RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 TRIM27P14373 513 aa12.81□□□□□ -0.36
LINC01943-202ENST00000628090 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
LINC01943-202ENST00000628090 LGR6Q9HBX8 967 aa12.81□□□□□ -0.36
LINC01943-202ENST00000628090 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
LINC01943-202ENST00000628090 ADAMTS7Q9UKP4 1686 aa12.8□□□□□ -0.36
LINC01943-202ENST00000628090 SIPA1L3O60292 1781 aaPredicted RBP12.8□□□□□ -0.36
LINC01943-202ENST00000628090 GNPATO15228 680 aa12.8□□□□□ -0.36
LINC01943-202ENST00000628090 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
LINC01943-202ENST00000628090 SLC52A2Q9HAB3 445 aa12.8□□□□□ -0.36
LINC01943-202ENST00000628090 CHD4Q14839 1912 aa12.8□□□□□ -0.36
LINC01943-202ENST00000628090 CEP350Q5VT06 3117 aa12.79□□□□□ -0.36
LINC01943-202ENST00000628090 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
LINC01943-202ENST00000628090 HDGFL1Q5TGJ6 251 aa12.79□□□□□ -0.36
LINC01943-202ENST00000628090 NFATC2IPQ8NCF5 419 aa12.79□□□□□ -0.36
LINC01943-202ENST00000628090 WWC3Q9ULE0 1092 aa12.79□□□□□ -0.36
LINC01943-202ENST00000628090 PTCD1O75127 700 aaKnown RBP12.78□□□□□ -0.36
LINC01943-202ENST00000628090 SSFA2P28290 1259 aa12.78□□□□□ -0.36
LINC01943-202ENST00000628090 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
LINC01943-202ENST00000628090 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
LINC01943-202ENST00000628090 TCERG1O14776 1098 aaKnown RBP12.76□□□□□ -0.37
LINC01943-202ENST00000628090 HMGB2P26583 209 aaKnown RBP12.76□□□□□ -0.37
LINC01943-202ENST00000628090 CCT4P50991 539 aaKnown RBP12.76□□□□□ -0.37
LINC01943-202ENST00000628090 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
LINC01943-202ENST00000628090 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
LINC01943-202ENST00000628090 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
LINC01943-202ENST00000628090 DBF4Q9UBU7 674 aaPredicted RBP12.76□□□□□ -0.37
LINC01943-202ENST00000628090 ABCC4O15439 1325 aa12.75□□□□□ -0.37
LINC01943-202ENST00000628090 RLBP1P12271 317 aa12.75□□□□□ -0.37
LINC01943-202ENST00000628090 EIF2S2P20042 333 aaKnown RBP12.75□□□□□ -0.37
LINC01943-202ENST00000628090 MRC1P22897 1456 aa12.75□□□□□ -0.37
LINC01943-202ENST00000628090 FKBP5Q13451 457 aaPredicted RBP12.75□□□□□ -0.37
LINC01943-202ENST00000628090 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
LINC01943-202ENST00000628090 ZNF790Q6PG37 636 aa12.75□□□□□ -0.37
LINC01943-202ENST00000628090 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
LINC01943-202ENST00000628090 DDX58O95786 925 aaKnown RBP12.74□□□□□ -0.37
LINC01943-202ENST00000628090 MMP10P09238 476 aa12.74□□□□□ -0.37
LINC01943-202ENST00000628090 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
LINC01943-202ENST00000628090 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
LINC01943-202ENST00000628090 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
LINC01943-202ENST00000628090 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
LINC01943-202ENST00000628090 MYH14Q7Z406 1995 aaKnown RBP12.74□□□□□ -0.37
LINC01943-202ENST00000628090 RPS6KA4O75676 772 aa12.73□□□□□ -0.37
LINC01943-202ENST00000628090 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
LINC01943-202ENST00000628090 FLIIQ13045 1269 aa12.73□□□□□ -0.37
LINC01943-202ENST00000628090 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
LINC01943-202ENST00000628090 HYPKQ9NX55 129 aa12.73□□□□□ -0.37
LINC01943-202ENST00000628090 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
LINC01943-202ENST00000628090 GIGYF1O75420 1035 aaPredicted RBP12.72□□□□□ -0.37
LINC01943-202ENST00000628090 GYS1P13807 737 aa12.72□□□□□ -0.37
LINC01943-202ENST00000628090 CRKLP46109 303 aaKnown RBP12.72□□□□□ -0.37
LINC01943-202ENST00000628090 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
LINC01943-202ENST00000628090 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
LINC01943-202ENST00000628090 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
LINC01943-202ENST00000628090 SRP68Q9UHB9 627 aaKnown RBP12.72□□□□□ -0.37
LINC01943-202ENST00000628090 CNTNAP4Q9C0A0 1308 aa12.71□□□□□ -0.37
LINC01943-202ENST00000628090 INTS5Q6P9B9 1019 aaKnown RBP12.71□□□□□ -0.37
LINC01943-202ENST00000628090 SLC4A10Q6U841 1118 aa12.71□□□□□ -0.37
LINC01943-202ENST00000628090 TEX13AQ9BXU3 409 aaPredicted RBP12.71□□□□□ -0.37
LINC01943-202ENST00000628090 PXDNLA1KZ92 1463 aa12.71□□□□□ -0.38
LINC01943-202ENST00000628090 A0A0G2JLW4 131 aa12.7□□□□□ -0.38
LINC01943-202ENST00000628090 GNAI3P08754 354 aa12.7□□□□□ -0.38
LINC01943-202ENST00000628090 RFC4P35249 363 aa12.7□□□□□ -0.38
LINC01943-202ENST00000628090 C1QTNF8P60827 252 aa12.7□□□□□ -0.38
LINC01943-202ENST00000628090 MKRN4PQ13434 485 aaPredicted RBP12.7□□□□□ -0.38
LINC01943-202ENST00000628090 DNAJC10Q8IXB1 793 aa12.7□□□□□ -0.38
LINC01943-202ENST00000628090 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
LINC01943-202ENST00000628090 ZBTB40Q9NUA8 1239 aa12.7□□□□□ -0.38
LINC01943-202ENST00000628090 TNNQ9UQP3 1299 aa12.7□□□□□ -0.38
LINC01943-202ENST00000628090 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
LINC01943-202ENST00000628090 KDM2BQ8NHM5 1336 aa12.69□□□□□ -0.38
LINC01943-202ENST00000628090 COL5A3P25940 1745 aaPredicted RBP12.69□□□□□ -0.38
LINC01943-202ENST00000628090 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
LINC01943-202ENST00000628090 HMMRO75330 724 aa12.69□□□□□ -0.38
LINC01943-202ENST00000628090 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
LINC01943-202ENST00000628090 ZNF831Q5JPB2 1677 aa12.69□□□□□ -0.38
LINC01943-202ENST00000628090 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
LINC01943-202ENST00000628090 HEG1Q9ULI3 1381 aa12.69□□□□□ -0.38
LINC01943-202ENST00000628090 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
LINC01943-202ENST00000628090 KCNQ3O43525 872 aa12.68□□□□□ -0.38
LINC01943-202ENST00000628090 RPAP2Q8IXW5 612 aaPredicted RBP12.68□□□□□ -0.38
LINC01943-202ENST00000628090 DDX21Q9NR30 783 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01943-202ENST00000628090 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
LINC01943-202ENST00000628090 NEXNQ0ZGT2 675 aa12.67□□□□□ -0.38
LINC01943-202ENST00000628090 GCC1Q96CN9 775 aa12.67□□□□□ -0.38
LINC01943-202ENST00000628090 CICQ96RK0 1608 aaPredicted RBP12.66□□□□□ -0.38
LINC01943-202ENST00000628090 TJP1Q07157 1748 aa12.66□□□□□ -0.38
LINC01943-202ENST00000628090 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
LINC01943-202ENST00000628090 CYP19A1P11511 503 aaPredicted RBP12.66□□□□□ -0.38
LINC01943-202ENST00000628090 DPEP1P16444 411 aa12.66□□□□□ -0.38
LINC01943-202ENST00000628090 KCNA3P22001 575 aa12.66□□□□□ -0.38
LINC01943-202ENST00000628090 DDR1Q08345 913 aa12.66□□□□□ -0.38
LINC01943-202ENST00000628090 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
LINC01943-202ENST00000628090 ZNF526Q8TF50 670 aaPredicted RBP12.66□□□□□ -0.38
LINC01943-202ENST00000628090 ZNF496Q96IT1 587 aaPredicted RBP12.66□□□□□ -0.38
LINC01943-202ENST00000628090 SRCIN1Q9C0H9 1055 aa12.66□□□□□ -0.38
LINC01943-202ENST00000628090 UBR2Q8IWV8 1755 aa12.66□□□□□ -0.38
LINC01943-202ENST00000628090 GNAI2P04899 355 aa12.65□□□□□ -0.38
LINC01943-202ENST00000628090 KSR2Q6VAB6 950 aa12.65□□□□□ -0.38
LINC01943-202ENST00000628090 G2E3Q7L622 706 aa12.65□□□□□ -0.38
LINC01943-202ENST00000628090 VSIG10Q8N0Z9 540 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms