RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 FKBP5Q13451 457 aaPredicted RBP16.39■□□□□ 0.21
CNTNAP3B-215ENST00000619138 CLEC17AQ6ZS10 378 aa16.39■□□□□ 0.21
CNTNAP3B-215ENST00000619138 COL3A1P02461 1466 aaPredicted RBP16.39■□□□□ 0.21
CNTNAP3B-215ENST00000619138 SHPRHQ149N8 1683 aa16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 LUZP1Q86V48 1076 aa16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 TFIP11Q9UBB9 837 aaKnown RBP16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 NALCNQ8IZF0 1738 aa16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 PIP4K2BP78356 416 aa16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 ANKRD24Q8TF21 1146 aa16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 TCEANC2Q96MN5 208 aa16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 TRMT1Q9NXH9 659 aaKnown RBP16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 CWC27Q6UX04 472 aaKnown RBP16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 IP6K1Q92551 441 aa16.38■□□□□ 0.21
CNTNAP3B-215ENST00000619138 NBPF6Q5VWK0 638 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 NBPF4Q96M43 638 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 ESYT1Q9BSJ8 1104 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 IL16Q14005 1332 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 KDM4AO75164 1064 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 NAP1L2Q9ULW6 460 aaPredicted RBP16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 PPFIA3O75145 1194 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 G2E3Q7L622 706 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 RPAP2Q8IXW5 612 aaPredicted RBP16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 PRDM11Q9NQV5 511 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 TSPYL4Q9UJ04 414 aa16.37■□□□□ 0.21
CNTNAP3B-215ENST00000619138 LRRC7Q96NW7 1537 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 MON2Q7Z3U7 1717 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 TNNT1P13805 278 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 UNC5CLQ8IV45 518 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 USP31Q70CQ4 1352 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 STK3Q13188 491 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 STRN4Q9NRL3 753 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 MX1P20591 662 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 FGD1P98174 961 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 BRINP3Q76B58 766 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 NRBP1Q9UHY1 535 aa16.36■□□□□ 0.21
CNTNAP3B-215ENST00000619138 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
CNTNAP3B-215ENST00000619138 FILIP1Q7Z7B0 1213 aa16.35■□□□□ 0.21
CNTNAP3B-215ENST00000619138 FAM184AQ8NB25 1140 aa16.35■□□□□ 0.21
CNTNAP3B-215ENST00000619138 AKAP12Q02952 1782 aa16.35■□□□□ 0.21
CNTNAP3B-215ENST00000619138 CCDC112Q8NEF3 446 aa16.35■□□□□ 0.21
CNTNAP3B-215ENST00000619138 LMTK3Q96Q04 1460 aa16.35■□□□□ 0.21
CNTNAP3B-215ENST00000619138 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
CNTNAP3B-215ENST00000619138 LRRCC1Q9C099 1032 aa16.34■□□□□ 0.21
CNTNAP3B-215ENST00000619138 ANKRD26Q9UPS8 1709 aa16.34■□□□□ 0.21
CNTNAP3B-215ENST00000619138 STX6O43752 255 aa16.34■□□□□ 0.21
CNTNAP3B-215ENST00000619138 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
CNTNAP3B-215ENST00000619138 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
CNTNAP3B-215ENST00000619138 GTPBP4Q9BZE4 634 aaKnown RBP16.34■□□□□ 0.21
CNTNAP3B-215ENST00000619138 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
CNTNAP3B-215ENST00000619138 FMN2Q9NZ56 1722 aa16.33■□□□□ 0.21
CNTNAP3B-215ENST00000619138 CASTP20810 708 aaKnown RBP16.33■□□□□ 0.21
CNTNAP3B-215ENST00000619138 SURF6O75683 361 aaKnown RBP16.33■□□□□ 0.2
CNTNAP3B-215ENST00000619138 SYT1P21579 422 aa16.33■□□□□ 0.2
CNTNAP3B-215ENST00000619138 MCM2P49736 904 aa16.33■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ARHGAP45Q92619 1136 aa16.33■□□□□ 0.2
CNTNAP3B-215ENST00000619138 RAPGEF4Q8WZA2 1011 aa16.33■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ABCC4O15439 1325 aa16.33■□□□□ 0.2
CNTNAP3B-215ENST00000619138 CCDC192P0DO97 292 aa16.32■□□□□ 0.2
CNTNAP3B-215ENST00000619138 EVA1CP58658 441 aa16.32■□□□□ 0.2
CNTNAP3B-215ENST00000619138 C1orf141Q5JVX7 400 aa16.32■□□□□ 0.2
CNTNAP3B-215ENST00000619138 STK31Q9BXU1 1019 aa16.32■□□□□ 0.2
CNTNAP3B-215ENST00000619138 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ARHGEF25Q86VW2 580 aa16.32■□□□□ 0.2
CNTNAP3B-215ENST00000619138 GNAT3A8MTJ3 354 aa16.32■□□□□ 0.2
CNTNAP3B-215ENST00000619138 LETM1O95202 739 aaPredicted RBP16.32■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ZSCAN22P10073 491 aaPredicted RBP16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 AP5Z1O43299 807 aa16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 AK2P54819 239 aa16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 TEFQ10587 303 aa16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 A0A087WWV3 80 aa16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 CHMLP26374 656 aa16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 GJB2P29033 226 aa16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 JAKMIP1Q96N16 626 aaKnown RBP16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ZNF330Q9Y3S2 320 aaPredicted RBP16.31■□□□□ 0.2
CNTNAP3B-215ENST00000619138 GNAI2P04899 355 aa16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 UBE2HP62256 183 aa16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ZFP91Q96JP5 570 aaPredicted RBP16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 KCNF1Q9H3M0 494 aa16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 EIF2S2P20042 333 aaKnown RBP16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 SKIDA1Q1XH10 827 aa16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 MST1RQ04912 1400 aa16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 TOPAZ1Q8N9V7 1692 aa16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 PNMA6EA0A0J9YXQ4 647 aa16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 UTP14CQ5TAP6 766 aaKnown RBP16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 TOM1L2Q6ZVM7 507 aa16.3■□□□□ 0.2
CNTNAP3B-215ENST00000619138 IGSF1Q8N6C5 1336 aa16.29■□□□□ 0.2
CNTNAP3B-215ENST00000619138 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
CNTNAP3B-215ENST00000619138 IL25Q9H293 177 aa16.29■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ATP6V1DQ9Y5K8 247 aa16.29■□□□□ 0.2
CNTNAP3B-215ENST00000619138 LRRFIP2Q9Y608 721 aaKnown RBP16.29■□□□□ 0.2
CNTNAP3B-215ENST00000619138 KIAA1524Q8TCG1 905 aa16.29■□□□□ 0.2
CNTNAP3B-215ENST00000619138 NUP62CLQ9H1M0 184 aa16.29■□□□□ 0.2
CNTNAP3B-215ENST00000619138 UVSSAQ2YD98 709 aa16.28■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ANO6Q4KMQ2 910 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms