RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 PHKG2P15735 406 aa11.71□□□□□ -0.53
SPTAN1-212ENST00000627441 PRPF40BQ6NWY9 871 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-212ENST00000627441 HHIPL1Q96JK4 782 aa11.71□□□□□ -0.53
SPTAN1-212ENST00000627441 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
SPTAN1-212ENST00000627441 ZPR1O75312 459 aa11.7□□□□□ -0.54
SPTAN1-212ENST00000627441 TMC1Q8TDI8 760 aa11.7□□□□□ -0.54
SPTAN1-212ENST00000627441 GLIS2Q9BZE0 524 aaPredicted RBP11.7□□□□□ -0.54
SPTAN1-212ENST00000627441 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
SPTAN1-212ENST00000627441 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
SPTAN1-212ENST00000627441 FAM155AB1AL88 458 aaPredicted RBP11.69□□□□□ -0.54
SPTAN1-212ENST00000627441 FZD9O00144 591 aa11.69□□□□□ -0.54
SPTAN1-212ENST00000627441 SCNN1DP51172 638 aa11.69□□□□□ -0.54
SPTAN1-212ENST00000627441 NOGQ13253 232 aa11.69□□□□□ -0.54
SPTAN1-212ENST00000627441 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
SPTAN1-212ENST00000627441 SAGE1Q9NXZ1 904 aa11.69□□□□□ -0.54
SPTAN1-212ENST00000627441 KIAA0100Q14667 2235 aaKnown RBP11.69□□□□□ -0.54
SPTAN1-212ENST00000627441 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-212ENST00000627441 DLK2Q6UY11 383 aa11.68□□□□□ -0.54
SPTAN1-212ENST00000627441 GPC2Q8N158 579 aa11.68□□□□□ -0.54
SPTAN1-212ENST00000627441 COG3Q96JB2 828 aa11.68□□□□□ -0.54
SPTAN1-212ENST00000627441 SPG7Q9UQ90 795 aa11.68□□□□□ -0.54
SPTAN1-212ENST00000627441 GJA3Q9Y6H8 435 aa11.68□□□□□ -0.54
SPTAN1-212ENST00000627441 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
SPTAN1-212ENST00000627441 SPTBN5Q9NRC6 3674 aaKnown RBP11.67□□□□□ -0.54
SPTAN1-212ENST00000627441 COL15A1P39059 1388 aa11.67□□□□□ -0.54
SPTAN1-212ENST00000627441 VCANP13611 3396 aa11.67□□□□□ -0.54
SPTAN1-212ENST00000627441 KIF23Q02241 960 aaPredicted RBP11.67□□□□□ -0.54
SPTAN1-212ENST00000627441 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
SPTAN1-212ENST00000627441 NARFQ9UHQ1 456 aa11.67□□□□□ -0.54
SPTAN1-212ENST00000627441 LAMB4A4D0S4 1761 aa11.67□□□□□ -0.54
SPTAN1-212ENST00000627441 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
SPTAN1-212ENST00000627441 PRR5LQ6MZQ0 368 aa11.66□□□□□ -0.54
SPTAN1-212ENST00000627441 IFNL2Q8IZJ0 200 aa11.66□□□□□ -0.54
SPTAN1-212ENST00000627441 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
SPTAN1-212ENST00000627441 COL25A1Q9BXS0 654 aaPredicted RBP11.66□□□□□ -0.54
SPTAN1-212ENST00000627441 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.54
SPTAN1-212ENST00000627441 FKBP4Q02790 459 aaKnown RBP eCLIP11.65□□□□□ -0.54
SPTAN1-212ENST00000627441 MPNDQ8N594 471 aa11.65□□□□□ -0.54
SPTAN1-212ENST00000627441 LAMA3Q16787 3333 aa11.65□□□□□ -0.55
SPTAN1-212ENST00000627441 HUNKP57058 714 aa11.64□□□□□ -0.55
SPTAN1-212ENST00000627441 CCDC93Q567U6 631 aa11.64□□□□□ -0.55
SPTAN1-212ENST00000627441 DNAJC10Q8IXB1 793 aa11.64□□□□□ -0.55
SPTAN1-212ENST00000627441 BRIP1Q9BX63 1249 aa11.64□□□□□ -0.55
SPTAN1-212ENST00000627441 SRGNP10124 158 aa11.63□□□□□ -0.55
SPTAN1-212ENST00000627441 LMOD1P29536 600 aaPredicted RBP11.63□□□□□ -0.55
SPTAN1-212ENST00000627441 PDE6BP35913 854 aa11.63□□□□□ -0.55
SPTAN1-212ENST00000627441 IARSP41252 1262 aaKnown RBP11.63□□□□□ -0.55
SPTAN1-212ENST00000627441 TBC1D9BQ66K14 1250 aa11.63□□□□□ -0.55
SPTAN1-212ENST00000627441 ZBTB1Q9Y2K1 713 aa11.63□□□□□ -0.55
SPTAN1-212ENST00000627441 FLT4P35916 1363 aa11.63□□□□□ -0.55
SPTAN1-212ENST00000627441 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
SPTAN1-212ENST00000627441 KIF20BQ96Q89 1820 aa11.63□□□□□ -0.55
SPTAN1-212ENST00000627441 SNED1Q8TER0 1413 aa11.62□□□□□ -0.55
SPTAN1-212ENST00000627441 STYK1Q6J9G0 422 aa11.62□□□□□ -0.55
SPTAN1-212ENST00000627441 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
SPTAN1-212ENST00000627441 USP50Q70EL3 339 aaPredicted RBP11.62□□□□□ -0.55
SPTAN1-212ENST00000627441 SLC51AQ86UW1 340 aa11.62□□□□□ -0.55
SPTAN1-212ENST00000627441 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
SPTAN1-212ENST00000627441 CNKSR1Q969H4 720 aa11.62□□□□□ -0.55
SPTAN1-212ENST00000627441 CSRNP1Q96S65 589 aa11.62□□□□□ -0.55
SPTAN1-212ENST00000627441 ERVV-2B6SEH9 535 aa11.61□□□□□ -0.55
SPTAN1-212ENST00000627441 H0YGN5 161 aa11.61□□□□□ -0.55
SPTAN1-212ENST00000627441 PKN2Q16513 984 aaKnown RBP11.61□□□□□ -0.55
SPTAN1-212ENST00000627441 SOGA3Q5TF21 947 aa11.61□□□□□ -0.55
SPTAN1-212ENST00000627441 RGMBQ6NW40 437 aa11.61□□□□□ -0.55
SPTAN1-212ENST00000627441 FBXO46Q6PJ61 603 aaPredicted RBP11.61□□□□□ -0.55
SPTAN1-212ENST00000627441 GGNBP2Q9H3C7 697 aa11.61□□□□□ -0.55
SPTAN1-212ENST00000627441 RBM27Q9P2N5 1060 aaKnown RBP11.61□□□□□ -0.55
SPTAN1-212ENST00000627441 RAB3GAP2Q9H2M9 1393 aa11.61□□□□□ -0.55
SPTAN1-212ENST00000627441 EN2P19622 333 aaPredicted RBP11.6□□□□□ -0.55
SPTAN1-212ENST00000627441 HDAC9Q9UKV0 1011 aa11.6□□□□□ -0.55
SPTAN1-212ENST00000627441 MASTLQ96GX5 879 aa11.59□□□□□ -0.55
SPTAN1-212ENST00000627441 EYA1Q99502 592 aa11.59□□□□□ -0.55
SPTAN1-212ENST00000627441 TERF2IPQ9NYB0 399 aa11.59□□□□□ -0.55
SPTAN1-212ENST00000627441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.59□□□□□ -0.557e-8■■□□□ 11.8
SPTAN1-212ENST00000627441 PDZRN3Q9UPQ7 1066 aa11.59□□□□□ -0.55
SPTAN1-212ENST00000627441 EMILIN1Q9Y6C2 1016 aa11.59□□□□□ -0.55
SPTAN1-212ENST00000627441 TBC1D8O95759 1140 aa11.58□□□□□ -0.56
SPTAN1-212ENST00000627441 HIRAP54198 1017 aaPredicted RBP11.58□□□□□ -0.56
SPTAN1-212ENST00000627441 CABP4P57796 275 aa11.58□□□□□ -0.56
SPTAN1-212ENST00000627441 SOX1O00570 391 aaPredicted RBP11.57□□□□□ -0.56
SPTAN1-212ENST00000627441 CYP19A1P11511 503 aaPredicted RBP11.57□□□□□ -0.56
SPTAN1-212ENST00000627441 EIF6P56537 245 aaKnown RBP11.57□□□□□ -0.56
SPTAN1-212ENST00000627441 RAPGEFL1Q9UHV5 662 aa11.57□□□□□ -0.56
SPTAN1-212ENST00000627441 SHTN1A0MZ66 631 aa11.56□□□□□ -0.56
SPTAN1-212ENST00000627441 SLC10A3P09131 477 aa11.56□□□□□ -0.56
SPTAN1-212ENST00000627441 ZNF157P51786 506 aaPredicted RBP11.56□□□□□ -0.56
SPTAN1-212ENST00000627441 ADARB2Q9NS39 739 aaKnown RBP11.56□□□□□ -0.56
SPTAN1-212ENST00000627441 GPRC5DQ9NZD1 345 aa11.56□□□□□ -0.56
SPTAN1-212ENST00000627441 PGAP2Q9UHJ9 254 aa11.56□□□□□ -0.56
SPTAN1-212ENST00000627441 FYB1O15117 783 aa11.55□□□□□ -0.56
SPTAN1-212ENST00000627441 NFATC2IPQ8NCF5 419 aa11.55□□□□□ -0.56
SPTAN1-212ENST00000627441 TRPM4Q8TD43 1214 aa11.55□□□□□ -0.56
SPTAN1-212ENST00000627441 LRCH3Q96II8 777 aa11.55□□□□□ -0.56
SPTAN1-212ENST00000627441 CANXP27824 592 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-212ENST00000627441 USP48Q86UV5 1035 aa11.54□□□□□ -0.56
SPTAN1-212ENST00000627441 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
SPTAN1-212ENST00000627441 JDP2Q8WYK2 163 aa11.54□□□□□ -0.56
SPTAN1-212ENST00000627441 ROCK2O75116 1388 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-212ENST00000627441 CCDC102AQ96A19 550 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms