RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ERVV-1B6SEH8 477 aa14.2□□□□□ -0.14
SSBP4-215ENST00000625926 HLFQ16534 295 aa14.2□□□□□ -0.14
SSBP4-215ENST00000625926 ERBB4Q15303 1308 aa14.19□□□□□ -0.14
SSBP4-215ENST00000625926 MYL6BP14649 208 aa14.19□□□□□ -0.14
SSBP4-215ENST00000625926 HSPA6P17066 643 aa14.19□□□□□ -0.14
SSBP4-215ENST00000625926 PRELPP51888 382 aa14.19□□□□□ -0.14
SSBP4-215ENST00000625926 KIF6Q6ZMV9 814 aa14.19□□□□□ -0.14
SSBP4-215ENST00000625926 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
SSBP4-215ENST00000625926 KIF13BQ9NQT8 1826 aa14.19□□□□□ -0.14
SSBP4-215ENST00000625926 CHL1O00533 1208 aa14.18□□□□□ -0.14
SSBP4-215ENST00000625926 EIF2S2P20042 333 aaKnown RBP14.18□□□□□ -0.14
SSBP4-215ENST00000625926 CNKSR1Q969H4 720 aa14.18□□□□□ -0.14
SSBP4-215ENST00000625926 RNF181Q9P0P0 153 aa14.18□□□□□ -0.14
SSBP4-215ENST00000625926 KIAA1551Q9HCM1 1747 aa14.18□□□□□ -0.14
SSBP4-215ENST00000625926 MAP3K15Q6ZN16 1313 aa14.17□□□□□ -0.14
SSBP4-215ENST00000625926 SRGNP10124 158 aa14.17□□□□□ -0.14
SSBP4-215ENST00000625926 GTF2E1P29083 439 aaPredicted RBP14.17□□□□□ -0.14
SSBP4-215ENST00000625926 STYK1Q6J9G0 422 aa14.17□□□□□ -0.14
SSBP4-215ENST00000625926 TTLL7Q6ZT98 887 aa14.17□□□□□ -0.14
SSBP4-215ENST00000625926 MASTLQ96GX5 879 aa14.17□□□□□ -0.14
SSBP4-215ENST00000625926 LAS1LQ9Y4W2 734 aaKnown RBP14.17□□□□□ -0.14
SSBP4-215ENST00000625926 FAM177BA6PVY3 158 aa14.16□□□□□ -0.14
SSBP4-215ENST00000625926 LMNB1P20700 586 aa14.16□□□□□ -0.14
SSBP4-215ENST00000625926 COL13A1Q5TAT6 717 aaPredicted RBP14.16□□□□□ -0.14
SSBP4-215ENST00000625926 N4BP2Q86UW6 1770 aaPredicted RBP14.15□□□□□ -0.14
SSBP4-215ENST00000625926 KLRG2A4D1S0 409 aaPredicted RBP14.15□□□□□ -0.14
SSBP4-215ENST00000625926 ZNF316A6NFI3 1004 aaPredicted RBP14.15□□□□□ -0.14
SSBP4-215ENST00000625926 KIF3CO14782 793 aa14.15□□□□□ -0.14
SSBP4-215ENST00000625926 C21orf2O43822 256 aa14.15□□□□□ -0.14
SSBP4-215ENST00000625926 RASSF7Q02833 373 aa14.15□□□□□ -0.14
SSBP4-215ENST00000625926 PDIA6Q15084 440 aa14.15□□□□□ -0.14
SSBP4-215ENST00000625926 NYXQ9GZU5 481 aa14.15□□□□□ -0.14
SSBP4-215ENST00000625926 ZBTB3Q9H5J0 574 aa14.15□□□□□ -0.14
SSBP4-215ENST00000625926 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
SSBP4-215ENST00000625926 APAF1O14727 1248 aa14.14□□□□□ -0.15
SSBP4-215ENST00000625926 NPR1P16066 1061 aa14.14□□□□□ -0.15
SSBP4-215ENST00000625926 CFAP44Q96MT7 982 aa14.14□□□□□ -0.15
SSBP4-215ENST00000625926 NRXN2Q9P2S2 1712 aa14.14□□□□□ -0.15
SSBP4-215ENST00000625926 NFKBIEO00221 500 aa14.13□□□□□ -0.15
SSBP4-215ENST00000625926 GPTP24298 496 aa14.13□□□□□ -0.15
SSBP4-215ENST00000625926 SOGA3Q5TF21 947 aa14.13□□□□□ -0.15
SSBP4-215ENST00000625926 PRPF40BQ6NWY9 871 aaKnown RBP14.13□□□□□ -0.15
SSBP4-215ENST00000625926 GIGYF2Q6Y7W6 1299 aaKnown RBP14.13□□□□□ -0.15
SSBP4-215ENST00000625926 LRP10Q7Z4F1 713 aa14.13□□□□□ -0.15
SSBP4-215ENST00000625926 ZNF34Q8IZ26 560 aa14.13□□□□□ -0.15
SSBP4-215ENST00000625926 NECTIN2Q92692 538 aa14.13□□□□□ -0.15
SSBP4-215ENST00000625926 SCN7AQ01118 1682 aa14.13□□□□□ -0.15
SSBP4-215ENST00000625926 VIRMAQ69YN4 1812 aaKnown RBP14.13□□□□□ -0.15
SSBP4-215ENST00000625926 KDM2BQ8NHM5 1336 aa14.13□□□□□ -0.15
SSBP4-215ENST00000625926 CALD1Q05682 793 aaKnown RBP14.12□□□□□ -0.15
SSBP4-215ENST00000625926 KRT24Q2M2I5 525 aa14.12□□□□□ -0.15
SSBP4-215ENST00000625926 PROSER3Q2NL68 480 aa14.12□□□□□ -0.15
SSBP4-215ENST00000625926 NMRK2Q9NPI5 230 aa14.12□□□□□ -0.15
SSBP4-215ENST00000625926 ZC3H4Q9UPT8 1303 aaKnown RBP14.12□□□□□ -0.15
SSBP4-215ENST00000625926 TOMM70O94826 608 aa14.11□□□□□ -0.15
SSBP4-215ENST00000625926 ANXA1P04083 346 aa14.11□□□□□ -0.15
SSBP4-215ENST00000625926 HOXB7P09629 217 aa14.11□□□□□ -0.15
SSBP4-215ENST00000625926 ALDH1B1P30837 517 aa14.11□□□□□ -0.15
SSBP4-215ENST00000625926 ERFEQ4G0M1 354 aa14.11□□□□□ -0.15
SSBP4-215ENST00000625926 SUSD4Q5VX71 490 aa14.11□□□□□ -0.15
SSBP4-215ENST00000625926 COPS6Q7L5N1 327 aa14.11□□□□□ -0.15
SSBP4-215ENST00000625926 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
SSBP4-215ENST00000625926 DDX21Q9NR30 783 aaKnown RBP eCLIP14.11□□□□□ -0.15
SSBP4-215ENST00000625926 UBN2Q6ZU65 1347 aa14.11□□□□□ -0.15
SSBP4-215ENST00000625926 PCNTO95613 3336 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 ANP32CO43423 234 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 ZNF853P0CG23 659 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 AIMP1Q12904 312 aaKnown RBP14.1□□□□□ -0.15
SSBP4-215ENST00000625926 PARP10Q53GL7 1025 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 HDGFL1Q5TGJ6 251 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 PPP1R42Q7Z4L9 355 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 XAGE3Q8WTP9 111 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 C7orf43Q8WVR3 580 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 TAOK3Q9H2K8 898 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 MBIPQ9NS73 344 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 LTBP3Q9NS15 1303 aa14.1□□□□□ -0.15
SSBP4-215ENST00000625926 GLTPD2A6NH11 291 aa14.09□□□□□ -0.15
SSBP4-215ENST00000625926 GNAI1P63096 354 aa14.09□□□□□ -0.15
SSBP4-215ENST00000625926 CCDC184Q52MB2 194 aa14.09□□□□□ -0.15
SSBP4-215ENST00000625926 HSP90AB3PQ58FF7 597 aa14.09□□□□□ -0.15
SSBP4-215ENST00000625926 C16orf71Q8IYS4 520 aaPredicted RBP14.09□□□□□ -0.15
SSBP4-215ENST00000625926 RRAGCQ9HB90 399 aa14.09□□□□□ -0.15
SSBP4-215ENST00000625926 IFT57Q9NWB7 429 aa14.09□□□□□ -0.15
SSBP4-215ENST00000625926 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
SSBP4-215ENST00000625926 IBTKQ9P2D0 1353 aaPredicted RBP14.09□□□□□ -0.15
SSBP4-215ENST00000625926 NTSR2O95665 410 aa14.08□□□□□ -0.16
SSBP4-215ENST00000625926 CRY2Q49AN0 593 aa14.08□□□□□ -0.16
SSBP4-215ENST00000625926 CCDC93Q567U6 631 aa14.08□□□□□ -0.16
SSBP4-215ENST00000625926 DUSP27Q5VZP5 1158 aa14.08□□□□□ -0.16
SSBP4-215ENST00000625926 DPY19L2Q6NUT2 758 aa14.08□□□□□ -0.16
SSBP4-215ENST00000625926 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.16
SSBP4-215ENST00000625926 CHPF2Q9P2E5 772 aa14.08□□□□□ -0.16
SSBP4-215ENST00000625926 DBF4Q9UBU7 674 aaPredicted RBP14.08□□□□□ -0.16
SSBP4-215ENST00000625926 AFDNP55196 1824 aaKnown RBP14.07□□□□□ -0.16
SSBP4-215ENST00000625926 TCIRG1Q13488 830 aa14.07□□□□□ -0.16
SSBP4-215ENST00000625926 TNS4Q8IZW8 715 aa14.07□□□□□ -0.16
SSBP4-215ENST00000625926 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
SSBP4-215ENST00000625926 ABCC12Q96J65 1359 aa14.07□□□□□ -0.16
SSBP4-215ENST00000625926 HOXA10P31260 410 aaPredicted RBP14.06□□□□□ -0.16
SSBP4-215ENST00000625926 SLC10A5Q5PT55 438 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms