RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 MAP7D1Q3KQU3 841 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 ERCC3P19447 782 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 KRT13P13646 458 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 CCT4P50991 539 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 CTCFLQ8NI51 663 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 C8orf76Q96K31 380 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 CCDC50Q8IVM0 306 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 SMC1BQ8NDV3 1235 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 FERMT1Q9BQL6 677 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 PICALMQ13492 652 aa20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 HAUS7Q99871 368 aa20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 PTGS1P23219 599 aa20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 EHMT1Q9H9B1 1298 aa20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 CGNQ9P2M7 1197 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 CCDC194A0A1B0GVG4 234 aa20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 SFPQP23246 707 aaKnown RBP eCLIP20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 RASA3Q14644 834 aa20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 GDPD2Q9HCC8 539 aa20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 C6orf163Q5TEZ5 329 aa20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 ZNF652Q9Y2D9 606 aa20.04■□□□□ 0.8
CACNA1A-215ENST00000635727 CHD1LQ86WJ1 897 aa20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 CLSTN2Q9H4D0 955 aa20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 CABP1Q9NZU7 370 aa20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 CCDC174Q6PII3 467 aa20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 ATF7IPQ6VMQ6 1270 aa20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 MRRFQ96E11 262 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 GEN1Q17RS7 908 aa20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 CALML4Q96GE6 196 aa20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 IQCGQ9H095 443 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 ZNF213O14771 459 aa20.03■□□□□ 0.8
CACNA1A-215ENST00000635727 PPP1R12AO14974 1030 aaPredicted RBP20.02■□□□□ 0.8
CACNA1A-215ENST00000635727 CSPG5O95196 566 aa20.02■□□□□ 0.8
CACNA1A-215ENST00000635727 GOLGA8BA8MQT2 603 aa20.02■□□□□ 0.8
CACNA1A-215ENST00000635727 TFIP11Q9UBB9 837 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-215ENST00000635727 TRMT112Q9UI30 125 aaKnown RBP20.02■□□□□ 0.79
CACNA1A-215ENST00000635727 BIRC2Q13490 618 aa20.02■□□□□ 0.79
CACNA1A-215ENST00000635727 EPSTI1Q96J88 318 aa20.01■□□□□ 0.79
CACNA1A-215ENST00000635727 PPP2R5DQ14738 602 aa20.01■□□□□ 0.79
CACNA1A-215ENST00000635727 SELENOSQ9BQE4 189 aa20.01■□□□□ 0.79
CACNA1A-215ENST00000635727 GOLGA8AA7E2F4 631 aa20.01■□□□□ 0.79
CACNA1A-215ENST00000635727 MCM10Q7L590 875 aa20.01■□□□□ 0.79
CACNA1A-215ENST00000635727 ZHX1Q9UKY1 873 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-215ENST00000635727 NOP9Q86U38 636 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-215ENST00000635727 GCC1Q96CN9 775 aa20.01■□□□□ 0.79
CACNA1A-215ENST00000635727 FGFR1OPO95684 399 aaKnown RBP20■□□□□ 0.79
CACNA1A-215ENST00000635727 CALM1P0DP23 149 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 CALM2P0DP24 149 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 CALM3P0DP25 149 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 AFMP43652 599 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 IQCA1Q86XH1 822 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 CETN1Q12798 172 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 SEPT14Q6ZU15 432 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 CATIPQ7Z7H3 387 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 SNRKQ9NRH2 765 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 IQSEC3Q9UPP2 1182 aaPredicted RBP20■□□□□ 0.79
CACNA1A-215ENST00000635727 YEATS4O95619 227 aa20■□□□□ 0.79
CACNA1A-215ENST00000635727 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
CACNA1A-215ENST00000635727 ALS2CR12Q96Q35 445 aa19.99■□□□□ 0.79
CACNA1A-215ENST00000635727 TSPY2A6NKD2 308 aa19.99■□□□□ 0.79
CACNA1A-215ENST00000635727 UAP1Q16222 522 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-215ENST00000635727 RPUSD2Q8IZ73 545 aaKnown RBP19.99■□□□□ 0.79
CACNA1A-215ENST00000635727 SLU7O95391 586 aaKnown RBP19.99■□□□□ 0.79
CACNA1A-215ENST00000635727 RAB34Q9BZG1 259 aa19.99■□□□□ 0.79
CACNA1A-215ENST00000635727 SMARCC1Q92922 1105 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 HYPKQ9NX55 129 aa19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 U3KPZ7 1027 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 SREK1Q8WXA9 508 aaKnown RBP19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 STX6O43752 255 aa19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 ZBTB16Q05516 673 aa19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 NGLY1Q96IV0 654 aa19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 KIAA0753Q2KHM9 967 aa19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 CCDC25Q86WR0 208 aa19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 ZSCAN12O43309 604 aa19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 TCHPQ9BT92 498 aa19.98■□□□□ 0.79
CACNA1A-215ENST00000635727 CRCPO75575 148 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 DNAJC21Q5F1R6 531 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 A0A087WZG4 1122 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 SNX16P57768 344 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 PLCB3Q01970 1234 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 CFAP70Q5T0N1 1121 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 MICALCLQ6ZW33 695 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 SLC5A1P13866 664 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 TBC1D5Q92609 795 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 ZNF408Q9H9D4 720 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 HSF2BPO75031 334 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 GABPAQ06546 454 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 PKD2L1Q9P0L9 805 aa19.97■□□□□ 0.79
CACNA1A-215ENST00000635727 MICU3Q86XE3 530 aa19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 SLC12A5Q9H2X9 1139 aa19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 VPS8Q8N3P4 1428 aa19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 SF3A3Q12874 501 aaKnown RBP eCLIP19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 FSIP1Q8NA03 581 aa19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 KIF18AQ8NI77 898 aa19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 SLC26A6Q9BXS9 759 aa19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 KAT14Q9H8E8 782 aa19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 CLGNO14967 610 aa19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 IFIT5Q13325 482 aaKnown RBP19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 SKAP1Q86WV1 359 aa19.96■□□□□ 0.79
CACNA1A-215ENST00000635727 MAP3K12Q12852 859 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms