0.65
CLCN2-215ENST00000636661 IFIT5Q13325 482 aaKnown RBP19.12■□□□□ 0.65
CLCN2-215ENST00000636661 ZSCAN25Q6NSZ9 544 aa19.12■□□□□ 0.65
CLCN2-215ENST00000636661 ABCC1P33527 1531 aa19.12■□□□□ 0.65
CLCN2-215ENST00000636661 ANO10Q9NW15 660 aa19.12■□□□□ 0.65
CLCN2-215ENST00000636661 RBSNQ9H1K0 784 aa19.12■□□□□ 0.65
CLCN2-215ENST00000636661 CDKL5O76039 1030 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 PPFIBP1Q86W92 1011 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 CAGE1Q8TC20 777 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 TRIM34Q9BYJ4 488 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 FAM173BQ6P4H8 233 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 NUTM2BA6NNL0 878 aaPredicted RBP19.11■□□□□ 0.65
CLCN2-215ENST00000636661 NUTM2EB1AL46 878 aaPredicted RBP19.11■□□□□ 0.65
CLCN2-215ENST00000636661 ZNF213O14771 459 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 CHST3Q7LGC8 479 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 NUTM2AQ8IVF1 878 aaPredicted RBP19.11■□□□□ 0.65
CLCN2-215ENST00000636661 DDX19AQ9NUU7 478 aaKnown RBP19.11■□□□□ 0.65
CLCN2-215ENST00000636661 TNRQ92752 1358 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 CHL1O00533 1208 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 PDIA4P13667 645 aaKnown RBP19.11■□□□□ 0.65
CLCN2-215ENST00000636661 NMIQ13287 307 aaPredicted RBP19.11■□□□□ 0.65
CLCN2-215ENST00000636661 LMBR1LQ6UX01 489 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 USP16Q9Y5T5 823 aa19.11■□□□□ 0.65
CLCN2-215ENST00000636661 F13A1P00488 732 aa19.1■□□□□ 0.65
CLCN2-215ENST00000636661 UHRF1BP1LA0JNW5 1464 aa19.1■□□□□ 0.65
CLCN2-215ENST00000636661 KDM5CP41229 1560 aa19.1■□□□□ 0.65
CLCN2-215ENST00000636661 SOS1Q07889 1333 aaPredicted RBP19.1■□□□□ 0.65
CLCN2-215ENST00000636661 OFD1O75665 1012 aa19.1■□□□□ 0.65
CLCN2-215ENST00000636661 MICU3Q86XE3 530 aa19.1■□□□□ 0.65
CLCN2-215ENST00000636661 NAPBQ9H115 298 aa19.1■□□□□ 0.65
CLCN2-215ENST00000636661 KSR2Q6VAB6 950 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 KLHDC4Q8TBB5 520 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 ORC3Q9UBD5 711 aaPredicted RBP19.09■□□□□ 0.65
CLCN2-215ENST00000636661 ZKSCAN5Q9Y2L8 839 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 POGZQ7Z3K3 1410 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 SYT1P21579 422 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 ATP2B2Q01814 1243 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 TXLNAP40222 546 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 PKP1Q13835 747 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 LDHAL6AQ6ZMR3 332 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 CCAR1Q8IX12 1150 aaKnown RBP19.09■□□□□ 0.65
CLCN2-215ENST00000636661 TMX1Q9H3N1 280 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 GNL3LQ9NVN8 582 aaKnown RBP19.09■□□□□ 0.65
CLCN2-215ENST00000636661 MAST1Q9Y2H9 1570 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 STARD3NLO95772 234 aa19.09■□□□□ 0.65
CLCN2-215ENST00000636661 GSPT1P15170 499 aaKnown RBP19.09■□□□□ 0.65
CLCN2-215ENST00000636661 FLT4P35916 1363 aa19.08■□□□□ 0.65
CLCN2-215ENST00000636661 CCDC186Q7Z3E2 898 aa19.08■□□□□ 0.65
CLCN2-215ENST00000636661 IFNL2Q8IZJ0 200 aa19.08■□□□□ 0.65
CLCN2-215ENST00000636661 TMOD3Q9NYL9 352 aa19.08■□□□□ 0.65
CLCN2-215ENST00000636661 TRMT112Q9UI30 125 aaKnown RBP19.08■□□□□ 0.65
CLCN2-215ENST00000636661 AKAP2Q9Y2D5 859 aa19.08■□□□□ 0.65
CLCN2-215ENST00000636661 HSP90AA4PQ58FG1 418 aa19.08■□□□□ 0.64
CLCN2-215ENST00000636661 CABLES1Q8TDN4 633 aa19.08■□□□□ 0.64
CLCN2-215ENST00000636661 TTC21AQ8NDW8 1320 aa19.08■□□□□ 0.64
CLCN2-215ENST00000636661 SPDYE4A6NLX3 237 aa19.08■□□□□ 0.64
CLCN2-215ENST00000636661 NFATC2IPQ8NCF5 419 aa19.08■□□□□ 0.64
CLCN2-215ENST00000636661 ANO6Q4KMQ2 910 aa19.07■□□□□ 0.64
CLCN2-215ENST00000636661 PDCL3Q9H2J4 239 aa19.07■□□□□ 0.64
CLCN2-215ENST00000636661 HMGB1P09429 215 aaKnown RBP19.07■□□□□ 0.64
CLCN2-215ENST00000636661 NBPF7P0C2Y1 421 aaPredicted RBP19.07■□□□□ 0.64
CLCN2-215ENST00000636661 IKQ13123 557 aaPredicted RBP19.07■□□□□ 0.64
CLCN2-215ENST00000636661 UBXN4Q92575 508 aa19.07■□□□□ 0.64
CLCN2-215ENST00000636661 SMARCE1Q969G3 411 aa19.07■□□□□ 0.64
CLCN2-215ENST00000636661 NOLC1Q14978 699 aaKnown RBP eCLIP19.07■□□□□ 0.64
CLCN2-215ENST00000636661 DNAJC25Q9H1X3 360 aa19.07■□□□□ 0.64
CLCN2-215ENST00000636661 PBRM1Q86U86 1689 aa19.06■□□□□ 0.64
CLCN2-215ENST00000636661 SNRPA1P09661 255 aaKnown RBP19.06■□□□□ 0.64
CLCN2-215ENST00000636661 SMTNL1A8MU46 457 aa19.06■□□□□ 0.64
CLCN2-215ENST00000636661 URI1O94763 535 aaPredicted RBP19.06■□□□□ 0.64
CLCN2-215ENST00000636661 Q6ZUG5 572 aa19.06■□□□□ 0.64
CLCN2-215ENST00000636661 ERICH4A6NGS2 130 aa19.06■□□□□ 0.64
CLCN2-215ENST00000636661 SLC3A2P08195 630 aaKnown RBP19.06■□□□□ 0.64
CLCN2-215ENST00000636661 LINS1Q8NG48 757 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms