RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 MAP4K4O95819 1239 aaPredicted RBP11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 ANXA1P04083 346 aa11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 PRIM1P49642 420 aaKnown RBP11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 ZSCAN30Q86W11 494 aa11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 GPATCH3Q96I76 525 aa11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 SNRKQ9NRH2 765 aa11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 RPAP1Q9BWH6 1393 aaPredicted RBP11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 MRC1P22897 1456 aa11.61□□□□□ -0.55
IGHV3-54-201ENST00000622166 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 OS9Q13438 667 aaPredicted RBP11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 SYAP1Q96A49 352 aaPredicted RBP11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 ORAI2Q96SN7 254 aa11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 C9orf78Q9NZ63 289 aaPredicted RBP11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 NSFL1CQ9UNZ2 370 aaKnown RBP11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 LIMCH1Q9UPQ0 1083 aa11.6□□□□□ -0.55
IGHV3-54-201ENST00000622166 C5P01031 1676 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 GRM8O00222 908 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 HIP1O00291 1037 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 AK2P54819 239 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 PDIA6Q15084 440 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 RUFY3Q7L099 469 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 KRT28Q7Z3Y7 464 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 SUCLG2Q96I99 432 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 CHAMP1Q96JM3 812 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 ZSCAN31Q96LW9 406 aaPredicted RBP11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 DIAPH3Q9NSV4 1193 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 COL18A1P39060 1754 aa11.59□□□□□ -0.55
IGHV3-54-201ENST00000622166 IFIT2P09913 472 aaKnown RBP11.58□□□□□ -0.56
IGHV3-54-201ENST00000622166 ZSCAN22P10073 491 aaPredicted RBP11.58□□□□□ -0.56
IGHV3-54-201ENST00000622166 VPS53Q5VIR6 699 aa11.58□□□□□ -0.56
IGHV3-54-201ENST00000622166 FOXD4L5Q5VV16 416 aaPredicted RBP11.58□□□□□ -0.56
IGHV3-54-201ENST00000622166 NOL8Q76FK4 1167 aaKnown RBP11.58□□□□□ -0.56
IGHV3-54-201ENST00000622166 FOXD4L4Q8WXT5 416 aaPredicted RBP11.58□□□□□ -0.56
IGHV3-54-201ENST00000622166 KAZALD1Q96I82 304 aa11.58□□□□□ -0.56
IGHV3-54-201ENST00000622166 ZSWIM6Q9HCJ5 1215 aa11.58□□□□□ -0.56
IGHV3-54-201ENST00000622166 SH2B1Q9NRF2 756 aaPredicted RBP11.58□□□□□ -0.56
IGHV3-54-201ENST00000622166 C1orf167Q5SNV9 1468 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 COL15A1P39059 1388 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 SYCE3A1L190 88 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 SASH1O94885 1247 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 PTH1RQ03431 593 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 G3BP1Q13283 466 aaKnown RBP eCLIP11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 LARP1Q6PKG0 1096 aaKnown RBP11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 CWC27Q6UX04 472 aaKnown RBP11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 USP48Q86UV5 1035 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 NAP1L5Q96NT1 182 aaPredicted RBP11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 ALDH8A1Q9H2A2 487 aaPredicted RBP11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 TSPY26PQ9H489 355 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 AXIN2Q9Y2T1 843 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 CCDC171Q6TFL3 1326 aa11.57□□□□□ -0.56
IGHV3-54-201ENST00000622166 KDM6AO15550 1401 aaPredicted RBP11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 PHF14O94880 888 aa11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 PDIA4P13667 645 aaKnown RBP11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 MCM5P33992 734 aa11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 CWF19L2Q2TBE0 894 aaKnown RBP11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 UVSSAQ2YD98 709 aa11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 AACSQ86V21 672 aa11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 SLC52A2Q9HAB3 445 aa11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 PA2G4Q9UQ80 394 aaKnown RBP11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 SPG7Q9UQ90 795 aa11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 TCHHQ07283 1943 aa11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 ERBB3P21860 1342 aa11.56□□□□□ -0.56
IGHV3-54-201ENST00000622166 JCADQ9P266 1359 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 PKD1L3Q7Z443 1732 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 PRAMEF22A3QJZ6 481 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 STX6O43752 255 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 ZNF500O60304 480 aaPredicted RBP11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 OFD1O75665 1012 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 LETM1O95202 739 aaPredicted RBP11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 IGKV5-2P06315 115 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 MAP4K1Q92918 833 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 EAF2Q96CJ1 260 aaPredicted RBP11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 BICC1Q9H694 974 aaKnown RBP11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 PDRG1Q9NUG6 133 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 NOL7Q9UMY1 257 aaKnown RBP11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 SMC3Q9UQE7 1217 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 CYP46A1Q9Y6A2 500 aa11.55□□□□□ -0.56
IGHV3-54-201ENST00000622166 NEURL1BA8MQ27 555 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 GADD45BO75293 160 aaPredicted RBP11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 F13A1P00488 732 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 PHKG2P15735 406 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 TATP17735 454 aaPredicted RBP11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 SYT1P21579 422 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 TERF1P54274 439 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 ZNF790Q6PG37 636 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 JAKMIP1Q96N16 626 aaKnown RBP11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 METTL22Q9BUU2 404 aaPredicted RBP11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 CCDC39Q9UFE4 941 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 ATP6V1DQ9Y5K8 247 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms