RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 RRAGCQ9HB90 399 aa24.1■■□□□ 1.45
PCDHB5-202ENST00000623915 LAMB4A4D0S4 1761 aa24.09■■□□□ 1.45
PCDHB5-202ENST00000623915 H0YIN7 160 aa24.09■■□□□ 1.45
PCDHB5-202ENST00000623915 A1BGP04217 495 aa24.09■■□□□ 1.45
PCDHB5-202ENST00000623915 LMNB1P20700 586 aa24.09■■□□□ 1.45
PCDHB5-202ENST00000623915 CCDC27Q2M243 656 aa24.09■■□□□ 1.45
PCDHB5-202ENST00000623915 PRR5LQ6MZQ0 368 aa24.09■■□□□ 1.45
PCDHB5-202ENST00000623915 CCDC88AQ3V6T2 1871 aa24.09■■□□□ 1.45
PCDHB5-202ENST00000623915 CAMTA2O94983 1202 aa24.08■■□□□ 1.45
PCDHB5-202ENST00000623915 FSTL1Q12841 308 aa24.08■■□□□ 1.45
PCDHB5-202ENST00000623915 C16orf71Q8IYS4 520 aaPredicted RBP24.08■■□□□ 1.45
PCDHB5-202ENST00000623915 ZNF330Q9Y3S2 320 aaPredicted RBP24.08■■□□□ 1.45
PCDHB5-202ENST00000623915 APAF1O14727 1248 aa24.07■■□□□ 1.44
PCDHB5-202ENST00000623915 NGEFQ8N5V2 710 aa24.07■■□□□ 1.44
PCDHB5-202ENST00000623915 BRIP1Q9BX63 1249 aa24.07■■□□□ 1.44
PCDHB5-202ENST00000623915 HTRA3P83110 453 aa24.06■■□□□ 1.44
PCDHB5-202ENST00000623915 CCDC24Q8N4L8 307 aa24.06■■□□□ 1.44
PCDHB5-202ENST00000623915 FER1L6Q2WGJ9 1857 aa24.06■■□□□ 1.44
PCDHB5-202ENST00000623915 PRAMEF22A3QJZ6 481 aa24.04■■□□□ 1.44
PCDHB5-202ENST00000623915 GLTPD2A6NH11 291 aa24.04■■□□□ 1.44
PCDHB5-202ENST00000623915 USP16Q9Y5T5 823 aa24.04■■□□□ 1.44
PCDHB5-202ENST00000623915 CHL1O00533 1208 aa24.03■■□□□ 1.44
PCDHB5-202ENST00000623915 SNRPA1P09661 255 aaKnown RBP24.03■■□□□ 1.44
PCDHB5-202ENST00000623915 PDE6BP35913 854 aa24.03■■□□□ 1.44
PCDHB5-202ENST00000623915 PIP4K2AP48426 406 aaPredicted RBP24.03■■□□□ 1.44
PCDHB5-202ENST00000623915 THUMPD2Q9BTF0 503 aaKnown RBP24.03■■□□□ 1.44
PCDHB5-202ENST00000623915 PCNTO95613 3336 aa24.03■■□□□ 1.44
PCDHB5-202ENST00000623915 ARFGEF2Q9Y6D5 1785 aa24.02■■□□□ 1.44
PCDHB5-202ENST00000623915 EIF4A1P60842 406 aaKnown RBP24.02■■□□□ 1.44
PCDHB5-202ENST00000623915 CALD1Q05682 793 aaKnown RBP24.02■■□□□ 1.44
PCDHB5-202ENST00000623915 PDZRN3Q9UPQ7 1066 aa24.02■■□□□ 1.44
PCDHB5-202ENST00000623915 RRP7AQ9Y3A4 280 aaKnown RBP24.02■■□□□ 1.44
PCDHB5-202ENST00000623915 DICER1Q9UPY3 1922 aaKnown RBP24.02■■□□□ 1.44
PCDHB5-202ENST00000623915 SLX4Q8IY92 1834 aa24.01■■□□□ 1.43
PCDHB5-202ENST00000623915 ZNF853P0CG23 659 aa24.01■■□□□ 1.43
PCDHB5-202ENST00000623915 DZIP3Q86Y13 1208 aaKnown RBP24.01■■□□□ 1.43
PCDHB5-202ENST00000623915 CNBD1Q8NA66 436 aa24.01■■□□□ 1.43
PCDHB5-202ENST00000623915 ZNF622Q969S3 477 aaKnown RBP eCLIP24.01■■□□□ 1.43
PCDHB5-202ENST00000623915 CFAP44Q96MT7 982 aa24.01■■□□□ 1.43
PCDHB5-202ENST00000623915 C21orf2O43822 256 aa24■■□□□ 1.43
PCDHB5-202ENST00000623915 DIEXFQ68CQ4 756 aaKnown RBP24■■□□□ 1.43
PCDHB5-202ENST00000623915 SMC1BQ8NDV3 1235 aa24■■□□□ 1.43
PCDHB5-202ENST00000623915 SETDB2Q96T68 719 aa24■■□□□ 1.43
PCDHB5-202ENST00000623915 CACNA1SQ13698 1873 aa24■■□□□ 1.43
PCDHB5-202ENST00000623915 NEUROD2Q15784 382 aa23.99■■□□□ 1.43
PCDHB5-202ENST00000623915 KLRG1Q96E93 195 aa23.99■■□□□ 1.43
PCDHB5-202ENST00000623915 POTECB2RU33 542 aa23.98■■□□□ 1.43
PCDHB5-202ENST00000623915 VEGFAP15692 232 aaPredicted RBP23.98■■□□□ 1.43
PCDHB5-202ENST00000623915 ZNF219Q9P2Y4 722 aaPredicted RBP23.98■■□□□ 1.43
PCDHB5-202ENST00000623915 NBPF26B4DH59 902 aa23.97■■□□□ 1.43
PCDHB5-202ENST00000623915 SRGNP10124 158 aa23.97■■□□□ 1.43
PCDHB5-202ENST00000623915 NBPF10Q6P3W6 841 aaKnown RBP23.97■■□□□ 1.43
PCDHB5-202ENST00000623915 NBPF15Q8N660 670 aa23.97■■□□□ 1.43
PCDHB5-202ENST00000623915 JMYQ8N9B5 988 aa23.97■■□□□ 1.43
PCDHB5-202ENST00000623915 LTBP3Q9NS15 1303 aa23.97■■□□□ 1.43
PCDHB5-202ENST00000623915 IFT57Q9NWB7 429 aa23.97■■□□□ 1.43
PCDHB5-202ENST00000623915 TSPYL4Q9UJ04 414 aa23.97■■□□□ 1.43
PCDHB5-202ENST00000623915 IL16Q14005 1332 aa23.96■■□□□ 1.43
PCDHB5-202ENST00000623915 STYK1Q6J9G0 422 aa23.96■■□□□ 1.43
PCDHB5-202ENST00000623915 NPM2Q86SE8 214 aaKnown RBP23.96■■□□□ 1.43
PCDHB5-202ENST00000623915 MIS18AQ9NYP9 233 aa23.96■■□□□ 1.43
PCDHB5-202ENST00000623915 RGL2O15211 777 aa23.95■■□□□ 1.42
PCDHB5-202ENST00000623915 ST5P78524 1137 aa23.95■■□□□ 1.42
PCDHB5-202ENST00000623915 PRPF40BQ6NWY9 871 aaKnown RBP23.95■■□□□ 1.42
PCDHB5-202ENST00000623915 CLEC4GQ6UXB4 293 aa23.95■■□□□ 1.42
PCDHB5-202ENST00000623915 ERBB4Q15303 1308 aa23.94■■□□□ 1.42
PCDHB5-202ENST00000623915 HOXB7P09629 217 aa23.94■■□□□ 1.42
PCDHB5-202ENST00000623915 WWC1Q8IX03 1113 aa23.94■■□□□ 1.42
PCDHB5-202ENST00000623915 CNKSR1Q969H4 720 aa23.94■■□□□ 1.42
PCDHB5-202ENST00000623915 GNAI1P63096 354 aa23.93■■□□□ 1.42
PCDHB5-202ENST00000623915 MASTLQ96GX5 879 aa23.93■■□□□ 1.42
PCDHB5-202ENST00000623915 TAOK3Q9H2K8 898 aa23.93■■□□□ 1.42
PCDHB5-202ENST00000623915 ERFEQ4G0M1 354 aa23.92■■□□□ 1.42
PCDHB5-202ENST00000623915 NPHP1O15259 732 aa23.91■■□□□ 1.42
PCDHB5-202ENST00000623915 NBPF5PQ86XG9 351 aaPredicted RBP23.91■■□□□ 1.42
PCDHB5-202ENST00000623915 FAM9BQ8IZU0 186 aa23.91■■□□□ 1.42
PCDHB5-202ENST00000623915 C7orf43Q8WVR3 580 aa23.91■■□□□ 1.42
PCDHB5-202ENST00000623915 KLRG2A4D1S0 409 aaPredicted RBP23.9■■□□□ 1.42
PCDHB5-202ENST00000623915 WDR63Q8IWG1 891 aa23.9■■□□□ 1.42
PCDHB5-202ENST00000623915 ZNF652Q9Y2D9 606 aa23.9■■□□□ 1.42
PCDHB5-202ENST00000623915 DPY19L2Q6NUT2 758 aa23.89■■□□□ 1.41
PCDHB5-202ENST00000623915 MBIPQ9NS73 344 aa23.88■■□□□ 1.41
PCDHB5-202ENST00000623915 NIP7Q9Y221 180 aaKnown RBP eCLIP23.88■■□□□ 1.41
PCDHB5-202ENST00000623915 HLFQ16534 295 aa23.87■■□□□ 1.41
PCDHB5-202ENST00000623915 SOGA3Q5TF21 947 aa23.87■■□□□ 1.41
PCDHB5-202ENST00000623915 ZNF521Q96K83 1311 aa23.86■■□□□ 1.41
PCDHB5-202ENST00000623915 DDNO94850 711 aaPredicted RBP23.85■■□□□ 1.41
PCDHB5-202ENST00000623915 NPR1P16066 1061 aa23.85■■□□□ 1.41
PCDHB5-202ENST00000623915 CACNA1FO60840 1977 aa23.84■■□□□ 1.41
PCDHB5-202ENST00000623915 TPTE2Q6XPS3 522 aa23.84■■□□□ 1.41
PCDHB5-202ENST00000623915 ABCC12Q96J65 1359 aa23.83■■□□□ 1.41
PCDHB5-202ENST00000623915 POTEIP0CG38 1075 aa23.83■■□□□ 1.41
PCDHB5-202ENST00000623915 POTEJP0CG39 1038 aa23.83■■□□□ 1.41
PCDHB5-202ENST00000623915 CCDC93Q567U6 631 aa23.83■■□□□ 1.41
PCDHB5-202ENST00000623915 OLFM4Q6UX06 510 aa23.83■■□□□ 1.41
PCDHB5-202ENST00000623915 LRP10Q7Z4F1 713 aa23.83■■□□□ 1.41
PCDHB5-202ENST00000623915 MIER1Q8N108 512 aa23.83■■□□□ 1.41
PCDHB5-202ENST00000623915 CHMP4AQ9BY43 222 aa23.83■■□□□ 1.41
PCDHB5-202ENST00000623915 SNED1Q8TER0 1413 aa23.83■■□□□ 1.4
PCDHB5-202ENST00000623915 NUP98P52948 1817 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms