RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 NMRK2Q9NPI5 230 aa21.63■■□□□ 1.05
LINC00628-201ENST00000628516 TSPYL4Q9UJ04 414 aa21.62■■□□□ 1.05
LINC00628-201ENST00000628516 NIP7Q9Y221 180 aaKnown RBP eCLIP21.62■■□□□ 1.05
LINC00628-201ENST00000628516 LAMB4A4D0S4 1761 aa21.61■■□□□ 1.05
LINC00628-201ENST00000628516 LMNB1P20700 586 aa21.61■■□□□ 1.05
LINC00628-201ENST00000628516 ZNF219Q9P2Y4 722 aaPredicted RBP21.61■■□□□ 1.05
LINC00628-201ENST00000628516 RRP7AQ9Y3A4 280 aaKnown RBP21.61■■□□□ 1.05
LINC00628-201ENST00000628516 SBF1O95248 1867 aa21.6■■□□□ 1.05
LINC00628-201ENST00000628516 RGL2O15211 777 aa21.6■■□□□ 1.05
LINC00628-201ENST00000628516 TMPOP42166 694 aaKnown RBP21.6■■□□□ 1.05
LINC00628-201ENST00000628516 HLFQ16534 295 aa21.6■■□□□ 1.05
LINC00628-201ENST00000628516 CCDC146Q8IYE0 955 aa21.6■■□□□ 1.05
LINC00628-201ENST00000628516 KDM2BQ8NHM5 1336 aa21.59■■□□□ 1.05
LINC00628-201ENST00000628516 FAM177BA6PVY3 158 aa21.59■■□□□ 1.05
LINC00628-201ENST00000628516 C21orf2O43822 256 aa21.59■■□□□ 1.05
LINC00628-201ENST00000628516 TOMM70O94826 608 aa21.59■■□□□ 1.05
LINC00628-201ENST00000628516 COL11A2P13942 1736 aaPredicted RBP21.59■■□□□ 1.05
LINC00628-201ENST00000628516 HSPA6P17066 643 aa21.59■■□□□ 1.05
LINC00628-201ENST00000628516 LMOD3Q0VAK6 560 aa21.59■■□□□ 1.05
LINC00628-201ENST00000628516 TPTE2Q6XPS3 522 aa21.59■■□□□ 1.05
LINC00628-201ENST00000628516 CNKSR1Q969H4 720 aa21.59■■□□□ 1.05
LINC00628-201ENST00000628516 NFKBIEO00221 500 aa21.58■■□□□ 1.05
LINC00628-201ENST00000628516 SRGNP10124 158 aa21.58■■□□□ 1.05
LINC00628-201ENST00000628516 MYL6BP14649 208 aa21.58■■□□□ 1.05
LINC00628-201ENST00000628516 PRELPP51888 382 aa21.58■■□□□ 1.05
LINC00628-201ENST00000628516 WDR43Q15061 677 aaKnown RBP eCLIP21.58■■□□□ 1.05
LINC00628-201ENST00000628516 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
LINC00628-201ENST00000628516 STYK1Q6J9G0 422 aa21.58■■□□□ 1.05
LINC00628-201ENST00000628516 MASTLQ96GX5 879 aa21.58■■□□□ 1.05
LINC00628-201ENST00000628516 KIF6Q6ZMV9 814 aa21.57■■□□□ 1.04
LINC00628-201ENST00000628516 ZC3H4Q9UPT8 1303 aaKnown RBP21.56■■□□□ 1.04
LINC00628-201ENST00000628516 ERVV-1B6SEH8 477 aa21.56■■□□□ 1.04
LINC00628-201ENST00000628516 IFFO2Q5TF58 517 aa21.56■■□□□ 1.04
LINC00628-201ENST00000628516 TTLL7Q6ZT98 887 aa21.56■■□□□ 1.04
LINC00628-201ENST00000628516 C16orf71Q8IYS4 520 aaPredicted RBP21.56■■□□□ 1.04
LINC00628-201ENST00000628516 MAP3K15Q6ZN16 1313 aa21.55■■□□□ 1.04
LINC00628-201ENST00000628516 GTF2E1P29083 439 aaPredicted RBP21.55■■□□□ 1.04
LINC00628-201ENST00000628516 PRPF40BQ6NWY9 871 aaKnown RBP21.55■■□□□ 1.04
LINC00628-201ENST00000628516 RRAGCQ9HB90 399 aa21.55■■□□□ 1.04
LINC00628-201ENST00000628516 BABAM1Q9NWV8 329 aa21.55■■□□□ 1.04
LINC00628-201ENST00000628516 EIF2S2P20042 333 aaKnown RBP21.54■■□□□ 1.04
LINC00628-201ENST00000628516 RUNDC1Q96C34 613 aa21.54■■□□□ 1.04
LINC00628-201ENST00000628516 PRKRIP1Q9H875 184 aaPredicted RBP21.54■■□□□ 1.04
LINC00628-201ENST00000628516 ERBB4Q15303 1308 aa21.54■■□□□ 1.04
LINC00628-201ENST00000628516 NPR1P16066 1061 aa21.53■■□□□ 1.04
LINC00628-201ENST00000628516 ZBTB3Q9H5J0 574 aa21.53■■□□□ 1.04
LINC00628-201ENST00000628516 ADAMTS8Q9UP79 889 aa21.53■■□□□ 1.04
LINC00628-201ENST00000628516 KLRG2A4D1S0 409 aaPredicted RBP21.52■■□□□ 1.04
LINC00628-201ENST00000628516 TAOK3Q9H2K8 898 aa21.52■■□□□ 1.04
LINC00628-201ENST00000628516 SLX4Q8IY92 1834 aa21.52■■□□□ 1.04
LINC00628-201ENST00000628516 GLTPD2A6NH11 291 aa21.51■■□□□ 1.03
LINC00628-201ENST00000628516 SOGA3Q5TF21 947 aa21.51■■□□□ 1.03
LINC00628-201ENST00000628516 RBM46Q8TBY0 533 aaKnown RBP21.51■■□□□ 1.03
LINC00628-201ENST00000628516 NYXQ9GZU5 481 aa21.51■■□□□ 1.03
LINC00628-201ENST00000628516 CCDC88AQ3V6T2 1871 aa21.51■■□□□ 1.03
LINC00628-201ENST00000628516 CACNA1SQ13698 1873 aa21.5■■□□□ 1.03
LINC00628-201ENST00000628516 GPTP24298 496 aa21.5■■□□□ 1.03
LINC00628-201ENST00000628516 NUTM1Q86Y26 1132 aa21.5■■□□□ 1.03
LINC00628-201ENST00000628516 LAS1LQ9Y4W2 734 aaKnown RBP21.5■■□□□ 1.03
LINC00628-201ENST00000628516 ERFEQ4G0M1 354 aa21.49■■□□□ 1.03
LINC00628-201ENST00000628516 TRIM35Q9UPQ4 493 aa21.49■■□□□ 1.03
LINC00628-201ENST00000628516 NUP98P52948 1817 aa21.49■■□□□ 1.03
LINC00628-201ENST00000628516 TNRC6CQ9HCJ0 1690 aaKnown RBP21.49■■□□□ 1.03
LINC00628-201ENST00000628516 FER1L6Q2WGJ9 1857 aa21.49■■□□□ 1.03
LINC00628-201ENST00000628516 LTBP3Q9NS15 1303 aa21.49■■□□□ 1.03
LINC00628-201ENST00000628516 ANXA1P04083 346 aa21.48■■□□□ 1.03
LINC00628-201ENST00000628516 PDIA6Q15084 440 aa21.48■■□□□ 1.03
LINC00628-201ENST00000628516 NECTIN2Q92692 538 aa21.48■■□□□ 1.03
LINC00628-201ENST00000628516 TIAM2Q8IVF5 1701 aa21.48■■□□□ 1.03
LINC00628-201ENST00000628516 ARFGEF2Q9Y6D5 1785 aa21.47■■□□□ 1.03
LINC00628-201ENST00000628516 CHL1O00533 1208 aa21.47■■□□□ 1.03
LINC00628-201ENST00000628516 APLP1P51693 650 aa21.47■■□□□ 1.03
LINC00628-201ENST00000628516 PROSER3Q2NL68 480 aa21.47■■□□□ 1.03
LINC00628-201ENST00000628516 CCDC93Q567U6 631 aa21.47■■□□□ 1.03
LINC00628-201ENST00000628516 DPY19L2Q6NUT2 758 aa21.47■■□□□ 1.03
LINC00628-201ENST00000628516 GIGYF2Q6Y7W6 1299 aaKnown RBP21.47■■□□□ 1.03
LINC00628-201ENST00000628516 C7orf43Q8WVR3 580 aa21.47■■□□□ 1.03
LINC00628-201ENST00000628516 UBN2Q6ZU65 1347 aa21.47■■□□□ 1.03
LINC00628-201ENST00000628516 ABCC12Q96J65 1359 aa21.47■■□□□ 1.03
LINC00628-201ENST00000628516 VEGFAP15692 232 aaPredicted RBP21.46■■□□□ 1.03
LINC00628-201ENST00000628516 ALDH1B1P30837 517 aa21.46■■□□□ 1.03
LINC00628-201ENST00000628516 SUSD4Q5VX71 490 aa21.46■■□□□ 1.03
LINC00628-201ENST00000628516 LRP10Q7Z4F1 713 aa21.46■■□□□ 1.03
LINC00628-201ENST00000628516 ZNF34Q8IZ26 560 aa21.46■■□□□ 1.03
LINC00628-201ENST00000628516 FSTL1Q12841 308 aa21.45■■□□□ 1.02
LINC00628-201ENST00000628516 KRT24Q2M2I5 525 aa21.44■■□□□ 1.02
LINC00628-201ENST00000628516 IBTKQ9P2D0 1353 aaPredicted RBP21.44■■□□□ 1.02
LINC00628-201ENST00000628516 AIMP1Q12904 312 aaKnown RBP21.43■■□□□ 1.02
LINC00628-201ENST00000628516 CRY2Q49AN0 593 aa21.43■■□□□ 1.02
LINC00628-201ENST00000628516 OLFM4Q6UX06 510 aa21.43■■□□□ 1.02
LINC00628-201ENST00000628516 COPS6Q7L5N1 327 aa21.43■■□□□ 1.02
LINC00628-201ENST00000628516 PPP1R42Q7Z4L9 355 aa21.43■■□□□ 1.02
LINC00628-201ENST00000628516 DICER1Q9UPY3 1922 aaKnown RBP21.43■■□□□ 1.02
LINC00628-201ENST00000628516 NTSR2O95665 410 aa21.42■■□□□ 1.02
LINC00628-201ENST00000628516 PARP10Q53GL7 1025 aa21.42■■□□□ 1.02
LINC00628-201ENST00000628516 SMC1BQ8NDV3 1235 aa21.42■■□□□ 1.02
LINC00628-201ENST00000628516 XAGE3Q8WTP9 111 aa21.42■■□□□ 1.02
LINC00628-201ENST00000628516 RPGRQ92834 1020 aaKnown RBP21.42■■□□□ 1.02
LINC00628-201ENST00000628516 FKBP4Q02790 459 aaKnown RBP eCLIP21.41■■□□□ 1.02
LINC00628-201ENST00000628516 RTKN2Q8IZC4 609 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms