RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 THUMPD2Q9BTF0 503 aaKnown RBP11.17□□□□□ -0.62
GTF2I-219ENST00000621040 CAMTA2O94983 1202 aa11.17□□□□□ -0.62
GTF2I-219ENST00000621040 USP16Q9Y5T5 823 aa11.16□□□□□ -0.62
GTF2I-219ENST00000621040 ZNF646O15015 1829 aaPredicted RBP11.16□□□□□ -0.62
GTF2I-219ENST00000621040 AAMPQ13685 434 aa11.16□□□□□ -0.62
GTF2I-219ENST00000621040 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
GTF2I-219ENST00000621040 SMIM5Q71RC9 77 aa11.16□□□□□ -0.62
GTF2I-219ENST00000621040 CD2APQ9Y5K6 639 aa11.16□□□□□ -0.62
GTF2I-219ENST00000621040 TIAM2Q8IVF5 1701 aa11.16□□□□□ -0.62
GTF2I-219ENST00000621040 SNED1Q8TER0 1413 aa11.16□□□□□ -0.62
GTF2I-219ENST00000621040 TTC5Q8N0Z6 440 aa11.16□□□□□ -0.62
GTF2I-219ENST00000621040 POLRMTO00411 1230 aaKnown RBP11.15□□□□□ -0.62
GTF2I-219ENST00000621040 ARXQ96QS3 562 aa11.15□□□□□ -0.62
GTF2I-219ENST00000621040 STARD3NLO95772 234 aa11.15□□□□□ -0.62
GTF2I-219ENST00000621040 DDR1Q08345 913 aa11.15□□□□□ -0.62
GTF2I-219ENST00000621040 WWC1Q8IX03 1113 aa11.15□□□□□ -0.62
GTF2I-219ENST00000621040 APAF1O14727 1248 aa11.15□□□□□ -0.63
GTF2I-219ENST00000621040 A0A087WZG4 1122 aa11.14□□□□□ -0.63
GTF2I-219ENST00000621040 FAM43AQ8N2R8 423 aa11.14□□□□□ -0.63
GTF2I-219ENST00000621040 PDE4CQ08493 712 aa11.14□□□□□ -0.63
GTF2I-219ENST00000621040 MBIPQ9NS73 344 aa11.14□□□□□ -0.63
GTF2I-219ENST00000621040 WDR63Q8IWG1 891 aa11.13□□□□□ -0.63
GTF2I-219ENST00000621040 NLGN1Q8N2Q7 840 aa11.13□□□□□ -0.63
GTF2I-219ENST00000621040 TRMT2AQ8IZ69 625 aaKnown RBP11.13□□□□□ -0.63
GTF2I-219ENST00000621040 SYT17Q9BSW7 474 aa11.13□□□□□ -0.63
GTF2I-219ENST00000621040 ATF5Q9Y2D1 282 aaPredicted RBP11.13□□□□□ -0.63
GTF2I-219ENST00000621040 NEFMP07197 916 aa11.13□□□□□ -0.63
GTF2I-219ENST00000621040 CLEC4GQ6UXB4 293 aa11.13□□□□□ -0.63
GTF2I-219ENST00000621040 FHDC1Q9C0D6 1143 aaPredicted RBP11.13□□□□□ -0.63
GTF2I-219ENST00000621040 BRPF3Q9ULD4 1205 aa11.13□□□□□ -0.63
GTF2I-219ENST00000621040 ERVV-1B6SEH8 477 aa11.12□□□□□ -0.63
GTF2I-219ENST00000621040 SRP68Q9UHB9 627 aaKnown RBP11.12□□□□□ -0.63
GTF2I-219ENST00000621040 CCDC88AQ3V6T2 1871 aa11.12□□□□□ -0.63
GTF2I-219ENST00000621040 KLRG2A4D1S0 409 aaPredicted RBP11.12□□□□□ -0.63
GTF2I-219ENST00000621040 A1BGP04217 495 aa11.12□□□□□ -0.63
GTF2I-219ENST00000621040 KCNA3P22001 575 aa11.12□□□□□ -0.63
GTF2I-219ENST00000621040 MIS18AQ9NYP9 233 aa11.12□□□□□ -0.63
GTF2I-219ENST00000621040 RRP7AQ9Y3A4 280 aaKnown RBP11.12□□□□□ -0.63
GTF2I-219ENST00000621040 ADCY9O60503 1353 aa11.12□□□□□ -0.63
GTF2I-219ENST00000621040 SLX4Q8IY92 1834 aa11.12□□□□□ -0.63
GTF2I-219ENST00000621040 CALD1Q05682 793 aaKnown RBP11.11□□□□□ -0.63
GTF2I-219ENST00000621040 CARMIL3Q8ND23 1372 aa11.11□□□□□ -0.63
GTF2I-219ENST00000621040 COL4A1P02462 1669 aa11.11□□□□□ -0.63
GTF2I-219ENST00000621040 TSPYL4Q9UJ04 414 aa11.11□□□□□ -0.63
GTF2I-219ENST00000621040 GNAI1P63096 354 aa11.1□□□□□ -0.63
GTF2I-219ENST00000621040 RBM10P98175 930 aaKnown RBP11.1□□□□□ -0.63
GTF2I-219ENST00000621040 PSME4Q14997 1843 aa11.1□□□□□ -0.63
GTF2I-219ENST00000621040 PHF14O94880 888 aa11.1□□□□□ -0.63
GTF2I-219ENST00000621040 USPL1Q5W0Q7 1092 aa11.1□□□□□ -0.63
GTF2I-219ENST00000621040 POLD1P28340 1107 aa11.1□□□□□ -0.63
GTF2I-219ENST00000621040 NFIXQ14938 502 aa11.1□□□□□ -0.63
GTF2I-219ENST00000621040 RFC4P35249 363 aa11.09□□□□□ -0.63
GTF2I-219ENST00000621040 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
GTF2I-219ENST00000621040 MMP10P09238 476 aa11.09□□□□□ -0.63
GTF2I-219ENST00000621040 TGFB2P61812 414 aa11.09□□□□□ -0.63
GTF2I-219ENST00000621040 NLGN2Q8NFZ4 835 aa11.09□□□□□ -0.63
GTF2I-219ENST00000621040 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
GTF2I-219ENST00000621040 PDIA4P13667 645 aaKnown RBP11.09□□□□□ -0.63
GTF2I-219ENST00000621040 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
GTF2I-219ENST00000621040 ZNF34Q8IZ26 560 aa11.08□□□□□ -0.64
GTF2I-219ENST00000621040 TBC1D9BQ66K14 1250 aa11.08□□□□□ -0.64
GTF2I-219ENST00000621040 DDX21Q9NR30 783 aaKnown RBP eCLIP11.08□□□□□ -0.64
GTF2I-219ENST00000621040 RRP9O43818 475 aaKnown RBP11.07□□□□□ -0.64
GTF2I-219ENST00000621040 PROSER3Q2NL68 480 aa11.07□□□□□ -0.64
GTF2I-219ENST00000621040 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
GTF2I-219ENST00000621040 KRT24Q2M2I5 525 aa11.07□□□□□ -0.64
GTF2I-219ENST00000621040 SPEF2Q9C093 1822 aa11.07□□□□□ -0.64
GTF2I-219ENST00000621040 ANP32AP39687 249 aaKnown RBP11.07□□□□□ -0.64
GTF2I-219ENST00000621040 UBN2Q6ZU65 1347 aa11.07□□□□□ -0.64
GTF2I-219ENST00000621040 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
GTF2I-219ENST00000621040 C8orf58Q8NAV2 365 aa11.06□□□□□ -0.64
GTF2I-219ENST00000621040 DUOX1Q9NRD9 1551 aa11.06□□□□□ -0.64
GTF2I-219ENST00000621040 TAF1P21675 1872 aa11.06□□□□□ -0.64
GTF2I-219ENST00000621040 CANXP27824 592 aaKnown RBP11.06□□□□□ -0.64
GTF2I-219ENST00000621040 YBX3P16989 372 aaKnown RBP eCLIP11.05□□□□□ -0.64
GTF2I-219ENST00000621040 HLFQ16534 295 aa11.05□□□□□ -0.64
GTF2I-219ENST00000621040 DUSP27Q5VZP5 1158 aa11.05□□□□□ -0.64
GTF2I-219ENST00000621040 WDR90Q96KV7 1748 aa11.05□□□□□ -0.64
GTF2I-219ENST00000621040 ZPR1O75312 459 aa11.05□□□□□ -0.64
GTF2I-219ENST00000621040 GIGYF2Q6Y7W6 1299 aaKnown RBP11.05□□□□□ -0.64
GTF2I-219ENST00000621040 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
GTF2I-219ENST00000621040 CRY2Q49AN0 593 aa11.04□□□□□ -0.64
GTF2I-219ENST00000621040 PRR5LQ6MZQ0 368 aa11.04□□□□□ -0.64
GTF2I-219ENST00000621040 TTLL7Q6ZT98 887 aa11.04□□□□□ -0.64
GTF2I-219ENST00000621040 ABCC12Q96J65 1359 aa11.04□□□□□ -0.64
GTF2I-219ENST00000621040 TRIM28Q13263 835 aaKnown RBP11.04□□□□□ -0.64
GTF2I-219ENST00000621040 GSE1Q14687 1217 aa11.04□□□□□ -0.64
GTF2I-219ENST00000621040 TSPYL6Q8N831 410 aa11.04□□□□□ -0.64
GTF2I-219ENST00000621040 ADAMTSL1Q8N6G6 1762 aa11.04□□□□□ -0.64
GTF2I-219ENST00000621040 NTSR2O95665 410 aa11.03□□□□□ -0.64
GTF2I-219ENST00000621040 ISCA1Q9BUE6 129 aa11.03□□□□□ -0.64
GTF2I-219ENST00000621040 SLC10A5Q5PT55 438 aa11.03□□□□□ -0.64
GTF2I-219ENST00000621040 PARP3Q9Y6F1 533 aa11.03□□□□□ -0.64
GTF2I-219ENST00000621040 VAMP4O75379 141 aa11.03□□□□□ -0.64
GTF2I-219ENST00000621040 SERPINB2P05120 415 aa11.03□□□□□ -0.64
GTF2I-219ENST00000621040 CHPF2Q9P2E5 772 aa11.03□□□□□ -0.64
GTF2I-219ENST00000621040 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
GTF2I-219ENST00000621040 PIP4K2AP48426 406 aaPredicted RBP11.02□□□□□ -0.64
GTF2I-219ENST00000621040 HYPKQ9NX55 129 aa11.02□□□□□ -0.64
GTF2I-219ENST00000621040 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms