RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 PDRG1Q9NUG6 133 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 HYPKQ9NX55 129 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 SPG7Q9UQ90 795 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 FOXO3O43524 673 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 HSP90AB2PQ58FF8 381 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 LUZP1Q86V48 1076 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 PI4K2BQ8TCG2 481 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 CAMK4Q16566 473 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 JAKMIP1Q96N16 626 aaKnown RBP10.33□□□□□ -0.76
C9orf72-206ENST00000619707 CGNQ9P2M7 1197 aaKnown RBP10.33□□□□□ -0.76
C9orf72-206ENST00000619707 MRVI1Q9Y6F6 885 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 C3P01024 1663 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 TNNT1P13805 278 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 VPS53Q5VIR6 699 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 RHPN1Q8TCX5 695 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 SSH3Q8TE77 659 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 TRIM5Q9C035 493 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 TNMDQ9H2S6 317 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 CYP46A1Q9Y6A2 500 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 GOLGA6L4A6NEF3 574 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 GTF2E1P29083 439 aaPredicted RBP10.33□□□□□ -0.76
C9orf72-206ENST00000619707 MTHFSDQ2M296 383 aaKnown RBP10.33□□□□□ -0.76
C9orf72-206ENST00000619707 TAF3Q5VWG9 929 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 CCDC112Q8NEF3 446 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 PAXBP1Q9Y5B6 917 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 ITSN1Q15811 1721 aa10.33□□□□□ -0.76
C9orf72-206ENST00000619707 TTC21BQ7Z4L5 1316 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 DTNBO60941 627 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 LRMPQ12912 555 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 TXNDC2Q86VQ3 553 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 RUFY2Q8WXA3 655 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 KIF1BPQ96EK5 621 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 USP44Q9H0E7 712 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 ANO6Q4KMQ2 910 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 LARP1BQ659C4 914 aaKnown RBP10.32□□□□□ -0.76
C9orf72-206ENST00000619707 PPP1R42Q7Z4L9 355 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 TTC6Q86TZ1 520 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 CBX8Q9HC52 389 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 CTNNA3Q9UI47 895 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 NEO1Q92859 1461 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 LIG1P18858 919 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 GABPB1Q06547 395 aaPredicted RBP10.32□□□□□ -0.76
C9orf72-206ENST00000619707 TPD52L1Q16890 204 aaPredicted RBP10.32□□□□□ -0.76
C9orf72-206ENST00000619707 ZSCAN25Q6NSZ9 544 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 CKAP2LQ8IYA6 745 aa10.32□□□□□ -0.76
C9orf72-206ENST00000619707 SOX12O15370 315 aa10.31□□□□□ -0.76
C9orf72-206ENST00000619707 ZNF75DP51815 510 aa10.31□□□□□ -0.76
C9orf72-206ENST00000619707 PRPF40BQ6NWY9 871 aaKnown RBP10.31□□□□□ -0.76
C9orf72-206ENST00000619707 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.31□□□□□ -0.76
C9orf72-206ENST00000619707 XRN1Q8IZH2 1706 aaKnown RBP10.31□□□□□ -0.76
C9orf72-206ENST00000619707 AKAP12Q02952 1782 aa10.31□□□□□ -0.76
C9orf72-206ENST00000619707 ELP1O95163 1332 aa10.31□□□□□ -0.76
C9orf72-206ENST00000619707 MAP3K19Q56UN5 1328 aa10.31□□□□□ -0.76
C9orf72-206ENST00000619707 FERMT3Q86UX7 667 aa10.31□□□□□ -0.76
C9orf72-206ENST00000619707 DACT1Q9NYF0 836 aa10.31□□□□□ -0.76
C9orf72-206ENST00000619707 NRBP1Q9UHY1 535 aa10.31□□□□□ -0.76
C9orf72-206ENST00000619707 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 PDCP20941 246 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 NECAB1Q8N987 351 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 TM6SF1Q9BZW5 370 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 ZSWIM6Q9HCJ5 1215 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 ZKSCAN1P17029 563 aaPredicted RBP10.3□□□□□ -0.76
C9orf72-206ENST00000619707 ADCK5Q3MIX3 580 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 PLA2G4DQ86XP0 818 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 DDX19AQ9NUU7 478 aaKnown RBP10.3□□□□□ -0.76
C9orf72-206ENST00000619707 PXDNLA1KZ92 1463 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
C9orf72-206ENST00000619707 ME3Q16798 604 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 TEX2Q8IWB9 1127 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 SCAND2PQ9GZW5 306 aaPredicted RBP10.3□□□□□ -0.76
C9orf72-206ENST00000619707 CLIP2Q9UDT6 1046 aa10.3□□□□□ -0.76
C9orf72-206ENST00000619707 DDX41Q9UJV9 622 aaKnown RBP10.3□□□□□ -0.76
C9orf72-206ENST00000619707 FAM208AQ9UK61 1670 aaKnown RBP10.29□□□□□ -0.76
C9orf72-206ENST00000619707 CCDC171Q6TFL3 1326 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 SETD1AO15047 1707 aaKnown RBP10.29□□□□□ -0.76
C9orf72-206ENST00000619707 RGPD1P0DJD0 1748 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 GLRX3O76003 335 aaKnown RBP10.29□□□□□ -0.76
C9orf72-206ENST00000619707 PTH1RQ03431 593 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 POLA2Q14181 598 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 CDC37L1Q7L3B6 337 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 SPATA32Q96LK8 384 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 KCNJ4P48050 445 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 OS9Q13438 667 aaPredicted RBP10.29□□□□□ -0.76
C9orf72-206ENST00000619707 HSP90AB4PQ58FF6 505 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 FAM173BQ6P4H8 233 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 TDRD7Q8NHU6 1098 aaKnown RBP10.29□□□□□ -0.76
C9orf72-206ENST00000619707 NPHP3Q7Z494 1330 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 MAP3K5Q99683 1374 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 A2ML1A8K2U0 1454 aa10.29□□□□□ -0.76
C9orf72-206ENST00000619707 ZNF165P49910 485 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 ST3GAL1Q11201 340 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 NAA30Q147X3 362 aaPredicted RBP10.28□□□□□ -0.76
C9orf72-206ENST00000619707 CEP135Q66GS9 1140 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 CLSTN2Q9H4D0 955 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 SPATA31D1Q6ZQQ2 1576 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 TTC41PQ6P2S7 1318 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms