RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 PDE6BP35913 854 aa9.7□□□□□ -0.86
CACNA1A-222ENST00000636022 RASSF7Q02833 373 aa9.7□□□□□ -0.86
CACNA1A-222ENST00000636022 RALBP1Q15311 655 aa9.7□□□□□ -0.86
CACNA1A-222ENST00000636022 NPM2Q86SE8 214 aaKnown RBP9.7□□□□□ -0.86
CACNA1A-222ENST00000636022 CCDC24Q8N4L8 307 aa9.7□□□□□ -0.86
CACNA1A-222ENST00000636022 THUMPD2Q9BTF0 503 aaKnown RBP9.7□□□□□ -0.86
CACNA1A-222ENST00000636022 RNF181Q9P0P0 153 aa9.7□□□□□ -0.86
CACNA1A-222ENST00000636022 PDZRN3Q9UPQ7 1066 aa9.7□□□□□ -0.86
CACNA1A-222ENST00000636022 NFKBIEO00221 500 aa9.69□□□□□ -0.86
CACNA1A-222ENST00000636022 TOMM70O94826 608 aa9.69□□□□□ -0.86
CACNA1A-222ENST00000636022 NEFMP07197 916 aa9.69□□□□□ -0.86
CACNA1A-222ENST00000636022 EIF4A1P60842 406 aaKnown RBP9.69□□□□□ -0.86
CACNA1A-222ENST00000636022 CNBD1Q8NA66 436 aa9.69□□□□□ -0.86
CACNA1A-222ENST00000636022 PNISRQ8TF01 805 aaKnown RBP9.69□□□□□ -0.86
CACNA1A-222ENST00000636022 PNNQ9H307 717 aaKnown RBP9.69□□□□□ -0.86
CACNA1A-222ENST00000636022 FER1L6Q2WGJ9 1857 aa9.68□□□□□ -0.86
CACNA1A-222ENST00000636022 SLX4Q8IY92 1834 aa9.68□□□□□ -0.86
CACNA1A-222ENST00000636022 ZC3H4Q9UPT8 1303 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-222ENST00000636022 SRGNP10124 158 aa9.68□□□□□ -0.86
CACNA1A-222ENST00000636022 LMNB1P20700 586 aa9.68□□□□□ -0.86
CACNA1A-222ENST00000636022 DDX10Q13206 875 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-222ENST00000636022 ZNF622Q969S3 477 aaKnown RBP eCLIP9.68□□□□□ -0.86
CACNA1A-222ENST00000636022 KDM2BQ8NHM5 1336 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 MAPK8IP3Q9UPT6 1336 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 DICER1Q9UPY3 1922 aaKnown RBP9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 KLRG2A4D1S0 409 aaPredicted RBP9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 C21orf2O43822 256 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 SLC4A2P04920 1241 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 ST5P78524 1137 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 HLFQ16534 295 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 STYK1Q6J9G0 422 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 NBPF5PQ86XG9 351 aaPredicted RBP9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 NIP7Q9Y221 180 aaKnown RBP eCLIP9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 ZNF652Q9Y2D9 606 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 NUP98P52948 1817 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 ARFGEF2Q9Y6D5 1785 aa9.67□□□□□ -0.86
CACNA1A-222ENST00000636022 CACNA1SQ13698 1873 aa9.66□□□□□ -0.86
CACNA1A-222ENST00000636022 MYBBP1AQ9BQG0 1328 aaKnown RBP9.66□□□□□ -0.86
CACNA1A-222ENST00000636022 RBM46Q8TBY0 533 aaKnown RBP9.66□□□□□ -0.86
CACNA1A-222ENST00000636022 C7orf43Q8WVR3 580 aa9.66□□□□□ -0.86
CACNA1A-222ENST00000636022 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
CACNA1A-222ENST00000636022 MASTLQ96GX5 879 aa9.66□□□□□ -0.86
CACNA1A-222ENST00000636022 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
CACNA1A-222ENST00000636022 TNRC6CQ9HCJ0 1690 aaKnown RBP9.66□□□□□ -0.86
CACNA1A-222ENST00000636022 TIAM2Q8IVF5 1701 aa9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 LTBP3Q9NS15 1303 aa9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 GLTPD2A6NH11 291 aa9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 ERVV-1B6SEH8 477 aa9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 TMPOP42166 694 aaKnown RBP9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 RIPK4P57078 832 aa9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 PRPF40BQ6NWY9 871 aaKnown RBP9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 TPTE2Q6XPS3 522 aa9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 RRAGCQ9HB90 399 aa9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 BABAM1Q9NWV8 329 aa9.65□□□□□ -0.86
CACNA1A-222ENST00000636022 ERBB4Q15303 1308 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 MAP3K15Q6ZN16 1313 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 NPHP1O15259 732 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 NPR1P16066 1061 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 APLP1P51693 650 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 PDIA6Q15084 440 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 TTLL7Q6ZT98 887 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 LRP10Q7Z4F1 713 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 NGEFQ8N5V2 710 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 TSPYL4Q9UJ04 414 aa9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-222ENST00000636022 POTECB2RU33 542 aa9.63□□□□□ -0.87
CACNA1A-222ENST00000636022 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
CACNA1A-222ENST00000636022 MYL6BP14649 208 aa9.63□□□□□ -0.87
CACNA1A-222ENST00000636022 FSTL1Q12841 308 aa9.63□□□□□ -0.87
CACNA1A-222ENST00000636022 DNAJC5GQ8N7S2 189 aa9.63□□□□□ -0.87
CACNA1A-222ENST00000636022 TAOK3Q9H2K8 898 aa9.63□□□□□ -0.87
CACNA1A-222ENST00000636022 WDR90Q96KV7 1748 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 UBN2Q6ZU65 1347 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 VEGFAP15692 232 aaPredicted RBP9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 LMOD3Q0VAK6 560 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 CRY2Q49AN0 593 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 SOGA3Q5TF21 947 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 CCDC146Q8IYE0 955 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 C16orf71Q8IYS4 520 aaPredicted RBP9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 ZNF34Q8IZ26 560 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 ZBTB3Q9H5J0 574 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 ABCC12Q96J65 1359 aa9.62□□□□□ -0.87
CACNA1A-222ENST00000636022 CHL1O00533 1208 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 PROSER3Q2NL68 480 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 OLFM4Q6UX06 510 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 GIGYF2Q6Y7W6 1299 aaKnown RBP9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 RUNDC1Q96C34 613 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 NYXQ9GZU5 481 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 PRKRIP1Q9H875 184 aaPredicted RBP9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 RIC1Q4ADV7 1423 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 SNED1Q8TER0 1413 aa9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 IBTKQ9P2D0 1353 aaPredicted RBP9.61□□□□□ -0.87
CACNA1A-222ENST00000636022 EIF2S2P20042 333 aaKnown RBP9.6□□□□□ -0.87
CACNA1A-222ENST00000636022 GPTP24298 496 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms