RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 ANKARQ7Z5J8 1434 aa11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 ATP5J2-PTCD1G3V325 749 aa11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 LARP1BQ659C4 914 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 JARID2Q92833 1246 aaPredicted RBP11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 IBTKQ9P2D0 1353 aaPredicted RBP11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 STK3Q13188 491 aa11□□□□□ -0.65
RBFOX1-223ENST00000620507 GDPD2Q9HCC8 539 aa11□□□□□ -0.65
RBFOX1-223ENST00000620507 AOX1Q06278 1338 aa11□□□□□ -0.65
RBFOX1-223ENST00000620507 CRB1P82279 1406 aa11□□□□□ -0.65
RBFOX1-223ENST00000620507 GIGYF1O75420 1035 aaPredicted RBP11□□□□□ -0.65
RBFOX1-223ENST00000620507 PIP4K2AP48426 406 aaPredicted RBP11□□□□□ -0.65
RBFOX1-223ENST00000620507 GNL2Q13823 731 aaKnown RBP11□□□□□ -0.65
RBFOX1-223ENST00000620507 WASHC4Q2M389 1173 aa11□□□□□ -0.65
RBFOX1-223ENST00000620507 ZNF790Q6PG37 636 aa11□□□□□ -0.65
RBFOX1-223ENST00000620507 CHMP4CQ96CF2 233 aa11□□□□□ -0.65
RBFOX1-223ENST00000620507 NPHP3Q7Z494 1330 aa10.99□□□□□ -0.65
RBFOX1-223ENST00000620507 BEND3Q5T5X7 828 aa10.99□□□□□ -0.65
RBFOX1-223ENST00000620507 BICD2Q8TD16 824 aa10.99□□□□□ -0.65
RBFOX1-223ENST00000620507 ZSCAN23Q3MJ62 389 aa10.99□□□□□ -0.65
RBFOX1-223ENST00000620507 ARHGEF25Q86VW2 580 aa10.99□□□□□ -0.65
RBFOX1-223ENST00000620507 SH2B1Q9NRF2 756 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-223ENST00000620507 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-223ENST00000620507 PTPRUQ92729 1446 aa10.99□□□□□ -0.65
RBFOX1-223ENST00000620507 INTS4Q96HW7 963 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-223ENST00000620507 KDRP35968 1356 aa10.98□□□□□ -0.65
RBFOX1-223ENST00000620507 LETM1O95202 739 aaPredicted RBP10.98□□□□□ -0.65
RBFOX1-223ENST00000620507 BICC1Q9H694 974 aaKnown RBP10.98□□□□□ -0.65
RBFOX1-223ENST00000620507 KRT32Q14532 448 aa10.98□□□□□ -0.65
RBFOX1-223ENST00000620507 STAP2Q9UGK3 403 aa10.98□□□□□ -0.65
RBFOX1-223ENST00000620507 REREQ9P2R6 1566 aa10.98□□□□□ -0.65
RBFOX1-223ENST00000620507 SGSM2O43147 1006 aa10.98□□□□□ -0.65
RBFOX1-223ENST00000620507 CCDC57Q2TAC2 916 aa10.98□□□□□ -0.65
RBFOX1-223ENST00000620507 KIF2CQ99661 725 aa10.98□□□□□ -0.65
RBFOX1-223ENST00000620507 STX6O43752 255 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 SF3A1Q15459 793 aaKnown RBP10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 KIF6Q6ZMV9 814 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 CEP126Q9P2H0 1117 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 GOLGA6L6A8MZA4 724 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 FOSBP53539 338 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 KRT85P78386 507 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 CHAF1AQ13111 956 aaPredicted RBP10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 DCAF5Q96JK2 942 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 PALD1Q9ULE6 856 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 NPHP1O15259 732 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 APPP05067 770 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 UNC5CLQ8IV45 518 aa10.97□□□□□ -0.65
RBFOX1-223ENST00000620507 PKP1Q13835 747 aa10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 CCDC158Q5M9N0 1113 aa10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 FERMT3Q86UX7 667 aa10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 ZMYND15Q9H091 742 aa10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 ZBTB3Q9H5J0 574 aa10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 SETD1BQ9UPS6 1966 aaKnown RBP10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 ITSN1Q15811 1721 aa10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 CPLX1O14810 134 aa10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 AK2P54819 239 aa10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 FKBP4Q02790 459 aaKnown RBP eCLIP10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 CCDC39Q9UFE4 941 aa10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 RBM8AQ9Y5S9 174 aaKnown RBP10.96□□□□□ -0.65
RBFOX1-223ENST00000620507 CCDC85AQ96PX6 553 aaPredicted RBP10.96□□□□□ -0.66
RBFOX1-223ENST00000620507 SLC52A2Q9HAB3 445 aa10.96□□□□□ -0.66
RBFOX1-223ENST00000620507 GJB2P29033 226 aa10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 TRDNQ13061 729 aa10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 TOMM22Q9NS69 142 aa10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 RAD50Q92878 1312 aa10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 ATP10DQ9P241 1426 aa10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 PDIA4P13667 645 aaKnown RBP10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 HSPA4P34932 840 aa10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 PROSER3Q2NL68 480 aa10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 RALYLQ86SE5 291 aaKnown RBP10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 SUCLG2Q96I99 432 aa10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 ZNF496Q96IT1 587 aaPredicted RBP10.95□□□□□ -0.66
RBFOX1-223ENST00000620507 NMIQ13287 307 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 TTC39AQ5SRH9 613 aa10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 LMBR1LQ6UX01 489 aa10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 ZSCAN30Q86W11 494 aa10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 ANKRD26Q9UPS8 1709 aa10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 ZSCAN22P10073 491 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 CPA1P15085 419 aa10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 ZCRB1Q8TBF4 217 aaKnown RBP10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 CWC25Q9NXE8 425 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 SNX14Q9Y5W7 946 aa10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 EPB41L2O43491 1005 aaKnown RBP10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 NECAB1Q8N987 351 aa10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 TCEANC2Q96MN5 208 aa10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 LMBRD1Q9NUN5 540 aa10.94□□□□□ -0.66
RBFOX1-223ENST00000620507 PRIM1P49642 420 aaKnown RBP10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 METTL22Q9BUU2 404 aaPredicted RBP10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 TMOD3Q9NYL9 352 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 PRAMEF22A3QJZ6 481 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 SASS6Q6UVJ0 657 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 LRSAM1Q6UWE0 723 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 SSH2Q76I76 1423 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 FSD2A1L4K1 749 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 GOLGA6L19H0YKK7 550 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 IFIT1P09914 478 aaKnown RBP10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 GCKRQ14397 625 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 CPLX2Q6PUV4 134 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms