RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 CRKLP46109 303 aaKnown RBP10.12□□□□□ -0.79
TCF4-266ENST00000628689 RRS1Q15050 365 aaKnown RBP10.12□□□□□ -0.79
TCF4-266ENST00000628689 HDGFL2Q7Z4V5 671 aaPredicted RBP10.12□□□□□ -0.79
TCF4-266ENST00000628689 SLC12A5Q9H2X9 1139 aa10.12□□□□□ -0.79
TCF4-266ENST00000628689 FARP1Q9Y4F1 1045 aaPredicted RBP10.12□□□□□ -0.79
TCF4-266ENST00000628689 EDC4Q6P2E9 1401 aaKnown RBP10.12□□□□□ -0.79
TCF4-266ENST00000628689 ZPR1O75312 459 aa10.11□□□□□ -0.79
TCF4-266ENST00000628689 HSP90AB2PQ58FF8 381 aa10.11□□□□□ -0.79
TCF4-266ENST00000628689 CTU1Q7Z7A3 348 aaKnown RBP10.11□□□□□ -0.79
TCF4-266ENST00000628689 TMC1Q8TDI8 760 aa10.11□□□□□ -0.79
TCF4-266ENST00000628689 SPG7Q9UQ90 795 aa10.11□□□□□ -0.79
TCF4-266ENST00000628689 SLX4Q8IY92 1834 aa10.11□□□□□ -0.79
TCF4-266ENST00000628689 PITPNM2Q9BZ72 1349 aa10.1□□□□□ -0.79
TCF4-266ENST00000628689 INTS5Q6P9B9 1019 aaKnown RBP10.1□□□□□ -0.79
TCF4-266ENST00000628689 COG3Q96JB2 828 aa10.1□□□□□ -0.79
TCF4-266ENST00000628689 HHIPL1Q96JK4 782 aa10.1□□□□□ -0.79
TCF4-266ENST00000628689 INSRP06213 1382 aa10.1□□□□□ -0.79
TCF4-266ENST00000628689 PHKG2P15735 406 aa10.09□□□□□ -0.79
TCF4-266ENST00000628689 RTL1A6NKG5 1358 aa10.09□□□□□ -0.79
TCF4-266ENST00000628689 NOGQ13253 232 aa10.08□□□□□ -0.8
TCF4-266ENST00000628689 BICDL1Q6ZP65 573 aa10.08□□□□□ -0.8
TCF4-266ENST00000628689 IFNL2Q8IZJ0 200 aa10.08□□□□□ -0.8
TCF4-266ENST00000628689 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
TCF4-266ENST00000628689 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
TCF4-266ENST00000628689 COL6A3P12111 3177 aa10.08□□□□□ -0.8
TCF4-266ENST00000628689 CACNA1SQ13698 1873 aa10.08□□□□□ -0.8
TCF4-266ENST00000628689 ANKRD31Q8N7Z5 1873 aa10.08□□□□□ -0.8
TCF4-266ENST00000628689 FZD9O00144 591 aa10.07□□□□□ -0.8
TCF4-266ENST00000628689 PTCD1O75127 700 aaKnown RBP10.07□□□□□ -0.8
TCF4-266ENST00000628689 CELF2O95319 508 aaKnown RBP10.07□□□□□ -0.8
TCF4-266ENST00000628689 ZNF277Q9NRM2 450 aaPredicted RBP10.07□□□□□ -0.8
TCF4-266ENST00000628689 SAGE1Q9NXZ1 904 aa10.07□□□□□ -0.8
TCF4-266ENST00000628689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.07□□□□□ -0.8
TCF4-266ENST00000628689 NARFQ9UHQ1 456 aa10.07□□□□□ -0.8
TCF4-266ENST00000628689 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
TCF4-266ENST00000628689 A0A1W2PP64 1363 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 ERVV-2B6SEH9 535 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 TRPA1O75762 1119 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 PDE6BP35913 854 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 EPS15P42566 896 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 AKAP4Q5JQC9 854 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 PRPF40BQ6NWY9 871 aaKnown RBP10.06□□□□□ -0.8
TCF4-266ENST00000628689 GPC2Q8N158 579 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 CCDC24Q8N4L8 307 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 C7orf43Q8WVR3 580 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 CNKSR1Q969H4 720 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 BRIP1Q9BX63 1249 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 RNF186Q9NXI6 227 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 TERF2IPQ9NYB0 399 aa10.06□□□□□ -0.8
TCF4-266ENST00000628689 AKAP11Q9UKA4 1901 aa10.05□□□□□ -0.8
TCF4-266ENST00000628689 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
TCF4-266ENST00000628689 SOS1Q07889 1333 aaPredicted RBP10.05□□□□□ -0.8
TCF4-266ENST00000628689 COL11A2P13942 1736 aaPredicted RBP10.04□□□□□ -0.8
TCF4-266ENST00000628689 PKN2Q16513 984 aaKnown RBP10.04□□□□□ -0.8
TCF4-266ENST00000628689 LMOD1P29536 600 aaPredicted RBP10.03□□□□□ -0.8
TCF4-266ENST00000628689 SCNN1DP51172 638 aa10.03□□□□□ -0.8
TCF4-266ENST00000628689 NUBP1P53384 320 aa10.03□□□□□ -0.8
TCF4-266ENST00000628689 KIF23Q02241 960 aaPredicted RBP10.03□□□□□ -0.8
TCF4-266ENST00000628689 FKBP4Q02790 459 aaKnown RBP eCLIP10.03□□□□□ -0.8
TCF4-266ENST00000628689 STYK1Q6J9G0 422 aa10.03□□□□□ -0.8
TCF4-266ENST00000628689 POTEHQ6S545 545 aa10.03□□□□□ -0.8
TCF4-266ENST00000628689 USP50Q70EL3 339 aaPredicted RBP10.03□□□□□ -0.8
TCF4-266ENST00000628689 SYNE4Q8N205 404 aa10.03□□□□□ -0.8
TCF4-266ENST00000628689 GJA3Q9Y6H8 435 aa10.03□□□□□ -0.8
TCF4-266ENST00000628689 NCAPD2Q15021 1401 aa10.02□□□□□ -0.81
TCF4-266ENST00000628689 FAM155AB1AL88 458 aaPredicted RBP10.02□□□□□ -0.81
TCF4-266ENST00000628689 SRGNP10124 158 aa10.02□□□□□ -0.81
TCF4-266ENST00000628689 CCDC93Q567U6 631 aa10.02□□□□□ -0.81
TCF4-266ENST00000628689 PRR5LQ6MZQ0 368 aa10.02□□□□□ -0.81
TCF4-266ENST00000628689 GLIS2Q9BZE0 524 aaPredicted RBP10.02□□□□□ -0.81
TCF4-266ENST00000628689 ZNF408Q9H9D4 720 aa10.02□□□□□ -0.81
TCF4-266ENST00000628689 TONSLQ96HA7 1378 aa10.01□□□□□ -0.81
TCF4-266ENST00000628689 IARSP41252 1262 aaKnown RBP10.01□□□□□ -0.81
TCF4-266ENST00000628689 CABP4P57796 275 aa10.01□□□□□ -0.81
TCF4-266ENST00000628689 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
TCF4-266ENST00000628689 DNAJC10Q8IXB1 793 aa10.01□□□□□ -0.81
TCF4-266ENST00000628689 MASTLQ96GX5 879 aa10.01□□□□□ -0.81
TCF4-266ENST00000628689 TJP1Q07157 1748 aa10.01□□□□□ -0.81
TCF4-266ENST00000628689 SCN11AQ9UI33 1791 aa10.01□□□□□ -0.81
TCF4-266ENST00000628689 POTEFA5A3E0 1075 aa10□□□□□ -0.81
TCF4-266ENST00000628689 HUNKP57058 714 aa10□□□□□ -0.81
TCF4-266ENST00000628689 EYA1Q99502 592 aa10□□□□□ -0.81
TCF4-266ENST00000628689 FLT4P35916 1363 aa10□□□□□ -0.81
TCF4-266ENST00000628689 RANBP2P49792 3224 aaKnown RBP9.99□□□□□ -0.81
TCF4-266ENST00000628689 ARFGEF2Q9Y6D5 1785 aa9.99□□□□□ -0.81
TCF4-266ENST00000628689 TBC1D9BQ66K14 1250 aa9.99□□□□□ -0.81
TCF4-266ENST00000628689 RGMBQ6NW40 437 aa9.99□□□□□ -0.81
TCF4-266ENST00000628689 OTUD5Q96G74 571 aa9.99□□□□□ -0.81
TCF4-266ENST00000628689 CSRNP1Q96S65 589 aa9.99□□□□□ -0.81
TCF4-266ENST00000628689 GGNBP2Q9H3C7 697 aa9.99□□□□□ -0.81
TCF4-266ENST00000628689 HDAC9Q9UKV0 1011 aa9.99□□□□□ -0.81
TCF4-266ENST00000628689 COL15A1P39059 1388 aa9.99□□□□□ -0.81
TCF4-266ENST00000628689 FYB1O15117 783 aa9.98□□□□□ -0.81
TCF4-266ENST00000628689 CYP19A1P11511 503 aaPredicted RBP9.98□□□□□ -0.81
TCF4-266ENST00000628689 EIF6P56537 245 aaKnown RBP9.98□□□□□ -0.81
TCF4-266ENST00000628689 FBXO46Q6PJ61 603 aaPredicted RBP9.98□□□□□ -0.81
TCF4-266ENST00000628689 RTKN2Q8IZC4 609 aa9.98□□□□□ -0.81
TCF4-266ENST00000628689 PGAP2Q9UHJ9 254 aa9.98□□□□□ -0.81
TCF4-266ENST00000628689 RAB3GAP2Q9H2M9 1393 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms