RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-223	ENST00000620632	POLRMT	O00411	1230 aa	Known RBP	13.99	□□□□□ -0.17
TARDBP-223	ENST00000620632	HLF	Q16534	295 aa		13.99	□□□□□ -0.17
TARDBP-223	ENST00000620632	CDCA7L	Q96GN5	454 aa		13.99	□□□□□ -0.17
TARDBP-223	ENST00000620632	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
TARDBP-223	ENST00000620632	EXOSC9	Q06265	439 aa	Known RBP	13.98	□□□□□ -0.17
TARDBP-223	ENST00000620632	TWISTNB	Q3B726	338 aa	Predicted RBP	13.98	□□□□□ -0.17
TARDBP-223	ENST00000620632	SYT17	Q9BSW7	474 aa		13.98	□□□□□ -0.17
TARDBP-223	ENST00000620632	C10orf71	Q711Q0	1435 aa		13.98	□□□□□ -0.17
TARDBP-223	ENST00000620632	BRCA1	P38398	1863 aa	Known RBP	13.97	□□□□□ -0.17
TARDBP-223	ENST00000620632	MAP3K15	Q6ZN16	1313 aa		13.97	□□□□□ -0.17
TARDBP-223	ENST00000620632	GOLGA2	Q08379	1002 aa		13.97	□□□□□ -0.17
TARDBP-223	ENST00000620632	BICDL1	Q6ZP65	573 aa		13.97	□□□□□ -0.17
TARDBP-223	ENST00000620632	KLHL34	Q8N239	644 aa		13.97	□□□□□ -0.17
TARDBP-223	ENST00000620632	NLGN2	Q8NFZ4	835 aa		13.97	□□□□□ -0.17
TARDBP-223	ENST00000620632	TCERG1	O14776	1098 aa	Known RBP	13.96	□□□□□ -0.17
TARDBP-223	ENST00000620632	SLFN5	Q08AF3	891 aa		13.96	□□□□□ -0.17
TARDBP-223	ENST00000620632	COPS6	Q7L5N1	327 aa		13.96	□□□□□ -0.17
TARDBP-223	ENST00000620632	NPM2	Q86SE8	214 aa	Known RBP	13.96	□□□□□ -0.17
TARDBP-223	ENST00000620632	XAGE3	Q8WTP9	111 aa		13.96	□□□□□ -0.17
TARDBP-223	ENST00000620632	ZBTB3	Q9H5J0	574 aa		13.96	□□□□□ -0.17
TARDBP-223	ENST00000620632	DBF4	Q9UBU7	674 aa	Predicted RBP	13.96	□□□□□ -0.17
TARDBP-223	ENST00000620632	PARP3	Q9Y6F1	533 aa		13.96	□□□□□ -0.17
TARDBP-223	ENST00000620632	CARMIL3	Q8ND23	1372 aa		13.96	□□□□□ -0.18
TARDBP-223	ENST00000620632	VAMP4	O75379	141 aa		13.95	□□□□□ -0.18
TARDBP-223	ENST00000620632	AIMP1	Q12904	312 aa	Known RBP	13.95	□□□□□ -0.18
TARDBP-223	ENST00000620632	MYH16	Q9H6N6	1097 aa		13.95	□□□□□ -0.18
TARDBP-223	ENST00000620632	PHAX	Q9H814	394 aa	Known RBP	13.95	□□□□□ -0.18
TARDBP-223	ENST00000620632	COL11A2	P13942	1736 aa	Predicted RBP	13.95	□□□□□ -0.18
TARDBP-223	ENST00000620632	UTRN	P46939	3433 aa		13.95	□□□□□ -0.18
TARDBP-223	ENST00000620632	DLEC1	Q9Y238	1755 aa		13.94	□□□□□ -0.18
TARDBP-223	ENST00000620632	ERVV-1	B6SEH8	477 aa		13.94	□□□□□ -0.18
TARDBP-223	ENST00000620632		E9PSI1	815 aa		13.94	□□□□□ -0.18
TARDBP-223	ENST00000620632	SERPINB2	P05120	415 aa		13.94	□□□□□ -0.18
TARDBP-223	ENST00000620632	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
TARDBP-223	ENST00000620632	CLEC4G	Q6UXB4	293 aa		13.94	□□□□□ -0.18
TARDBP-223	ENST00000620632	KIF6	Q6ZMV9	814 aa		13.94	□□□□□ -0.18
TARDBP-223	ENST00000620632	TRMT2A	Q8IZ69	625 aa	Known RBP	13.94	□□□□□ -0.18
TARDBP-223	ENST00000620632	ATP10D	Q9P241	1426 aa		13.94	□□□□□ -0.18
TARDBP-223	ENST00000620632	PXDNL	A1KZ92	1463 aa		13.93	□□□□□ -0.18
TARDBP-223	ENST00000620632	UBN2	Q6ZU65	1347 aa		13.93	□□□□□ -0.18
TARDBP-223	ENST00000620632	CCDC30	Q5VVM6	783 aa		13.93	□□□□□ -0.18
TARDBP-223	ENST00000620632	CD2AP	Q9Y5K6	639 aa		13.93	□□□□□ -0.18
TARDBP-223	ENST00000620632	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.92	□□□□□ -0.18
TARDBP-223	ENST00000620632	RGL2	O15211	777 aa		13.92	□□□□□ -0.18
TARDBP-223	ENST00000620632	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.92	□□□□□ -0.18
TARDBP-223	ENST00000620632	G2E3	Q7L622	706 aa		13.92	□□□□□ -0.18
TARDBP-223	ENST00000620632	CCDC24	Q8N4L8	307 aa		13.92	□□□□□ -0.18
TARDBP-223	ENST00000620632	HYPK	Q9NX55	129 aa		13.92	□□□□□ -0.18
TARDBP-223	ENST00000620632	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
TARDBP-223	ENST00000620632	ZNF652	Q9Y2D9	606 aa		13.92	□□□□□ -0.18
TARDBP-223	ENST00000620632	CACNA1S	Q13698	1873 aa		13.91	□□□□□ -0.18
TARDBP-223	ENST00000620632	GPT	P24298	496 aa		13.91	□□□□□ -0.18
TARDBP-223	ENST00000620632	PRR5L	Q6MZQ0	368 aa		13.91	□□□□□ -0.18
TARDBP-223	ENST00000620632	SETDB2	Q96T68	719 aa		13.91	□□□□□ -0.18
TARDBP-223	ENST00000620632	ZNF34	Q8IZ26	560 aa		13.9	□□□□□ -0.18
TARDBP-223	ENST00000620632	PLBD2	Q8NHP8	589 aa		13.9	□□□□□ -0.18
TARDBP-223	ENST00000620632	LAMB2	P55268	1798 aa		13.9	□□□□□ -0.18
TARDBP-223	ENST00000620632	FAM177B	A6PVY3	158 aa		13.89	□□□□□ -0.19
TARDBP-223	ENST00000620632	SLC4A2	P04920	1241 aa		13.89	□□□□□ -0.19
TARDBP-223	ENST00000620632	ANKRD13D	Q6ZTN6	518 aa		13.89	□□□□□ -0.19
TARDBP-223	ENST00000620632	WWC3	Q9ULE0	1092 aa		13.89	□□□□□ -0.19
TARDBP-223	ENST00000620632	DDX60	Q8IY21	1712 aa	Known RBP	13.89	□□□□□ -0.19
TARDBP-223	ENST00000620632	ADCY9	O60503	1353 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632	ABCC12	Q96J65	1359 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632		A0A0G2JLW4	131 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632	DPEP1	P16444	411 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632	KCNA3	P22001	575 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632	SUSD4	Q5VX71	490 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632	CNBD1	Q8NA66	436 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632	ZNF428	Q96B54	188 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632	STK31	Q9BXU1	1019 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632	ZBED9	Q6R2W3	1325 aa		13.88	□□□□□ -0.19
TARDBP-223	ENST00000620632	ARFGEF1	Q9Y6D6	1849 aa		13.87	□□□□□ -0.19
TARDBP-223	ENST00000620632	NTSR2	O95665	410 aa		13.87	□□□□□ -0.19
TARDBP-223	ENST00000620632	CHRNA5	P30532	468 aa		13.87	□□□□□ -0.19
TARDBP-223	ENST00000620632	TCIRG1	Q13488	830 aa		13.87	□□□□□ -0.19
TARDBP-223	ENST00000620632	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.87	□□□□□ -0.19
TARDBP-223	ENST00000620632	NUTM1	Q86Y26	1132 aa		13.87	□□□□□ -0.19
TARDBP-223	ENST00000620632	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.86	□□□□□ -0.19
TARDBP-223	ENST00000620632	ATP5J2-PTCD1	G3V325	749 aa		13.86	□□□□□ -0.19
TARDBP-223	ENST00000620632	YBX3	P16989	372 aa	Known RBP eCLIP	13.86	□□□□□ -0.19	8e-13	■□□□□ 8.1
TARDBP-223	ENST00000620632	TGFB2	P61812	414 aa		13.86	□□□□□ -0.19
TARDBP-223	ENST00000620632	FLII	Q13045	1269 aa		13.86	□□□□□ -0.19
TARDBP-223	ENST00000620632	ISCA1	Q9BUE6	129 aa		13.86	□□□□□ -0.19
TARDBP-223	ENST00000620632	PI4KAP2	A4QPH2	592 aa		13.85	□□□□□ -0.19
TARDBP-223	ENST00000620632	ERFE	Q4G0M1	354 aa		13.85	□□□□□ -0.19
TARDBP-223	ENST00000620632	RIC3	Q7Z5B4	369 aa		13.85	□□□□□ -0.19
TARDBP-223	ENST00000620632	NLRP10	Q86W26	655 aa		13.85	□□□□□ -0.19
TARDBP-223	ENST00000620632	SYNE4	Q8N205	404 aa		13.85	□□□□□ -0.19
TARDBP-223	ENST00000620632	PI4KAP1	Q8N8J0	262 aa		13.85	□□□□□ -0.19
TARDBP-223	ENST00000620632	CHMP4A	Q9BY43	222 aa		13.85	□□□□□ -0.19
TARDBP-223	ENST00000620632	MAP3K2	Q9Y2U5	619 aa		13.85	□□□□□ -0.19
TARDBP-223	ENST00000620632	TAF1	P21675	1872 aa		13.84	□□□□□ -0.19
TARDBP-223	ENST00000620632	HSP90AB3P	Q58FF7	597 aa		13.84	□□□□□ -0.19
TARDBP-223	ENST00000620632	TPTE2	Q6XPS3	522 aa		13.84	□□□□□ -0.19
TARDBP-223	ENST00000620632	MRPL50	Q8N5N7	158 aa	Known RBP	13.84	□□□□□ -0.19
TARDBP-223	ENST00000620632	SSH1	Q8WYL5	1049 aa		13.84	□□□□□ -0.19
TARDBP-223	ENST00000620632	MYD88	Q99836	296 aa		13.84	□□□□□ -0.19
TARDBP-223	ENST00000620632	BRIP1	Q9BX63	1249 aa		13.84	□□□□□ -0.19
TARDBP-223	ENST00000620632	BCL2L13	Q9BXK5	485 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms