RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 PLEKHN1Q494U1 663 aaPredicted RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 CRTC2Q53ET0 693 aaPredicted RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF628Q5EBL2 1059 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 TCERG1LQ5VWI1 586 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 RUSC1-AS1Q66K80 236 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 FAM160A2Q8N612 972 aaPredicted RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 SIMC1Q8NDZ2 872 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 FLCNQ8NFG4 579 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 SCARB1Q8WTV0 552 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 IGFBPL1Q8WX77 278 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 ZCCHC14Q8WYQ9 949 aaKnown RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 GTPBP3Q969Y2 492 aaKnown RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF837Q96EG3 531 aaPredicted RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF414Q96IQ9 312 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 TMEM79Q9BSE2 394 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 RUSC1Q9BVN2 902 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 GGA1Q9UJY5 639 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 USP21Q9UK80 565 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 MMP24Q9Y5R2 645 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 IGKV6D-41A0A0C4DH26 115 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 ZNF503-AS2A6NEH8 195 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 TRIM6-TRIM34B2RNG4 842 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 KIF3CO14782 793 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 KCNAB3O43448 404 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 KRT86O43790 486 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 TBC1D12O60347 775 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 GIGYF1O75420 1035 aaPredicted RBP-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 PRNPP04156 253 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 NID1P14543 1247 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 MT3P25713 68 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 IREB2P48200 963 aaKnown RBP-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 C21orf58P58505 322 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 KRT81Q14533 505 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 RTP5Q14D33 572 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 PLCL1Q15111 1095 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 MST1LQ2TV78 715 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 SHISA2Q6UWI4 295 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 PRR23BQ6ZRT6 265 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 SH2D6Q7Z4S9 175 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 RNF135Q8IUD6 432 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 TMEM151BQ8IW70 566 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 TRIM22Q8IYM9 498 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 FBXO15Q8NCQ5 510 aaPredicted RBP-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 WFDC12Q8WWY7 111 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 ANKS1AQ92625 1134 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 ZDHHC16Q969W1 377 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 LIN37Q96GY3 246 aaPredicted RBP-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 GMCL1Q96IK5 515 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 C1QTNF3Q9BXJ4 246 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 KRTAP3-1Q9BYR8 98 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 CD248Q9HCU0 757 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 CABP2Q9NPB3 220 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 PAK6Q9NQU5 681 aaPredicted RBP-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 ZNF580Q9UK33 172 aa-0.23□□□□□ -2.45
CDKL5-210ENST00000636046 MEGF8Q7Z7M0 2845 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 ZBTB42B2RXF5 422 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 NTN3O00634 580 aaPredicted RBP-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 SPRY2O43597 315 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 PRICKLE3O43900 615 aaPredicted RBP-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 MED14OSP0DP75 135 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 PYGBP11216 843 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 ZNF37AP17032 561 aaPredicted RBP-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 GLDCP23378 1020 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 PSEN1P49768 467 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 HDGFP51858 240 aaKnown RBP-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 WNT7BP56706 349 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 SKOR1P84550 965 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 SCRN1Q12765 414 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 NFIAQ12857 509 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 NNTQ13423 1086 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 KCNMB1Q16558 191 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 XKR4Q5GH76 650 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 COLEC12Q5KU26 742 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 NPNTQ6UXI9 565 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 GSG1LQ6UXU4 331 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 Q6ZTC4 211 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 FRMD5Q7Z6J6 570 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 CADPS2Q86UW7 1296 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 Q8N9P0 234 aaPredicted RBP-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 KLF16Q9BXK1 252 aaPredicted RBP-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 MFRPQ9BY79 579 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 ZFAND3Q9H8U3 227 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 RC3H2Q9HBD1 1191 aaKnown RBP-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 SEMA3GQ9NS98 782 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 PTGFRNQ9P2B2 879 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 STOML1Q9UBI4 398 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 PRO0461Q9UI25 63 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 RAXQ9Y2V3 346 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 TESMINQ9Y4I5 508 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 LRP12Q9Y561 859 aa-0.24□□□□□ -2.45
CDKL5-210ENST00000636046 NEURL1BA8MQ27 555 aa-0.25□□□□□ -2.45
CDKL5-210ENST00000636046 C17orf51A8MQB3 221 aa-0.25□□□□□ -2.45
CDKL5-210ENST00000636046 PRSS47A8MTI9 375 aa-0.25□□□□□ -2.45
CDKL5-210ENST00000636046 ETV2O00321 342 aaPredicted RBP-0.25□□□□□ -2.45
CDKL5-210ENST00000636046 TRIM38O00635 465 aa-0.25□□□□□ -2.45
CDKL5-210ENST00000636046 SOCS7O14512 581 aa-0.25□□□□□ -2.45
CDKL5-210ENST00000636046 NR1I2O75469 434 aa-0.25□□□□□ -2.45
CDKL5-210ENST00000636046 ZFPL1O95159 310 aa-0.25□□□□□ -2.45
CDKL5-210ENST00000636046 ZIC2O95409 532 aaPredicted RBP-0.25□□□□□ -2.45
CDKL5-210ENST00000636046 NOS3P29474 1203 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms