RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 NBPF14Q5TI25 921 aa12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 MS4A3Q96HJ5 214 aa12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 DDX21Q9NR30 783 aaKnown RBP eCLIP12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 CHPF2Q9P2E5 772 aa12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 CACNA1FO60840 1977 aa12.65□□□□□ -0.38
SOX2-OT-249ENST00000628810 RPS6KA4O75676 772 aa12.65□□□□□ -0.38
SOX2-OT-249ENST00000628810 A1BGP04217 495 aa12.65□□□□□ -0.38
SOX2-OT-249ENST00000628810 EIF2S2P20042 333 aaKnown RBP12.65□□□□□ -0.38
SOX2-OT-249ENST00000628810 COL15A1P39059 1388 aa12.65□□□□□ -0.38
SOX2-OT-249ENST00000628810 SOCS7O14512 581 aa12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 GNPATO15228 680 aa12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 SSFA2P28290 1259 aa12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 NUBP1P53384 320 aa12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 RARSP54136 660 aaKnown RBP12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 AK7Q96M32 723 aa12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 STK31Q9BXU1 1019 aa12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
SOX2-OT-249ENST00000628810 SLC15A2Q16348 729 aa12.63□□□□□ -0.39
SOX2-OT-249ENST00000628810 AMIGO3Q86WK7 504 aa12.63□□□□□ -0.39
SOX2-OT-249ENST00000628810 SSH1Q8WYL5 1049 aa12.63□□□□□ -0.39
SOX2-OT-249ENST00000628810 NECTIN2Q92692 538 aa12.63□□□□□ -0.39
SOX2-OT-249ENST00000628810 HYPKQ9NX55 129 aa12.63□□□□□ -0.39
SOX2-OT-249ENST00000628810 RTCBQ9Y3I0 505 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-249ENST00000628810 RGL2O15211 777 aa12.62□□□□□ -0.39
SOX2-OT-249ENST00000628810 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-249ENST00000628810 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-249ENST00000628810 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
SOX2-OT-249ENST00000628810 STK32BQ9NY57 414 aa12.62□□□□□ -0.39
SOX2-OT-249ENST00000628810 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
SOX2-OT-249ENST00000628810 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
SOX2-OT-249ENST00000628810 A0A087WZG4 1122 aa12.61□□□□□ -0.39
SOX2-OT-249ENST00000628810 ANXA1P04083 346 aa12.61□□□□□ -0.39
SOX2-OT-249ENST00000628810 MYL6BP14649 208 aa12.61□□□□□ -0.39
SOX2-OT-249ENST00000628810 PIP4K2AP48426 406 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-249ENST00000628810 FLAD1Q8NFF5 587 aa12.61□□□□□ -0.39
SOX2-OT-249ENST00000628810 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
SOX2-OT-249ENST00000628810 N4BP2Q86UW6 1770 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-249ENST00000628810 KIF16BQ96L93 1317 aa12.61□□□□□ -0.39
SOX2-OT-249ENST00000628810 PXDNLA1KZ92 1463 aa12.6□□□□□ -0.39
SOX2-OT-249ENST00000628810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.6□□□□□ -0.39
SOX2-OT-249ENST00000628810 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
SOX2-OT-249ENST00000628810 FLIIQ13045 1269 aa12.6□□□□□ -0.39
SOX2-OT-249ENST00000628810 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
SOX2-OT-249ENST00000628810 RCAN3Q9UKA8 241 aa12.6□□□□□ -0.39
SOX2-OT-249ENST00000628810 PTPRCP08575 1304 aa12.6□□□□□ -0.39
SOX2-OT-249ENST00000628810 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
SOX2-OT-249ENST00000628810 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
SOX2-OT-249ENST00000628810 ANKRD36CQ5JPF3 1778 aa12.59□□□□□ -0.39
SOX2-OT-249ENST00000628810 TCERG1O14776 1098 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-249ENST00000628810 G2E3Q7L622 706 aa12.59□□□□□ -0.39
SOX2-OT-249ENST00000628810 XAGE3Q8WTP9 111 aa12.59□□□□□ -0.39
SOX2-OT-249ENST00000628810 BCL2L13Q9BXK5 485 aa12.59□□□□□ -0.39
SOX2-OT-249ENST00000628810 PHAXQ9H814 394 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-249ENST00000628810 ADCY9O60503 1353 aa12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 ERVV-1B6SEH8 477 aa12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 BCAR3O75815 825 aa12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 CAMTA2O94983 1202 aa12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 TRAPPC3LQ5T215 181 aa12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 DZIP3Q86Y13 1208 aaKnown RBP12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 ARHGAP45Q92619 1136 aa12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 ARHGEF1Q92888 912 aaKnown RBP12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 NARFQ9UHQ1 456 aa12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 MAP3K15Q6ZN16 1313 aa12.58□□□□□ -0.4
SOX2-OT-249ENST00000628810 ATP10DQ9P241 1426 aa12.57□□□□□ -0.4
SOX2-OT-249ENST00000628810 PHF14O94880 888 aa12.57□□□□□ -0.4
SOX2-OT-249ENST00000628810 ASTLQ6HA08 431 aaPredicted RBP12.57□□□□□ -0.4
SOX2-OT-249ENST00000628810 KIF6Q6ZMV9 814 aa12.57□□□□□ -0.4
SOX2-OT-249ENST00000628810 TTLL7Q6ZT98 887 aa12.57□□□□□ -0.4
SOX2-OT-249ENST00000628810 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
SOX2-OT-249ENST00000628810 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
SOX2-OT-249ENST00000628810 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
SOX2-OT-249ENST00000628810 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
SOX2-OT-249ENST00000628810 MAP3K13O43283 966 aa12.56□□□□□ -0.4
SOX2-OT-249ENST00000628810 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
SOX2-OT-249ENST00000628810 RFC4P35249 363 aa12.56□□□□□ -0.4
SOX2-OT-249ENST00000628810 CLEC4GQ6UXB4 293 aa12.56□□□□□ -0.4
SOX2-OT-249ENST00000628810 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
SOX2-OT-249ENST00000628810 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
SOX2-OT-249ENST00000628810 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
SOX2-OT-249ENST00000628810 NUP98P52948 1817 aa12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 FKBP5Q13451 457 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 KSR2Q6VAB6 950 aa12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 ANKRD13DQ6ZTN6 518 aa12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 NOB1Q9ULX3 412 aaKnown RBP12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 RNF123Q5XPI4 1314 aa12.55□□□□□ -0.4
SOX2-OT-249ENST00000628810 PI4KAP2A4QPH2 592 aa12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 GYS1P13807 737 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms