RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 ZBTB7BO15156 539 aaPredicted RBP2.58□□□□□ -2
SYNGAP1-215ENST00000636443 SLC10A3P09131 477 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 FOSL2P15408 326 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 EPS15P42566 896 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 TMEM31Q5JXX7 168 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 OTOP1Q7RTM1 612 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 ARHGEF25Q86VW2 580 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 JDP2Q8WYK2 163 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 UIMC1Q96RL1 719 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 LRFN3Q9BTN0 628 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 PRO3102Q9H379 93 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 GBA2Q9HCG7 927 aaPredicted RBP2.58□□□□□ -2
SYNGAP1-215ENST00000636443 ZNF277Q9NRM2 450 aaPredicted RBP2.58□□□□□ -2
SYNGAP1-215ENST00000636443 SRP68Q9UHB9 627 aaKnown RBP2.58□□□□□ -2
SYNGAP1-215ENST00000636443 DACH1Q9UI36 760 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 BCORQ6W2J9 1755 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 ITGB4P16144 1822 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 AFDNP55196 1824 aaKnown RBP2.58□□□□□ -2
SYNGAP1-215ENST00000636443 USP31Q70CQ4 1352 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 MKI67P46013 3256 aaKnown RBP2.58□□□□□ -2
SYNGAP1-215ENST00000636443 PIK3C2GO75747 1445 aa2.58□□□□□ -2
SYNGAP1-215ENST00000636443 SMG6Q86US8 1419 aaKnown RBP2.58□□□□□ -2
SYNGAP1-215ENST00000636443 KIAA0100Q14667 2235 aaKnown RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 FAM208AQ9UK61 1670 aaKnown RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 SPTBN5Q9NRC6 3674 aaKnown RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 FAM86C2PA6NEL3 165 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 POLRMTO00411 1230 aaKnown RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 ZPR1O75312 459 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 MKRN3Q13064 507 aaKnown RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 ITPK1Q13572 414 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 FKBP8Q14318 412 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 CCDC93Q567U6 631 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 CDC37L1Q7L3B6 337 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 USP48Q86UV5 1035 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 TDHQ8IZJ6 230 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 PPM1EQ8WY54 764 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 MYLIPQ8WY64 445 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 ARMC5Q96C12 935 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 ERO1AQ96HE7 468 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 CDX2Q99626 313 aaPredicted RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 RBM42Q9BTD8 480 aaKnown RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 CDK19Q9BWU1 502 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 UBE2OQ9C0C9 1292 aaKnown RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 ADARB2Q9NS39 739 aaKnown RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.57□□□□□ -2
SYNGAP1-215ENST00000636443 PTPN22Q9Y2R2 807 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 INSRP06213 1382 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 VPS8Q8N3P4 1428 aa2.57□□□□□ -2
SYNGAP1-215ENST00000636443 COL11A2P13942 1736 aaPredicted RBP2.56□□□□□ -2
SYNGAP1-215ENST00000636443 ANKRD26Q9UPS8 1709 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 BAHCC1Q9P281 2608 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 ST18O60284 1047 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 PDE6BP35913 854 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 IARSP41252 1262 aaKnown RBP2.56□□□□□ -2
SYNGAP1-215ENST00000636443 NHLH1Q02575 133 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 FKBP4Q02790 459 aaKnown RBP eCLIP2.56□□□□□ -2
SYNGAP1-215ENST00000636443 SREBF2Q12772 1141 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 ACAP1Q15027 740 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 LRIT3Q3SXY7 679 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 CFAP70Q5T0N1 1121 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 PRPF40BQ6NWY9 871 aaKnown RBP2.56□□□□□ -2
SYNGAP1-215ENST00000636443 RASAL3Q86YV0 1011 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 C7orf61Q8IZ16 206 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 CD99L2Q8TCZ2 262 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 RAPGEF4Q8WZA2 1011 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 CNKSR1Q969H4 720 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 ZNF333Q96JL9 665 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 BCL2L13Q9BXK5 485 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 EFCC1Q9HA90 598 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 TMOD3Q9NYL9 352 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 ZMYND8Q9ULU4 1186 aaPredicted RBP2.56□□□□□ -2
SYNGAP1-215ENST00000636443 CCDC61Q9Y6R9 512 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 SLX4Q8IY92 1834 aa2.56□□□□□ -2
SYNGAP1-215ENST00000636443 VCANP13611 3396 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 ZNF609O15014 1411 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 RPS6KA4O75676 772 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 FARP2O94887 1054 aaPredicted RBP2.55□□□□□ -2
SYNGAP1-215ENST00000636443 NFAT5O94916 1531 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 SERPINB2P05120 415 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 MAP2P11137 1827 aaKnown RBP2.55□□□□□ -2
SYNGAP1-215ENST00000636443 SYN1P17600 705 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 TATP17735 454 aaPredicted RBP2.55□□□□□ -2
SYNGAP1-215ENST00000636443 SCNN1DP51172 638 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 TTLL12Q14166 644 aaPredicted RBP2.55□□□□□ -2
SYNGAP1-215ENST00000636443 USPL1Q5W0Q7 1092 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 KRT26Q7Z3Y9 468 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 NUTM1Q86Y26 1132 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 CARMIL3Q8ND23 1372 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 NKX2-3Q8TAU0 364 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 SH3TC2Q8TF17 1288 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 PIGBQ92521 554 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 PCDH11XQ9BZA7 1347 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 PCDH11YQ9BZA8 1340 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 USP42Q9H9J4 1324 aaKnown RBP2.55□□□□□ -2
SYNGAP1-215ENST00000636443 THEGQ9P2T0 379 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 ARFGEF2Q9Y6D5 1785 aa2.55□□□□□ -2
SYNGAP1-215ENST00000636443 RGPD2P0DJD1 1756 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 COL5A3P25940 1745 aaPredicted RBP2.54□□□□□ -2
SYNGAP1-215ENST00000636443 ADGRB1O14514 1584 aa2.54□□□□□ -2
SYNGAP1-215ENST00000636443 CNTNAP4Q9C0A0 1308 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms