RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 PLVAPQ9BX97 442 aa11.19□□□□□ -0.62
GABRB3-217ENST00000635832 IFI16Q16666 785 aaKnown RBP11.19□□□□□ -0.62
GABRB3-217ENST00000635832 PUF60Q9UHX1 559 aaKnown RBP11.19□□□□□ -0.62
GABRB3-217ENST00000635832 TSPY2A6NKD2 308 aa11.19□□□□□ -0.62
GABRB3-217ENST00000635832 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
GABRB3-217ENST00000635832 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
GABRB3-217ENST00000635832 BOLA2Q9H3K6 86 aa11.19□□□□□ -0.62
GABRB3-217ENST00000635832 DBF4Q9UBU7 674 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-217ENST00000635832 TMCO3Q6UWJ1 677 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 PSMD1Q99460 953 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 NUP88Q99567 741 aaPredicted RBP11.18□□□□□ -0.62
GABRB3-217ENST00000635832 CRNKL1Q9BZJ0 848 aaKnown RBP11.18□□□□□ -0.62
GABRB3-217ENST00000635832 CASQ1P31415 396 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 OGFOD1Q8N543 542 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 DDX23Q9BUQ8 820 aaKnown RBP11.18□□□□□ -0.62
GABRB3-217ENST00000635832 KIAA1107Q9UPP5 1409 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 UQCRFS1P1P0C7P4 283 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 UBE4AQ14139 1066 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 KIF4BQ2VIQ3 1234 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 CNNM3Q8NE01 707 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 IKBKGQ9Y6K9 419 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 KANK3Q6NY19 840 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 CKAP2LQ8IYA6 745 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 SYNCQ9H7C4 482 aa11.18□□□□□ -0.62
GABRB3-217ENST00000635832 POLD1P28340 1107 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 DNAAF4Q8WXU2 420 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 BBXQ8WY36 941 aaPredicted RBP11.17□□□□□ -0.62
GABRB3-217ENST00000635832 IDEP14735 1019 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 MICALCLQ6ZW33 695 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 LRRC9Q6ZRR7 1453 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 ABCC11Q96J66 1382 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 RAPGEF3O95398 923 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 ZNF354CQ86Y25 554 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 RAB3IL1Q8TBN0 382 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
GABRB3-217ENST00000635832 UBA7P41226 1012 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 SPECC1Q5M775 1068 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 RGS22Q8NE09 1264 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 TBC1D5Q92609 795 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 EXOC6BQ9Y2D4 811 aa11.17□□□□□ -0.62
GABRB3-217ENST00000635832 TMCO5BA8MYB1 307 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 C6orf163Q5TEZ5 329 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 CCDC117Q8IWD4 279 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-217ENST00000635832 TTC12Q9H892 705 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-217ENST00000635832 CWC25Q9NXE8 425 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-217ENST00000635832 SMARCA4P51532 1647 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 NBPF7P0C2Y1 421 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-217ENST00000635832 TMPOP42166 694 aaKnown RBP11.16□□□□□ -0.62
GABRB3-217ENST00000635832 CCDC152Q4G0S7 254 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 SPATA24Q86W54 205 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 SLU7O95391 586 aaKnown RBP11.16□□□□□ -0.62
GABRB3-217ENST00000635832 CCDC175P0C221 793 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 NBPF1Q3BBV0 1214 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 NBPF8Q3BBV2 869 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 ALDH1L2Q3SY69 923 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 NBPF14Q5TI25 921 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 NBPF6Q5VWK0 638 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 NBPF5PQ86XG9 351 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-217ENST00000635832 NBPF4Q96M43 638 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 WDR70Q9NW82 654 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 IARSP41252 1262 aaKnown RBP11.16□□□□□ -0.62
GABRB3-217ENST00000635832 LDHAL6AQ6ZMR3 332 aa11.16□□□□□ -0.62
GABRB3-217ENST00000635832 KIF21BO75037 1637 aa11.15□□□□□ -0.62
GABRB3-217ENST00000635832 MFSD6Q6ZSS7 791 aa11.15□□□□□ -0.62
GABRB3-217ENST00000635832 PPP1R14CQ8TAE6 165 aa11.15□□□□□ -0.62
GABRB3-217ENST00000635832 GOLIM4O00461 696 aa11.15□□□□□ -0.62
GABRB3-217ENST00000635832 PHACTR2O75167 634 aa11.15□□□□□ -0.62
GABRB3-217ENST00000635832 PTPN14Q15678 1187 aa11.15□□□□□ -0.62
GABRB3-217ENST00000635832 TMEM67Q5HYA8 995 aa11.15□□□□□ -0.62
GABRB3-217ENST00000635832 TOM1O60784 492 aa11.15□□□□□ -0.63
GABRB3-217ENST00000635832 KRT13P13646 458 aa11.15□□□□□ -0.63
GABRB3-217ENST00000635832 IMPG2Q9BZV3 1241 aa11.15□□□□□ -0.63
GABRB3-217ENST00000635832 VAT1LQ9HCJ6 419 aa11.15□□□□□ -0.63
GABRB3-217ENST00000635832 RMND1Q9NWS8 449 aa11.15□□□□□ -0.63
GABRB3-217ENST00000635832 BMP15O95972 392 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 TAF12Q16514 161 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 APBB1IPQ7Z5R6 666 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-217ENST00000635832 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-217ENST00000635832 EVI5LQ96CN4 794 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 POLA1P09884 1462 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-217ENST00000635832 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
GABRB3-217ENST00000635832 GPTP24298 496 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 CCDC82Q8N4S0 544 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 GIMAP7Q8NHV1 300 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 GRPEL1Q9HAV7 217 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 TNNT1P13805 278 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 GNAQP50148 359 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 GRM1Q13255 1194 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 CADPS2Q86UW7 1296 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 NSD3Q9BZ95 1437 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 SPECC1LQ69YQ0 1117 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 KIF18AQ8NI77 898 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 NEMFO60524 1076 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 NOP2P46087 812 aaKnown RBP11.14□□□□□ -0.63
GABRB3-217ENST00000635832 CCDC183Q5T5S1 534 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 MCM10Q7L590 875 aa11.14□□□□□ -0.63
GABRB3-217ENST00000635832 IFT140Q96RY7 1462 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 GOLGA6L9A6NEM1 432 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms