RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 PRAMEF22A3QJZ6 481 aa32.05■■■□□ 2.72
CAPNS1-216ENST00000628306 SRGNP10124 158 aa32.05■■■□□ 2.72
CAPNS1-216ENST00000628306 CNGB1Q14028 1251 aaPredicted RBP32.05■■■□□ 2.72
CAPNS1-216ENST00000628306 PRKAR2BP31323 418 aa32.04■■■□□ 2.72
CAPNS1-216ENST00000628306 ERFEQ4G0M1 354 aa32.04■■■□□ 2.72
CAPNS1-216ENST00000628306 CNBD1Q8NA66 436 aa32.04■■■□□ 2.72
CAPNS1-216ENST00000628306 SETDB2Q96T68 719 aa32.04■■■□□ 2.72
CAPNS1-216ENST00000628306 BTBD11A6QL63 1104 aa32.03■■■□□ 2.72
CAPNS1-216ENST00000628306 PIP4K2AP48426 406 aaPredicted RBP32.03■■■□□ 2.72
CAPNS1-216ENST00000628306 STYK1Q6J9G0 422 aa32.03■■■□□ 2.72
CAPNS1-216ENST00000628306 CACNA1SQ13698 1873 aa32.02■■■□□ 2.72
CAPNS1-216ENST00000628306 DZIP3Q86Y13 1208 aaKnown RBP32.02■■■□□ 2.72
CAPNS1-216ENST00000628306 DPY19L2Q6NUT2 758 aa32.01■■■□□ 2.71
CAPNS1-216ENST00000628306 PRPF40BQ6NWY9 871 aaKnown RBP32.01■■■□□ 2.71
CAPNS1-216ENST00000628306 C7orf43Q8WVR3 580 aa32.01■■■□□ 2.71
CAPNS1-216ENST00000628306 TAOK3Q9H2K8 898 aa32.01■■■□□ 2.71
CAPNS1-216ENST00000628306 POTEIP0CG38 1075 aa31.99■■■□□ 2.71
CAPNS1-216ENST00000628306 POTEJP0CG39 1038 aa31.99■■■□□ 2.71
CAPNS1-216ENST00000628306 CNKSR1Q969H4 720 aa31.99■■■□□ 2.71
CAPNS1-216ENST00000628306 DDNO94850 711 aaPredicted RBP31.97■■■□□ 2.71
CAPNS1-216ENST00000628306 MASTLQ96GX5 879 aa31.97■■■□□ 2.71
CAPNS1-216ENST00000628306 HSPA1AP0DMV8 641 aaKnown RBP31.96■■■□□ 2.71
CAPNS1-216ENST00000628306 HSPA1BP0DMV9 641 aaKnown RBP31.96■■■□□ 2.71
CAPNS1-216ENST00000628306 KLRG2A4D1S0 409 aaPredicted RBP31.95■■■□□ 2.71
CAPNS1-216ENST00000628306 NBPF26B4DH59 902 aa31.95■■■□□ 2.71
CAPNS1-216ENST00000628306 ST5P78524 1137 aa31.95■■■□□ 2.71
CAPNS1-216ENST00000628306 NBPF10Q6P3W6 841 aaKnown RBP31.95■■■□□ 2.71
CAPNS1-216ENST00000628306 NBPF15Q8N660 670 aa31.95■■■□□ 2.71
CAPNS1-216ENST00000628306 CLEC4GQ6UXB4 293 aa31.94■■■□□ 2.7
CAPNS1-216ENST00000628306 MCM10Q7L590 875 aa31.94■■■□□ 2.7
CAPNS1-216ENST00000628306 CHADLQ6NUI6 762 aa31.93■■■□□ 2.7
CAPNS1-216ENST00000628306 SNRPA1P09661 255 aaKnown RBP31.92■■■□□ 2.7
CAPNS1-216ENST00000628306 TNS4Q8IZW8 715 aa31.92■■■□□ 2.7
CAPNS1-216ENST00000628306 DCTN1Q14203 1278 aa31.9■■■□□ 2.7
CAPNS1-216ENST00000628306 SOGA3Q5TF21 947 aa31.9■■■□□ 2.7
CAPNS1-216ENST00000628306 NPM2Q86SE8 214 aaKnown RBP31.9■■■□□ 2.7
CAPNS1-216ENST00000628306 NBPF5PQ86XG9 351 aaPredicted RBP31.9■■■□□ 2.7
CAPNS1-216ENST00000628306 L3MBTL3Q96JM7 780 aaPredicted RBP31.89■■■□□ 2.7
CAPNS1-216ENST00000628306 NPHP1O15259 732 aa31.88■■■□□ 2.69
CAPNS1-216ENST00000628306 OLFM4Q6UX06 510 aa31.88■■■□□ 2.69
CAPNS1-216ENST00000628306 CFAP53Q96M91 514 aa31.88■■■□□ 2.69
CAPNS1-216ENST00000628306 CREBZFQ9NS37 354 aa31.88■■■□□ 2.69
CAPNS1-216ENST00000628306 RGL2O15211 777 aa31.87■■■□□ 2.69
CAPNS1-216ENST00000628306 PPP2R1AP30153 589 aa31.87■■■□□ 2.69
CAPNS1-216ENST00000628306 MYBBP1AQ9BQG0 1328 aaKnown RBP31.86■■■□□ 2.69
CAPNS1-216ENST00000628306 NPR1P16066 1061 aa31.86■■■□□ 2.69
CAPNS1-216ENST00000628306 PASKQ96RG2 1323 aa31.85■■■□□ 2.69
CAPNS1-216ENST00000628306 SCN4AP35499 1836 aa31.85■■■□□ 2.69
CAPNS1-216ENST00000628306 U2AF1L5P0DN76 240 aaPredicted RBP31.85■■■□□ 2.69
CAPNS1-216ENST00000628306 U2AF1Q01081 240 aaKnown RBP eCLIP31.85■■■□□ 2.69
CAPNS1-216ENST00000628306 CCDC93Q567U6 631 aa31.85■■■□□ 2.69
CAPNS1-216ENST00000628306 SNED1Q8TER0 1413 aa31.85■■■□□ 2.69
CAPNS1-216ENST00000628306 CENPBP07199 599 aaPredicted RBP31.84■■■□□ 2.69
CAPNS1-216ENST00000628306 HLFQ16534 295 aa31.84■■■□□ 2.69
CAPNS1-216ENST00000628306 TAF1DQ9H5J8 278 aaPredicted RBP31.84■■■□□ 2.69
CAPNS1-216ENST00000628306 ZNF652Q9Y2D9 606 aa31.84■■■□□ 2.69
CAPNS1-216ENST00000628306 ZNF541Q9H0D2 1346 aa31.84■■■□□ 2.69
CAPNS1-216ENST00000628306 CAPN15O75808 1086 aa31.83■■■□□ 2.69
CAPNS1-216ENST00000628306 FKBP4Q02790 459 aaKnown RBP eCLIP31.83■■■□□ 2.69
CAPNS1-216ENST00000628306 NIP7Q9Y221 180 aaKnown RBP eCLIP31.83■■■□□ 2.69
CAPNS1-216ENST00000628306 NUDCQ9Y266 331 aa31.83■■■□□ 2.69
CAPNS1-216ENST00000628306 ADAMTSL1Q8N6G6 1762 aa31.82■■■□□ 2.69
CAPNS1-216ENST00000628306 RTF1Q92541 710 aaKnown RBP31.82■■■□□ 2.69
CAPNS1-216ENST00000628306 MKRN1Q9UHC7 482 aaKnown RBP31.82■■■□□ 2.69
CAPNS1-216ENST00000628306 HTATSF1O43719 755 aaKnown RBP31.81■■■□□ 2.68
CAPNS1-216ENST00000628306 TPTE2Q6XPS3 522 aa31.81■■■□□ 2.68
CAPNS1-216ENST00000628306 ZNF277Q9NRM2 450 aaPredicted RBP31.81■■■□□ 2.68
CAPNS1-216ENST00000628306 LDHDQ86WU2 507 aa31.81■■■□□ 2.68
CAPNS1-216ENST00000628306 LAMB4A4D0S4 1761 aa31.8■■■□□ 2.68
CAPNS1-216ENST00000628306 CNTNAP1P78357 1384 aa31.79■■■□□ 2.68
CAPNS1-216ENST00000628306 IQCA1LA6NCM1 817 aa31.79■■■□□ 2.68
CAPNS1-216ENST00000628306 ITGBL1O95965 494 aaPredicted RBP31.79■■■□□ 2.68
CAPNS1-216ENST00000628306 MRS2Q9HD23 443 aa31.79■■■□□ 2.68
CAPNS1-216ENST00000628306 MIS18AQ9NYP9 233 aa31.79■■■□□ 2.68
CAPNS1-216ENST00000628306 ABCC12Q96J65 1359 aa31.77■■■□□ 2.68
CAPNS1-216ENST00000628306 FAM177BA6PVY3 158 aa31.77■■■□□ 2.68
CAPNS1-216ENST00000628306 TAF7Q15545 349 aaPredicted RBP31.77■■■□□ 2.68
CAPNS1-216ENST00000628306 KDM3BQ7LBC6 1761 aa31.76■■■□□ 2.68
CAPNS1-216ENST00000628306 COL4A5P29400 1685 aa31.76■■■□□ 2.67
CAPNS1-216ENST00000628306 FZD9O00144 591 aa31.75■■■□□ 2.67
CAPNS1-216ENST00000628306 CRY2Q49AN0 593 aa31.75■■■□□ 2.67
CAPNS1-216ENST00000628306 RTKN2Q8IZC4 609 aa31.74■■■□□ 2.67
CAPNS1-216ENST00000628306 YTHDC1Q96MU7 727 aaKnown RBP31.74■■■□□ 2.67
CAPNS1-216ENST00000628306 DLG5Q8TDM6 1919 aa31.74■■■□□ 2.67
CAPNS1-216ENST00000628306 CCDC184Q52MB2 194 aa31.73■■■□□ 2.67
CAPNS1-216ENST00000628306 NUP98P52948 1817 aa31.72■■■□□ 2.67
CAPNS1-216ENST00000628306 IARSP41252 1262 aaKnown RBP31.71■■■□□ 2.67
CAPNS1-216ENST00000628306 SYNE4Q8N205 404 aa31.71■■■□□ 2.67
CAPNS1-216ENST00000628306 FOXN1O15353 648 aa31.7■■■□□ 2.67
CAPNS1-216ENST00000628306 SLC51AQ86UW1 340 aa31.7■■■□□ 2.67
CAPNS1-216ENST00000628306 HACL1Q9UJ83 578 aa31.7■■■□□ 2.67
CAPNS1-216ENST00000628306 ALDH1B1P30837 517 aa31.69■■■□□ 2.66
CAPNS1-216ENST00000628306 TTLL7Q6ZT98 887 aa31.69■■■□□ 2.66
CAPNS1-216ENST00000628306 NUTM1Q86Y26 1132 aa31.69■■■□□ 2.66
CAPNS1-216ENST00000628306 ERVV-1B6SEH8 477 aa31.68■■■□□ 2.66
CAPNS1-216ENST00000628306 EPHX2P34913 555 aa31.68■■■□□ 2.66
CAPNS1-216ENST00000628306 RNF123Q5XPI4 1314 aa31.68■■■□□ 2.66
CAPNS1-216ENST00000628306 UBN2Q6ZU65 1347 aa31.68■■■□□ 2.66
CAPNS1-216ENST00000628306 PLEKHF1Q96S99 279 aa31.68■■■□□ 2.66
CAPNS1-216ENST00000628306 PSMD1Q99460 953 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms