RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 EIF5P55010 431 aaKnown RBP7.25□□□□□ -1.25
CDKL5-205ENST00000623535 TNFAIP1Q13829 316 aa7.25□□□□□ -1.25
CDKL5-205ENST00000623535 DDB1Q16531 1140 aa7.25□□□□□ -1.25
CDKL5-205ENST00000623535 RBM26Q5T8P6 1007 aaKnown RBP7.25□□□□□ -1.25
CDKL5-205ENST00000623535 AEBP1Q8IUX7 1158 aa7.25□□□□□ -1.25
CDKL5-205ENST00000623535 DCPSQ96C86 337 aaKnown RBP7.25□□□□□ -1.25
CDKL5-205ENST00000623535 LRRC59Q96AG4 307 aaKnown RBP7.25□□□□□ -1.25
CDKL5-205ENST00000623535 EPRSP07814 1512 aaKnown RBP7.25□□□□□ -1.25
CDKL5-205ENST00000623535 MCM2P49736 904 aa7.25□□□□□ -1.25
CDKL5-205ENST00000623535 TTLL5Q6EMB2 1281 aa7.25□□□□□ -1.25
CDKL5-205ENST00000623535 CATIPQ7Z7H3 387 aa7.25□□□□□ -1.25
CDKL5-205ENST00000623535 TIGD1Q96MW7 591 aa7.25□□□□□ -1.25
CDKL5-205ENST00000623535 NLRP3Q96P20 1036 aa7.25□□□□□ -1.25
CDKL5-205ENST00000623535 CDK19Q9BWU1 502 aa7.25□□□□□ -1.25
CDKL5-205ENST00000623535 PLCB4Q15147 1175 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 NIM1KQ8IY84 436 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 RTEL1-TNFRSF6BF6WH68 1400 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 SKIDA1Q1XH10 827 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 MKRN1Q9UHC7 482 aaKnown RBP7.24□□□□□ -1.25
CDKL5-205ENST00000623535 CCDC194A0A1B0GVG4 234 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 DKC1O60832 514 aaKnown RBP eCLIP7.24□□□□□ -1.25
CDKL5-205ENST00000623535 FAM8A1Q9UBU6 413 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 GNAI2P04899 355 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 C6orf50Q9HD87 102 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 IRX3P78415 501 aaPredicted RBP7.24□□□□□ -1.25
CDKL5-205ENST00000623535 CCDC125Q86Z20 511 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 CALML3P27482 149 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 STK11IPQ8N1F8 1099 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 SMTNL1A8MU46 457 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 GCNAQ96QF7 691 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 LMCD1Q9NZU5 365 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 TNIKQ9UKE5 1360 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 APOBRQ0VD83 1088 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 KIF4BQ2VIQ3 1234 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 SLC8A2Q9UPR5 921 aa7.24□□□□□ -1.25
CDKL5-205ENST00000623535 H0YIN7 160 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 CCT6BQ92526 530 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 SHTN1A0MZ66 631 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 ZC3H6P61129 1189 aaKnown RBP7.23□□□□□ -1.25
CDKL5-205ENST00000623535 SMC1BQ8NDV3 1235 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 SIRT1Q96EB6 747 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 RBM17Q96I25 401 aaKnown RBP7.23□□□□□ -1.25
CDKL5-205ENST00000623535 MYD88Q99836 296 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 DDX49Q9Y6V7 483 aaKnown RBP7.23□□□□□ -1.25
CDKL5-205ENST00000623535 NPHP3Q7Z494 1330 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 DAPK1P53355 1430 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 HOXD10P28358 340 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 GABPAQ06546 454 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 FAM114A1Q8IWE2 563 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 PPP1R14CQ8TAE6 165 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 RUNDC1Q96C34 613 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 CRNKL1Q9BZJ0 848 aaKnown RBP7.23□□□□□ -1.25
CDKL5-205ENST00000623535 U3KPZ7 1027 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-205ENST00000623535 KRT10P13645 584 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 IRAK4Q9NWZ3 460 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 RSPH3Q86UC2 560 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 LBHD1Q9BQE6 289 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-205ENST00000623535 ANKRD30BQ9BXX2 1392 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 HMOX1P09601 288 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 CACNA2D4Q7Z3S7 1137 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 TBC1D5Q92609 795 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 MBIPQ9NS73 344 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 RAPGEF2Q9Y4G8 1499 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 NFKBIAP25963 317 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 ABI1Q8IZP0 508 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 CCDC94Q9BW85 323 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-205ENST00000623535 TEX14Q8IWB6 1497 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 SYCE3A1L190 88 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 GIPC1O14908 333 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 ARID4AP29374 1257 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-205ENST00000623535 SPA17Q15506 151 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 TPTE2Q6XPS3 522 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 DYDC1Q8WWB3 177 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-205ENST00000623535 PNMA2Q9UL42 364 aa7.23□□□□□ -1.25
CDKL5-205ENST00000623535 SULF1Q8IWU6 871 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 MAST3O60307 1309 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 MINDY4BA8MYZ0 360 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 KIAA0754O94854 1291 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 TCP11L1Q9NUJ3 509 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 AKNAQ7Z591 1439 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 KIF11P52732 1056 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 SERPINC1P01008 464 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 FOXD4L6Q3SYB3 417 aaPredicted RBP7.22□□□□□ -1.25
CDKL5-205ENST00000623535 FOXD4L3Q6VB84 417 aaPredicted RBP7.22□□□□□ -1.25
CDKL5-205ENST00000623535 CCDC88BA6NC98 1476 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 KDM4AO75164 1064 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 KAT14Q9H8E8 782 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 KRT13P13646 458 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 MAP7D1Q3KQU3 841 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 MCM10Q7L590 875 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 DCAF1Q9Y4B6 1507 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 ESYT2A0FGR8 921 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 RANBP6O60518 1105 aaKnown RBP7.22□□□□□ -1.25
CDKL5-205ENST00000623535 DNM2P50570 870 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 NOLC1Q14978 699 aaKnown RBP eCLIP7.22□□□□□ -1.25
CDKL5-205ENST00000623535 KIAA1328Q86T90 577 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 TBC1D31Q96DN5 1066 aa7.22□□□□□ -1.25
CDKL5-205ENST00000623535 CERS3Q8IU89 383 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms