RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.06	□□□□□ -0.8
LINC02028-223	ENST00000625668	SPHKAP	Q2M3C7	1700 aa		10.06	□□□□□ -0.8
LINC02028-223	ENST00000625668	ACIN1	Q9UKV3	1341 aa	Known RBP	10.06	□□□□□ -0.8
LINC02028-223	ENST00000625668	MED1	Q15648	1581 aa	Predicted RBP	10.05	□□□□□ -0.8
LINC02028-223	ENST00000625668	SCAF11	Q99590	1463 aa	Known RBP	10.05	□□□□□ -0.8
LINC02028-223	ENST00000625668	TMEM131L	A2VDJ0	1609 aa		10.05	□□□□□ -0.8
LINC02028-223	ENST00000625668	CLTCL1	P53675	1640 aa		10.05	□□□□□ -0.8
LINC02028-223	ENST00000625668	AP1G2	O75843	785 aa		10.05	□□□□□ -0.8
LINC02028-223	ENST00000625668	ADAMTS8	Q9UP79	889 aa		10.05	□□□□□ -0.8
LINC02028-223	ENST00000625668	TRIM26	Q12899	539 aa	Predicted RBP	10.04	□□□□□ -0.8
LINC02028-223	ENST00000625668	ANKLE2	Q86XL3	938 aa		10.04	□□□□□ -0.8
LINC02028-223	ENST00000625668	RNF217	Q8TC41	542 aa		10.04	□□□□□ -0.8
LINC02028-223	ENST00000625668	HMX1	Q9NP08	348 aa	Predicted RBP	10.04	□□□□□ -0.8
LINC02028-223	ENST00000625668	TMPRSS4	Q9NRS4	437 aa		10.04	□□□□□ -0.8
LINC02028-223	ENST00000625668	NPHP4	O75161	1426 aa	Predicted RBP	10.04	□□□□□ -0.8
LINC02028-223	ENST00000625668	MED14	O60244	1454 aa		10.04	□□□□□ -0.8
LINC02028-223	ENST00000625668	SENP3-EIF4A1	A0A087X0R7	540 aa		10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	LILRA1	O75019	489 aa		10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	ZFYVE9	O95405	1425 aa		10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	POLR1A	O95602	1720 aa	Predicted RBP	10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	SLURP2	P0DP57	97 aa		10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	ZNF385C	Q66K41	422 aa	Predicted RBP	10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	VWA5B2	Q8N398	1253 aa		10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	KDF1	Q8NAX2	398 aa	Predicted RBP	10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	SETD1B	Q9UPS6	1966 aa	Known RBP	10.03	□□□□□ -0.8
LINC02028-223	ENST00000625668	CCDC144A	A2RUR9	1427 aa		10.02	□□□□□ -0.81
LINC02028-223	ENST00000625668	RIMS2	Q9UQ26	1411 aa		10.02	□□□□□ -0.81
LINC02028-223	ENST00000625668	LOC100996750	A0A140TA64	210 aa		10.02	□□□□□ -0.81
LINC02028-223	ENST00000625668	ADH1A	P07327	375 aa		10.02	□□□□□ -0.81
LINC02028-223	ENST00000625668	LTK	P29376	864 aa		10.02	□□□□□ -0.81
LINC02028-223	ENST00000625668	ADD1	P35611	737 aa	Known RBP	10.02	□□□□□ -0.81
LINC02028-223	ENST00000625668	TXNDC2	Q86VQ3	553 aa		10.02	□□□□□ -0.81
LINC02028-223	ENST00000625668	KRTAP4-6	Q9BYQ5	205 aa		10.02	□□□□□ -0.81
LINC02028-223	ENST00000625668	POLM	Q9NP87	494 aa	Predicted RBP	10.02	□□□□□ -0.81
LINC02028-223	ENST00000625668	ESPN	B1AK53	854 aa		10.01	□□□□□ -0.81
LINC02028-223	ENST00000625668	ERVH48-1	M5A8F1	160 aa		10.01	□□□□□ -0.81
LINC02028-223	ENST00000625668	USP17L8	P0C7I0	530 aa		10.01	□□□□□ -0.81
LINC02028-223	ENST00000625668	SV2A	Q7L0J3	742 aa		10.01	□□□□□ -0.81
LINC02028-223	ENST00000625668	PNMA1	Q8ND90	353 aa		10.01	□□□□□ -0.81
LINC02028-223	ENST00000625668	EID1	Q9Y6B2	187 aa		10.01	□□□□□ -0.81
LINC02028-223	ENST00000625668	IQGAP1	P46940	1657 aa		10.01	□□□□□ -0.81
LINC02028-223	ENST00000625668	RASSF7	Q02833	373 aa		10	□□□□□ -0.81
LINC02028-223	ENST00000625668	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10	□□□□□ -0.81
LINC02028-223	ENST00000625668	KCTD17	Q8N5Z5	321 aa		10	□□□□□ -0.81
LINC02028-223	ENST00000625668	CDC14C	A4D256	554 aa		9.99	□□□□□ -0.81
LINC02028-223	ENST00000625668	PPP1R15A	O75807	674 aa	Predicted RBP	9.99	□□□□□ -0.81
LINC02028-223	ENST00000625668	PTGIR	P43119	386 aa		9.99	□□□□□ -0.81
LINC02028-223	ENST00000625668	DZIP3	Q86Y13	1208 aa	Known RBP	9.99	□□□□□ -0.81
LINC02028-223	ENST00000625668	TMEM151A	Q8N4L1	468 aa		9.99	□□□□□ -0.81
LINC02028-223	ENST00000625668	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	9.99	□□□□□ -0.81
LINC02028-223	ENST00000625668	NEXMIF	Q5QGS0	1516 aa		9.98	□□□□□ -0.81
LINC02028-223	ENST00000625668	RNF225	M0QZC1	329 aa	Predicted RBP	9.98	□□□□□ -0.81
LINC02028-223	ENST00000625668	ARHGEF15	O94989	841 aa		9.98	□□□□□ -0.81
LINC02028-223	ENST00000625668	ZNF326	Q5BKZ1	582 aa	Known RBP	9.98	□□□□□ -0.81
LINC02028-223	ENST00000625668	SVOP	Q8N4V2	548 aa		9.98	□□□□□ -0.81
LINC02028-223	ENST00000625668	WHAMM	Q8TF30	809 aa		9.98	□□□□□ -0.81
LINC02028-223	ENST00000625668	PLEKHG1	Q9ULL1	1385 aa		9.98	□□□□□ -0.81
LINC02028-223	ENST00000625668	SPATA31E1	Q6ZUB1	1445 aa		9.98	□□□□□ -0.81
LINC02028-223	ENST00000625668	CFAP65	Q6ZU64	1925 aa	Known RBP	9.97	□□□□□ -0.81
LINC02028-223	ENST00000625668	GDF11	O95390	407 aa		9.97	□□□□□ -0.81
LINC02028-223	ENST00000625668	RFC5	P40937	340 aa		9.97	□□□□□ -0.81
LINC02028-223	ENST00000625668	RAB15	P59190	212 aa		9.97	□□□□□ -0.81
LINC02028-223	ENST00000625668	ANKRD30B	Q9BXX2	1392 aa		9.97	□□□□□ -0.81
LINC02028-223	ENST00000625668	SEPT12	Q8IYM1	358 aa		9.96	□□□□□ -0.82
LINC02028-223	ENST00000625668	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	9.96	□□□□□ -0.82
LINC02028-223	ENST00000625668	TRIM34	Q9BYJ4	488 aa		9.96	□□□□□ -0.82
LINC02028-223	ENST00000625668	SUZ12	Q15022	739 aa	Known RBP	9.95	□□□□□ -0.82
LINC02028-223	ENST00000625668	BCAN	Q96GW7	911 aa		9.95	□□□□□ -0.82
LINC02028-223	ENST00000625668	SLC26A8	Q96RN1	970 aa		9.95	□□□□□ -0.82
LINC02028-223	ENST00000625668	MYO5B	Q9ULV0	1848 aa		9.95	□□□□□ -0.82
LINC02028-223	ENST00000625668	ADAMTS13	Q76LX8	1427 aa		9.94	□□□□□ -0.82
LINC02028-223	ENST00000625668	LYSMD3	Q7Z3D4	306 aa		9.94	□□□□□ -0.82
LINC02028-223	ENST00000625668	DIP2A	Q14689	1571 aa		9.93	□□□□□ -0.82
LINC02028-223	ENST00000625668	SETBP1	Q9Y6X0	1596 aa		9.93	□□□□□ -0.82
LINC02028-223	ENST00000625668	CPS1	P31327	1500 aa		9.93	□□□□□ -0.82
LINC02028-223	ENST00000625668	SRCAP	Q6ZRS2	3230 aa		9.93	□□□□□ -0.82
LINC02028-223	ENST00000625668	DHX57	Q6P158	1386 aa	Known RBP	9.93	□□□□□ -0.82
LINC02028-223	ENST00000625668	RNF144A	P50876	292 aa	Predicted RBP	9.93	□□□□□ -0.82
LINC02028-223	ENST00000625668	RGL3	Q3MIN7	710 aa		9.93	□□□□□ -0.82
LINC02028-223	ENST00000625668	CUEDC1	Q9NWM3	386 aa	Predicted RBP	9.93	□□□□□ -0.82
LINC02028-223	ENST00000625668	NRXN3	Q9Y4C0	1643 aa		9.93	□□□□□ -0.82
LINC02028-223	ENST00000625668	RPGRIP1L	Q68CZ1	1315 aa		9.92	□□□□□ -0.82
LINC02028-223	ENST00000625668	KIF1B	O60333	1816 aa		9.92	□□□□□ -0.82
LINC02028-223	ENST00000625668	GOPC	Q9HD26	462 aa		9.92	□□□□□ -0.82
LINC02028-223	ENST00000625668	CYLD	Q9NQC7	956 aa		9.92	□□□□□ -0.82
LINC02028-223	ENST00000625668	NWD1	Q149M9	1564 aa		9.92	□□□□□ -0.82
LINC02028-223	ENST00000625668	UBAP1L	F5GYI3	381 aa		9.91	□□□□□ -0.82
LINC02028-223	ENST00000625668	ADAMTS2	O95450	1211 aa		9.91	□□□□□ -0.82
LINC02028-223	ENST00000625668	SRSF11	Q05519	484 aa	Known RBP	9.91	□□□□□ -0.82
LINC02028-223	ENST00000625668	GAS6	Q14393	721 aa		9.91	□□□□□ -0.82
LINC02028-223	ENST00000625668	PCGF6	Q9BYE7	350 aa		9.91	□□□□□ -0.82
LINC02028-223	ENST00000625668	HSPA1L	P34931	641 aa		9.9	□□□□□ -0.82
LINC02028-223	ENST00000625668	TBX22	Q9Y458	520 aa		9.9	□□□□□ -0.82
LINC02028-223	ENST00000625668	LRRC7	Q96NW7	1537 aa		9.9	□□□□□ -0.82
LINC02028-223	ENST00000625668	NKTR	P30414	1462 aa	Known RBP	9.9	□□□□□ -0.83
LINC02028-223	ENST00000625668	MYOM2	P54296	1465 aa		9.9	□□□□□ -0.83
LINC02028-223	ENST00000625668	ADGRF5	Q8IZF2	1346 aa		9.89	□□□□□ -0.83
LINC02028-223	ENST00000625668	PPL	O60437	1756 aa		9.89	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms