RNA–Protein interactions for RNA: ENST00000635852.1

LINC02009-201, Transcript of long intergenic non-protein coding RNA 2009, humanhuman

TSL 3 BASIC

Gene LINC02009, Length 2,951 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02009-201ENST00000635852 TSPYL4Q9UJ04 414 aa10.69□□□□□ -0.7
LINC02009-201ENST00000635852 ZNF215Q9UL58 517 aaPredicted RBP10.69□□□□□ -0.7
LINC02009-201ENST00000635852 ELP1O95163 1332 aa10.69□□□□□ -0.7
LINC02009-201ENST00000635852 NPM1P06748 294 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC02009-201ENST00000635852 ADCK5Q3MIX3 580 aa10.69□□□□□ -0.7
LINC02009-201ENST00000635852 VPS53Q5VIR6 699 aa10.69□□□□□ -0.7
LINC02009-201ENST00000635852 NECAB1Q8N987 351 aa10.69□□□□□ -0.7
LINC02009-201ENST00000635852 SH2B1Q9NRF2 756 aaPredicted RBP10.69□□□□□ -0.7
LINC02009-201ENST00000635852 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC02009-201ENST00000635852 V9GYY5 206 aaPredicted RBP10.69□□□□□ -0.7
LINC02009-201ENST00000635852 USP27XA6NNY8 438 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 VGLL3A8MV65 326 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 FLIIQ13045 1269 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 ME3Q16798 604 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 LARP1BQ659C4 914 aaKnown RBP10.68□□□□□ -0.7
LINC02009-201ENST00000635852 JAKMIP1Q96N16 626 aaKnown RBP10.68□□□□□ -0.7
LINC02009-201ENST00000635852 STK31Q9BXU1 1019 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 ALKQ9UM73 1620 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 SOS1Q07889 1333 aaPredicted RBP10.68□□□□□ -0.7
LINC02009-201ENST00000635852 ZNF165P49910 485 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 RBM43Q6ZSC3 357 aaKnown RBP10.68□□□□□ -0.7
LINC02009-201ENST00000635852 CNTROBQ8N137 903 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 CPS1P31327 1500 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 PREX1Q8TCU6 1659 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 TTC21AQ8NDW8 1320 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 RBM6P78332 1123 aaKnown RBP10.68□□□□□ -0.7
LINC02009-201ENST00000635852 FBXO38Q6PIJ6 1188 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 CDC37L1Q7L3B6 337 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 TIGD1Q96MW7 591 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 DNAJC25Q9H1X3 360 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 CLSTN2Q9H4D0 955 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 ZSWIM6Q9HCJ5 1215 aa10.68□□□□□ -0.7
LINC02009-201ENST00000635852 DDX19AQ9NUU7 478 aaKnown RBP10.68□□□□□ -0.7
LINC02009-201ENST00000635852 NAP1L2Q9ULW6 460 aaPredicted RBP10.68□□□□□ -0.7
LINC02009-201ENST00000635852 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 GOLGA6L4A6NEF3 574 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 PTH1RQ03431 593 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 ARID5BQ14865 1188 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 LRRC8AQ8IWT6 810 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 DDX54Q8TDD1 881 aaKnown RBP10.67□□□□□ -0.7
LINC02009-201ENST00000635852 SSH3Q8TE77 659 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 CYP46A1Q9Y6A2 500 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 ARHGEF10O15013 1369 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 MYO5BQ9ULV0 1848 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 FOXO3O43524 673 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 RAB11FIP3O75154 756 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 SURF6O75683 361 aaKnown RBP10.67□□□□□ -0.7
LINC02009-201ENST00000635852 CDK11BP21127 795 aaKnown RBP10.67□□□□□ -0.7
LINC02009-201ENST00000635852 CDC25BP30305 580 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 PTPN14Q15678 1187 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 PRPF40BQ6NWY9 871 aaKnown RBP10.67□□□□□ -0.7
LINC02009-201ENST00000635852 NYAP1Q6ZVC0 841 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 RHPN1Q8TCX5 695 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 USP44Q9H0E7 712 aa10.67□□□□□ -0.7
LINC02009-201ENST00000635852 TFIP11Q9UBB9 837 aaKnown RBP10.67□□□□□ -0.7
LINC02009-201ENST00000635852 NCKAP5LQ9HCH0 1330 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 ERICH4A6NGS2 130 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 ELF2Q15723 593 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 ERO1AQ96HE7 468 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 TM6SF1Q9BZW5 370 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 ST7Q9NRC1 585 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 TMEM131LA2VDJ0 1609 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 UBTFL1P0CB47 393 aaPredicted RBP10.66□□□□□ -0.7
LINC02009-201ENST00000635852 NECTIN2Q92692 538 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 SPATA32Q96LK8 384 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 SCAND2PQ9GZW5 306 aaPredicted RBP10.66□□□□□ -0.7
LINC02009-201ENST00000635852 TPCN1Q9ULQ1 816 aa10.66□□□□□ -0.7
LINC02009-201ENST00000635852 WASLO00401 505 aaPredicted RBP10.65□□□□□ -0.7
LINC02009-201ENST00000635852 NR1I2O75469 434 aa10.65□□□□□ -0.7
LINC02009-201ENST00000635852 PPP1R42Q7Z4L9 355 aa10.65□□□□□ -0.7
LINC02009-201ENST00000635852 NPHP3Q7Z494 1330 aa10.65□□□□□ -0.7
LINC02009-201ENST00000635852 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
LINC02009-201ENST00000635852 LEO1Q8WVC0 666 aaPredicted RBP10.65□□□□□ -0.7
LINC02009-201ENST00000635852 CALCOCO1Q9P1Z2 691 aa10.65□□□□□ -0.7
LINC02009-201ENST00000635852 ERBB3P21860 1342 aa10.65□□□□□ -0.7
LINC02009-201ENST00000635852 NEMFO60524 1076 aa10.65□□□□□ -0.71
LINC02009-201ENST00000635852 SKILP12757 684 aa10.65□□□□□ -0.71
LINC02009-201ENST00000635852 KCNB2Q92953 911 aa10.65□□□□□ -0.71
LINC02009-201ENST00000635852 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.71
LINC02009-201ENST00000635852 ZNF446Q9NWS9 450 aa10.65□□□□□ -0.71
LINC02009-201ENST00000635852 SLU7O95391 586 aaKnown RBP10.64□□□□□ -0.71
LINC02009-201ENST00000635852 FAM193AP78312 1265 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 POLA2Q14181 598 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 MTHFSDQ2M296 383 aaKnown RBP10.64□□□□□ -0.71
LINC02009-201ENST00000635852 CCDC30Q5VVM6 783 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 KIF1BPQ96EK5 621 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 TRMT1Q9NXH9 659 aaKnown RBP10.64□□□□□ -0.71
LINC02009-201ENST00000635852 PPP6R1Q9UPN7 881 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 NRKQ7Z2Y5 1582 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 DLC1Q96QB1 1528 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 PDIA4P13667 645 aaKnown RBP10.64□□□□□ -0.71
LINC02009-201ENST00000635852 PDCP20941 246 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 IQCB1Q15051 598 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 HSP90AB2PQ58FF8 381 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 SARM1Q6SZW1 724 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 PGBD1Q96JS3 809 aa10.64□□□□□ -0.71
LINC02009-201ENST00000635852 NPHP1O15259 732 aa10.63□□□□□ -0.71
LINC02009-201ENST00000635852 NECTIN1Q15223 517 aa10.63□□□□□ -0.71
LINC02009-201ENST00000635852 BICD2Q8TD16 824 aa10.63□□□□□ -0.71
LINC02009-201ENST00000635852 IPO4Q8TEX9 1081 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms