RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 THUMPD2Q9BTF0 503 aaKnown RBP12.61□□□□□ -0.39
SMARCA2-228ENST00000634772 PCDH10Q9P2E7 1040 aa12.61□□□□□ -0.39
SMARCA2-228ENST00000634772 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
SMARCA2-228ENST00000634772 USP42Q9H9J4 1324 aaKnown RBP12.61□□□□□ -0.39
SMARCA2-228ENST00000634772 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
SMARCA2-228ENST00000634772 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
SMARCA2-228ENST00000634772 TJP1Q07157 1748 aa12.6□□□□□ -0.39
SMARCA2-228ENST00000634772 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
SMARCA2-228ENST00000634772 CHRNA5P30532 468 aa12.6□□□□□ -0.39
SMARCA2-228ENST00000634772 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
SMARCA2-228ENST00000634772 CABP4P57796 275 aa12.6□□□□□ -0.39
SMARCA2-228ENST00000634772 TAF7Q15545 349 aaPredicted RBP12.6□□□□□ -0.39
SMARCA2-228ENST00000634772 ERICH6BQ5W0A0 696 aa12.6□□□□□ -0.39
SMARCA2-228ENST00000634772 ZNF428Q96B54 188 aa12.6□□□□□ -0.39
SMARCA2-228ENST00000634772 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
SMARCA2-228ENST00000634772 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
SMARCA2-228ENST00000634772 NEFLP07196 543 aa12.59□□□□□ -0.39
SMARCA2-228ENST00000634772 PRKAR2AP13861 404 aaKnown RBP12.59□□□□□ -0.39
SMARCA2-228ENST00000634772 EXOSC9Q06265 439 aaKnown RBP12.59□□□□□ -0.39
SMARCA2-228ENST00000634772 COL13A1Q5TAT6 717 aaPredicted RBP12.59□□□□□ -0.39
SMARCA2-228ENST00000634772 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
SMARCA2-228ENST00000634772 KLRG1Q96E93 195 aa12.59□□□□□ -0.39
SMARCA2-228ENST00000634772 PIM2Q9P1W9 311 aa12.59□□□□□ -0.39
SMARCA2-228ENST00000634772 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
SMARCA2-228ENST00000634772 POLRMTO00411 1230 aaKnown RBP12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 RNMTO43148 476 aaKnown RBP12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 TM4SF1P30408 202 aa12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 PRELPP51888 382 aa12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 JMYQ8N9B5 988 aa12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 TSR2Q969E8 191 aaKnown RBP12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 RRAGCQ9HB90 399 aa12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 MBIPQ9NS73 344 aa12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 RNF181Q9P0P0 153 aa12.58□□□□□ -0.4
SMARCA2-228ENST00000634772 CEMIPQ8WUJ3 1361 aa12.57□□□□□ -0.4
SMARCA2-228ENST00000634772 VAMP4O75379 141 aa12.57□□□□□ -0.4
SMARCA2-228ENST00000634772 FSTL1Q12841 308 aa12.57□□□□□ -0.4
SMARCA2-228ENST00000634772 LGR6Q9HBX8 967 aa12.57□□□□□ -0.4
SMARCA2-228ENST00000634772 RARSP54136 660 aaKnown RBP12.56□□□□□ -0.4
SMARCA2-228ENST00000634772 RASSF7Q02833 373 aa12.56□□□□□ -0.4
SMARCA2-228ENST00000634772 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.56□□□□□ -0.4
SMARCA2-228ENST00000634772 BRPF1P55201 1214 aaPredicted RBP12.55□□□□□ -0.4
SMARCA2-228ENST00000634772 RRP1P56182 461 aaKnown RBP12.55□□□□□ -0.4
SMARCA2-228ENST00000634772 DNAJC10Q8IXB1 793 aa12.55□□□□□ -0.4
SMARCA2-228ENST00000634772 C16orf71Q8IYS4 520 aaPredicted RBP12.55□□□□□ -0.4
SMARCA2-228ENST00000634772 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
SMARCA2-228ENST00000634772 KDM2BQ8NHM5 1336 aa12.55□□□□□ -0.4
SMARCA2-228ENST00000634772 TEFQ10587 303 aa12.54□□□□□ -0.4
SMARCA2-228ENST00000634772 ALDH1L2Q3SY69 923 aa12.54□□□□□ -0.4
SMARCA2-228ENST00000634772 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
SMARCA2-228ENST00000634772 C8orf58Q8NAV2 365 aa12.54□□□□□ -0.4
SMARCA2-228ENST00000634772 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
SMARCA2-228ENST00000634772 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
SMARCA2-228ENST00000634772 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
SMARCA2-228ENST00000634772 TNRC6CQ9HCJ0 1690 aaKnown RBP12.53□□□□□ -0.4
SMARCA2-228ENST00000634772 SBF1O95248 1867 aa12.53□□□□□ -0.4
SMARCA2-228ENST00000634772 NRXN2Q9P2S2 1712 aa12.52□□□□□ -0.41
SMARCA2-228ENST00000634772 BCAR3O75815 825 aa12.52□□□□□ -0.41
SMARCA2-228ENST00000634772 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
SMARCA2-228ENST00000634772 NFIXQ14938 502 aa12.52□□□□□ -0.41
SMARCA2-228ENST00000634772 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
SMARCA2-228ENST00000634772 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.41
SMARCA2-228ENST00000634772 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.41
SMARCA2-228ENST00000634772 CARMIL3Q8ND23 1372 aa12.52□□□□□ -0.41
SMARCA2-228ENST00000634772 MRC1P22897 1456 aa12.52□□□□□ -0.41
SMARCA2-228ENST00000634772 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
SMARCA2-228ENST00000634772 PDE3AQ14432 1141 aa12.51□□□□□ -0.41
SMARCA2-228ENST00000634772 TSPYL6Q8N831 410 aa12.51□□□□□ -0.41
SMARCA2-228ENST00000634772 SMC1BQ8NDV3 1235 aa12.51□□□□□ -0.41
SMARCA2-228ENST00000634772 SSH1Q8WYL5 1049 aa12.51□□□□□ -0.41
SMARCA2-228ENST00000634772 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
SMARCA2-228ENST00000634772 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
SMARCA2-228ENST00000634772 PCNTO95613 3336 aa12.5□□□□□ -0.41
SMARCA2-228ENST00000634772 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
SMARCA2-228ENST00000634772 NFKBIEO00221 500 aa12.5□□□□□ -0.41
SMARCA2-228ENST00000634772 IPO8O15397 1037 aaKnown RBP12.5□□□□□ -0.41
SMARCA2-228ENST00000634772 MS4A1P11836 297 aa12.5□□□□□ -0.41
SMARCA2-228ENST00000634772 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
SMARCA2-228ENST00000634772 ZBTB1Q9Y2K1 713 aa12.5□□□□□ -0.41
SMARCA2-228ENST00000634772 AFDNP55196 1824 aaKnown RBP12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 COL15A1P39059 1388 aa12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 GLTPD2A6NH11 291 aa12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 POTECB2RU33 542 aa12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 ELL2O00472 640 aaPredicted RBP12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 ZPR1O75312 459 aa12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 HOXB7P09629 217 aa12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 LMNB1P20700 586 aa12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 EIF4A1P60842 406 aaKnown RBP12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 ARHGAP45Q92619 1136 aa12.49□□□□□ -0.41
SMARCA2-228ENST00000634772 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
SMARCA2-228ENST00000634772 PLIN1O60240 522 aa12.48□□□□□ -0.41
SMARCA2-228ENST00000634772 SERPINB2P05120 415 aa12.48□□□□□ -0.41
SMARCA2-228ENST00000634772 MRPL50Q8N5N7 158 aaKnown RBP12.48□□□□□ -0.41
SMARCA2-228ENST00000634772 SMC4Q9NTJ3 1288 aa12.48□□□□□ -0.41
SMARCA2-228ENST00000634772 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
SMARCA2-228ENST00000634772 ZKSCAN2Q63HK3 967 aa12.47□□□□□ -0.41
SMARCA2-228ENST00000634772 TNS4Q8IZW8 715 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms