RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 EXOSC9Q06265 439 aaKnown RBP16.6■□□□□ 0.25
SRSF3-206ENST00000620242 PDIA6Q15084 440 aa16.6■□□□□ 0.25
SRSF3-206ENST00000620242 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
SRSF3-206ENST00000620242 NPHP1O15259 732 aa16.59■□□□□ 0.25
SRSF3-206ENST00000620242 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
SRSF3-206ENST00000620242 PDZRN3Q9UPQ7 1066 aa16.59■□□□□ 0.25
SRSF3-206ENST00000620242 ZBED9Q6R2W3 1325 aa16.59■□□□□ 0.25
SRSF3-206ENST00000620242 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
SRSF3-206ENST00000620242 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
SRSF3-206ENST00000620242 GIGYF2Q6Y7W6 1299 aaKnown RBP16.58■□□□□ 0.24
SRSF3-206ENST00000620242 COPS6Q7L5N1 327 aa16.58■□□□□ 0.24
SRSF3-206ENST00000620242 PLBD2Q8NHP8 589 aa16.58■□□□□ 0.24
SRSF3-206ENST00000620242 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
SRSF3-206ENST00000620242 SCN7AQ01118 1682 aa16.57■□□□□ 0.24
SRSF3-206ENST00000620242 VAMP4O75379 141 aa16.57■□□□□ 0.24
SRSF3-206ENST00000620242 NFIXQ14938 502 aa16.57■□□□□ 0.24
SRSF3-206ENST00000620242 ANKRD13DQ6ZTN6 518 aa16.57■□□□□ 0.24
SRSF3-206ENST00000620242 TSPYL6Q8N831 410 aa16.57■□□□□ 0.24
SRSF3-206ENST00000620242 XAGE3Q8WTP9 111 aa16.57■□□□□ 0.24
SRSF3-206ENST00000620242 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
SRSF3-206ENST00000620242 POLRMTO00411 1230 aaKnown RBP16.56■□□□□ 0.24
SRSF3-206ENST00000620242 SERPINB2P05120 415 aa16.56■□□□□ 0.24
SRSF3-206ENST00000620242 TGFB2P61812 414 aa16.56■□□□□ 0.24
SRSF3-206ENST00000620242 AIMP1Q12904 312 aaKnown RBP16.56■□□□□ 0.24
SRSF3-206ENST00000620242 TPTE2Q6XPS3 522 aa16.56■□□□□ 0.24
SRSF3-206ENST00000620242 LRP10Q7Z4F1 713 aa16.56■□□□□ 0.24
SRSF3-206ENST00000620242 TRMT2AQ8IZ69 625 aaKnown RBP16.56■□□□□ 0.24
SRSF3-206ENST00000620242 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
SRSF3-206ENST00000620242 NIP7Q9Y221 180 aaKnown RBP eCLIP16.56■□□□□ 0.24
SRSF3-206ENST00000620242 ATP10DQ9P241 1426 aa16.55■□□□□ 0.24
SRSF3-206ENST00000620242 RNF123Q5XPI4 1314 aa16.55■□□□□ 0.24
SRSF3-206ENST00000620242 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
SRSF3-206ENST00000620242 ST5P78524 1137 aa16.55■□□□□ 0.24
SRSF3-206ENST00000620242 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
SRSF3-206ENST00000620242 TTLL7Q6ZT98 887 aa16.55■□□□□ 0.24
SRSF3-206ENST00000620242 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
SRSF3-206ENST00000620242 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
SRSF3-206ENST00000620242 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
SRSF3-206ENST00000620242 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
SRSF3-206ENST00000620242 GTF2E1P29083 439 aaPredicted RBP16.54■□□□□ 0.24
SRSF3-206ENST00000620242 PROSER3Q2NL68 480 aa16.54■□□□□ 0.24
SRSF3-206ENST00000620242 ALDH1L2Q3SY69 923 aa16.54■□□□□ 0.24
SRSF3-206ENST00000620242 BICDL1Q6ZP65 573 aa16.54■□□□□ 0.24
SRSF3-206ENST00000620242 RIC3Q7Z5B4 369 aa16.54■□□□□ 0.24
SRSF3-206ENST00000620242 NBPF5PQ86XG9 351 aaPredicted RBP16.54■□□□□ 0.24
SRSF3-206ENST00000620242 KLHL34Q8N239 644 aa16.54■□□□□ 0.24
SRSF3-206ENST00000620242 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
SRSF3-206ENST00000620242 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
SRSF3-206ENST00000620242 CACNA1FO60840 1977 aa16.54■□□□□ 0.24
SRSF3-206ENST00000620242 BCORQ6W2J9 1755 aa16.54■□□□□ 0.24
SRSF3-206ENST00000620242 IBTKQ9P2D0 1353 aaPredicted RBP16.53■□□□□ 0.24
SRSF3-206ENST00000620242 ANXA1P04083 346 aa16.53■□□□□ 0.24
SRSF3-206ENST00000620242 NEXNQ0ZGT2 675 aa16.53■□□□□ 0.24
SRSF3-206ENST00000620242 DDR1Q08345 913 aa16.52■□□□□ 0.24
SRSF3-206ENST00000620242 TCIRG1Q13488 830 aa16.52■□□□□ 0.24
SRSF3-206ENST00000620242 HLFQ16534 295 aa16.52■□□□□ 0.24
SRSF3-206ENST00000620242 PDE6BP35913 854 aa16.51■□□□□ 0.23
SRSF3-206ENST00000620242 TRIM28Q13263 835 aaKnown RBP16.51■□□□□ 0.23
SRSF3-206ENST00000620242 KSR2Q6VAB6 950 aa16.51■□□□□ 0.23
SRSF3-206ENST00000620242 ZNF34Q8IZ26 560 aa16.51■□□□□ 0.23
SRSF3-206ENST00000620242 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
SRSF3-206ENST00000620242 C10orf71Q711Q0 1435 aa16.51■□□□□ 0.23
SRSF3-206ENST00000620242 FLIIQ13045 1269 aa16.5■□□□□ 0.23
SRSF3-206ENST00000620242 FKBP5Q13451 457 aaPredicted RBP16.5■□□□□ 0.23
SRSF3-206ENST00000620242 BRIP1Q9BX63 1249 aa16.5■□□□□ 0.23
SRSF3-206ENST00000620242 PHAXQ9H814 394 aaKnown RBP16.5■□□□□ 0.23
SRSF3-206ENST00000620242 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
SRSF3-206ENST00000620242 PTPRCP08575 1304 aa16.48■□□□□ 0.23
SRSF3-206ENST00000620242 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
SRSF3-206ENST00000620242 METTL22Q9BUU2 404 aaPredicted RBP16.48■□□□□ 0.23
SRSF3-206ENST00000620242 NUP98P52948 1817 aa16.47■□□□□ 0.23
SRSF3-206ENST00000620242 H0YIN7 160 aa16.47■□□□□ 0.23
SRSF3-206ENST00000620242 BRPF1P55201 1214 aaPredicted RBP16.47■□□□□ 0.23
SRSF3-206ENST00000620242 PRR5LQ6MZQ0 368 aa16.47■□□□□ 0.23
SRSF3-206ENST00000620242 NRXN2Q9P2S2 1712 aa16.46■□□□□ 0.23
SRSF3-206ENST00000620242 PI4KAP2A4QPH2 592 aa16.46■□□□□ 0.23
SRSF3-206ENST00000620242 GPTP24298 496 aa16.46■□□□□ 0.23
SRSF3-206ENST00000620242 NLRP10Q86W26 655 aa16.46■□□□□ 0.23
SRSF3-206ENST00000620242 PI4KAP1Q8N8J0 262 aa16.46■□□□□ 0.23
SRSF3-206ENST00000620242 ISCA1Q9BUE6 129 aa16.46■□□□□ 0.23
SRSF3-206ENST00000620242 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
SRSF3-206ENST00000620242 MAP3K2Q9Y2U5 619 aa16.46■□□□□ 0.23
SRSF3-206ENST00000620242 KIF16BQ96L93 1317 aa16.45■□□□□ 0.22
SRSF3-206ENST00000620242 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
SRSF3-206ENST00000620242 DNAAF4Q8WXU2 420 aa16.45■□□□□ 0.22
SRSF3-206ENST00000620242 PIM2Q9P1W9 311 aa16.45■□□□□ 0.22
SRSF3-206ENST00000620242 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
SRSF3-206ENST00000620242 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
SRSF3-206ENST00000620242 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
SRSF3-206ENST00000620242 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
SRSF3-206ENST00000620242 TCERG1O14776 1098 aaKnown RBP16.44■□□□□ 0.22
SRSF3-206ENST00000620242 IPO8O15397 1037 aaKnown RBP16.44■□□□□ 0.22
SRSF3-206ENST00000620242 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
SRSF3-206ENST00000620242 CWC25Q9NXE8 425 aaPredicted RBP16.44■□□□□ 0.22
SRSF3-206ENST00000620242 UBN2Q6ZU65 1347 aa16.44■□□□□ 0.22
SRSF3-206ENST00000620242 NTSR2O95665 410 aa16.43■□□□□ 0.22
SRSF3-206ENST00000620242 GPR162Q16538 588 aa16.43■□□□□ 0.22
SRSF3-206ENST00000620242 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
SRSF3-206ENST00000620242 LINS1Q8NG48 757 aa16.43■□□□□ 0.22
SRSF3-206ENST00000620242 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms