RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 HYPKQ9NX55 129 aa10.89□□□□□ -0.67
SGMS1-211ENST00000626236 RTCBQ9Y3I0 505 aaKnown RBP10.89□□□□□ -0.67
SGMS1-211ENST00000626236 COL15A1P39059 1388 aa10.89□□□□□ -0.67
SGMS1-211ENST00000626236 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
SGMS1-211ENST00000626236 IL6STP40189 918 aaPredicted RBP10.88□□□□□ -0.67
SGMS1-211ENST00000626236 AIMP1Q12904 312 aaKnown RBP10.88□□□□□ -0.67
SGMS1-211ENST00000626236 POTEHQ6S545 545 aa10.88□□□□□ -0.67
SGMS1-211ENST00000626236 SMIM5Q71RC9 77 aa10.88□□□□□ -0.67
SGMS1-211ENST00000626236 G2E3Q7L622 706 aa10.88□□□□□ -0.67
SGMS1-211ENST00000626236 LRP10Q7Z4F1 713 aa10.88□□□□□ -0.67
SGMS1-211ENST00000626236 XAGE3Q8WTP9 111 aa10.88□□□□□ -0.67
SGMS1-211ENST00000626236 ARXQ96QS3 562 aa10.88□□□□□ -0.67
SGMS1-211ENST00000626236 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
SGMS1-211ENST00000626236 STK32BQ9NY57 414 aa10.88□□□□□ -0.67
SGMS1-211ENST00000626236 TFCP2L1Q9NZI6 479 aa10.88□□□□□ -0.67
SGMS1-211ENST00000626236 NUP98P52948 1817 aa10.87□□□□□ -0.67
SGMS1-211ENST00000626236 RPS6KA4O75676 772 aa10.87□□□□□ -0.67
SGMS1-211ENST00000626236 EIF5P55010 431 aaKnown RBP10.87□□□□□ -0.67
SGMS1-211ENST00000626236 FLIIQ13045 1269 aa10.87□□□□□ -0.67
SGMS1-211ENST00000626236 COPS6Q7L5N1 327 aa10.87□□□□□ -0.67
SGMS1-211ENST00000626236 AMIGO3Q86WK7 504 aa10.87□□□□□ -0.67
SGMS1-211ENST00000626236 FRAT1Q92837 279 aaPredicted RBP10.87□□□□□ -0.67
SGMS1-211ENST00000626236 NOB1Q9ULX3 412 aaKnown RBP10.87□□□□□ -0.67
SGMS1-211ENST00000626236 ANKRD36CQ5JPF3 1778 aa10.87□□□□□ -0.67
SGMS1-211ENST00000626236 KIF16BQ96L93 1317 aa10.86□□□□□ -0.67
SGMS1-211ENST00000626236 AFDNP55196 1824 aaKnown RBP10.86□□□□□ -0.67
SGMS1-211ENST00000626236 N4BP2Q86UW6 1770 aaPredicted RBP10.86□□□□□ -0.67
SGMS1-211ENST00000626236 A0A087WZG4 1122 aa10.86□□□□□ -0.67
SGMS1-211ENST00000626236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.86□□□□□ -0.67
SGMS1-211ENST00000626236 SSFA2P28290 1259 aa10.86□□□□□ -0.67
SGMS1-211ENST00000626236 BRPF1P55201 1214 aaPredicted RBP10.86□□□□□ -0.67
SGMS1-211ENST00000626236 FKBP5Q13451 457 aaPredicted RBP10.86□□□□□ -0.67
SGMS1-211ENST00000626236 SLC15A2Q16348 729 aa10.86□□□□□ -0.67
SGMS1-211ENST00000626236 TRAPPC3LQ5T215 181 aa10.86□□□□□ -0.67
SGMS1-211ENST00000626236 KIF6Q6ZMV9 814 aa10.86□□□□□ -0.67
SGMS1-211ENST00000626236 TTLL7Q6ZT98 887 aa10.86□□□□□ -0.67
SGMS1-211ENST00000626236 TBC1D2BQ9UPU7 963 aa10.86□□□□□ -0.67
SGMS1-211ENST00000626236 DDX58O95786 925 aaKnown RBP10.85□□□□□ -0.67
SGMS1-211ENST00000626236 DZIP3Q86Y13 1208 aaKnown RBP10.85□□□□□ -0.67
SGMS1-211ENST00000626236 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
SGMS1-211ENST00000626236 ZBTB3Q9H5J0 574 aa10.85□□□□□ -0.67
SGMS1-211ENST00000626236 PTPRCP08575 1304 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 PNPLA7Q6ZV29 1317 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 IPO8O15397 1037 aaKnown RBP10.84□□□□□ -0.67
SGMS1-211ENST00000626236 PLIN1O60240 522 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 RFC4P35249 363 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 ZKSCAN2Q63HK3 967 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 CHRDL2Q6WN34 429 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 ANKRD13DQ6ZTN6 518 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 RIC3Q7Z5B4 369 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 ADCY9O60503 1353 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 MAP3K15Q6ZN16 1313 aa10.84□□□□□ -0.67
SGMS1-211ENST00000626236 CASZ1Q86V15 1759 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 PI4KAP2A4QPH2 592 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 F6X3S4 739 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 ZPR1O75312 459 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 RRP1P56182 461 aaKnown RBP10.83□□□□□ -0.68
SGMS1-211ENST00000626236 USPL1Q5W0Q7 1092 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 KSR2Q6VAB6 950 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 ATF7IPQ6VMQ6 1270 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 COL23A1Q86Y22 540 aaPredicted RBP10.83□□□□□ -0.68
SGMS1-211ENST00000626236 PI4KAP1Q8N8J0 262 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.83□□□□□ -0.68
SGMS1-211ENST00000626236 FLAD1Q8NFF5 587 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 PLBD2Q8NHP8 589 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 API5Q9BZZ5 524 aaKnown RBP10.83□□□□□ -0.68
SGMS1-211ENST00000626236 SRP68Q9UHB9 627 aaKnown RBP10.83□□□□□ -0.68
SGMS1-211ENST00000626236 NARFQ9UHQ1 456 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 MAP3K2Q9Y2U5 619 aa10.83□□□□□ -0.68
SGMS1-211ENST00000626236 SUPT16HQ9Y5B9 1047 aaKnown RBP10.83□□□□□ -0.68
SGMS1-211ENST00000626236 USP42Q9H9J4 1324 aaKnown RBP10.83□□□□□ -0.68
SGMS1-211ENST00000626236 SOCS7O14512 581 aa10.82□□□□□ -0.68
SGMS1-211ENST00000626236 CAMTA2O94983 1202 aa10.82□□□□□ -0.68
SGMS1-211ENST00000626236 TRIM27P14373 513 aa10.82□□□□□ -0.68
SGMS1-211ENST00000626236 HLFQ16534 295 aa10.82□□□□□ -0.68
SGMS1-211ENST00000626236 SLC4A10Q6U841 1118 aa10.82□□□□□ -0.68
SGMS1-211ENST00000626236 ARHGAP45Q92619 1136 aa10.82□□□□□ -0.68
SGMS1-211ENST00000626236 CLUAP1Q96AJ1 413 aa10.82□□□□□ -0.68
SGMS1-211ENST00000626236 TNNQ9UQP3 1299 aa10.82□□□□□ -0.68
SGMS1-211ENST00000626236 PXDNLA1KZ92 1463 aa10.81□□□□□ -0.68
SGMS1-211ENST00000626236 ERVV-1B6SEH8 477 aa10.81□□□□□ -0.68
SGMS1-211ENST00000626236 R3HDM1Q15032 1099 aaKnown RBP10.81□□□□□ -0.68
SGMS1-211ENST00000626236 FTSJ3Q8IY81 847 aaKnown RBP10.81□□□□□ -0.68
SGMS1-211ENST00000626236 DNAAF4Q8WXU2 420 aa10.81□□□□□ -0.68
SGMS1-211ENST00000626236 PSDA5PKW4 1024 aaPredicted RBP10.8□□□□□ -0.68
SGMS1-211ENST00000626236 PRR29P0C7W0 189 aa10.8□□□□□ -0.68
SGMS1-211ENST00000626236 NEXNQ0ZGT2 675 aa10.8□□□□□ -0.68
SGMS1-211ENST00000626236 GIGYF2Q6Y7W6 1299 aaKnown RBP10.8□□□□□ -0.68
SGMS1-211ENST00000626236 DZIP1LQ8IYY4 767 aaKnown RBP10.8□□□□□ -0.68
SGMS1-211ENST00000626236 MYD88Q99836 296 aa10.8□□□□□ -0.68
SGMS1-211ENST00000626236 METTL22Q9BUU2 404 aaPredicted RBP10.8□□□□□ -0.68
SGMS1-211ENST00000626236 ZNF652Q9Y2D9 606 aa10.8□□□□□ -0.68
SGMS1-211ENST00000626236 COL24A1Q17RW2 1714 aa10.8□□□□□ -0.68
SGMS1-211ENST00000626236 ABCC4O15439 1325 aa10.8□□□□□ -0.68
SGMS1-211ENST00000626236 ATP10DQ9P241 1426 aa10.79□□□□□ -0.68
SGMS1-211ENST00000626236 GYS1P13807 737 aa10.79□□□□□ -0.68
SGMS1-211ENST00000626236 HSP90AB3PQ58FF7 597 aa10.79□□□□□ -0.68
SGMS1-211ENST00000626236 C20orf194Q5TEA3 1177 aa10.79□□□□□ -0.68
SGMS1-211ENST00000626236 CLEC4GQ6UXB4 293 aa10.79□□□□□ -0.68
SGMS1-211ENST00000626236 PANK1Q8TE04 598 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms