RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 GIMAP6Q6P9H5 292 aa16.65■□□□□ 0.26
PTPN9-206ENST00000618819 CPLX4Q7Z7G2 160 aa16.65■□□□□ 0.26
PTPN9-206ENST00000618819 WASHC2AQ641Q2 1341 aa16.64■□□□□ 0.25
PTPN9-206ENST00000618819 SREK1Q8WXA9 508 aaKnown RBP16.64■□□□□ 0.25
PTPN9-206ENST00000618819 CAPZA3Q96KX2 299 aa16.64■□□□□ 0.25
PTPN9-206ENST00000618819 TBC1D2Q9BYX2 928 aa16.64■□□□□ 0.25
PTPN9-206ENST00000618819 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
PTPN9-206ENST00000618819 CCDC129Q6ZRS4 1044 aa16.64■□□□□ 0.25
PTPN9-206ENST00000618819 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
PTPN9-206ENST00000618819 DDX19AQ9NUU7 478 aaKnown RBP16.64■□□□□ 0.25
PTPN9-206ENST00000618819 NLRP6P59044 892 aa16.63■□□□□ 0.25
PTPN9-206ENST00000618819 TMEM57Q8N5G2 664 aa16.63■□□□□ 0.25
PTPN9-206ENST00000618819 KRT13P13646 458 aa16.63■□□□□ 0.25
PTPN9-206ENST00000618819 TNIP1Q15025 636 aa16.63■□□□□ 0.25
PTPN9-206ENST00000618819 ACTN2P35609 894 aa16.63■□□□□ 0.25
PTPN9-206ENST00000618819 CLNS1AP54105 237 aaKnown RBP16.63■□□□□ 0.25
PTPN9-206ENST00000618819 PPP4R3AQ6IN85 833 aa16.63■□□□□ 0.25
PTPN9-206ENST00000618819 GTF3C6Q969F1 213 aa16.63■□□□□ 0.25
PTPN9-206ENST00000618819 PPP1R12CQ9BZL4 782 aa16.63■□□□□ 0.25
PTPN9-206ENST00000618819 PTGS1P23219 599 aa16.63■□□□□ 0.25
PTPN9-206ENST00000618819 GJB2P29033 226 aa16.62■□□□□ 0.25
PTPN9-206ENST00000618819 SKILP12757 684 aa16.62■□□□□ 0.25
PTPN9-206ENST00000618819 DNAI2Q9GZS0 605 aa16.62■□□□□ 0.25
PTPN9-206ENST00000618819 MRPS9P82933 396 aaKnown RBP16.62■□□□□ 0.25
PTPN9-206ENST00000618819 MIA2Q96PC5 1412 aa16.62■□□□□ 0.25
PTPN9-206ENST00000618819 A0A1B0GUL7 405 aa16.62■□□□□ 0.25
PTPN9-206ENST00000618819 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
PTPN9-206ENST00000618819 STIM2Q9P246 746 aa16.62■□□□□ 0.25
PTPN9-206ENST00000618819 ABCF2Q9UG63 623 aa16.62■□□□□ 0.25
PTPN9-206ENST00000618819 SEC62Q99442 399 aaKnown RBP16.62■□□□□ 0.25
PTPN9-206ENST00000618819 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
PTPN9-206ENST00000618819 SSX2IPQ9Y2D8 614 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 IDEP14735 1019 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 PCK1P35558 622 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 GBP7Q8N8V2 638 aaPredicted RBP16.61■□□□□ 0.25
PTPN9-206ENST00000618819 POLR3DP05423 398 aaPredicted RBP16.61■□□□□ 0.25
PTPN9-206ENST00000618819 UBASH3AP57075 661 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 EHBP1Q8NDI1 1231 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 KCNK9Q9NPC2 374 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 AKR1B10O60218 316 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 RHOXF2BP0C7M4 288 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 TMEM266Q2M3C6 531 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 RHOXF2Q9BQY4 288 aa16.61■□□□□ 0.25
PTPN9-206ENST00000618819 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
PTPN9-206ENST00000618819 RAB11FIP3O75154 756 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 GJC1P36383 396 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 SSRP1Q08945 709 aaKnown RBP16.6■□□□□ 0.25
PTPN9-206ENST00000618819 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
PTPN9-206ENST00000618819 TMEM110-MUSTN1A8MSY1 372 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 TMEM132EQ6IEE7 984 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 N4BP3O15049 544 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 PLEKHO1Q53GL0 409 aaPredicted RBP16.6■□□□□ 0.25
PTPN9-206ENST00000618819 GOLGA1Q92805 767 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 NDC80O14777 642 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 CCDC186Q7Z3E2 898 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 DZIP1Q86YF9 867 aaKnown RBP16.6■□□□□ 0.25
PTPN9-206ENST00000618819 A0A1B0GUA9 196 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 NLRP5P59047 1200 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 IFT81Q8WYA0 676 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
PTPN9-206ENST00000618819 PHAXQ9H814 394 aaKnown RBP16.6■□□□□ 0.25
PTPN9-206ENST00000618819 CLCN1P35523 988 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
PTPN9-206ENST00000618819 STMN2Q93045 179 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 RASAL2Q9UJF2 1139 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 GSTA5Q7RTV2 222 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 TLDC2A0PJX2 215 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 BAG4O95429 457 aaKnown RBP16.59■□□□□ 0.25
PTPN9-206ENST00000618819 ANO6Q4KMQ2 910 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 PPFIBP2Q8ND30 876 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 GOLGA8BA8MQT2 603 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 BUB1BO60566 1050 aaPredicted RBP16.59■□□□□ 0.25
PTPN9-206ENST00000618819 SLU7O95391 586 aaKnown RBP16.59■□□□□ 0.25
PTPN9-206ENST00000618819 MX1P20591 662 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 CETN1Q12798 172 aa16.59■□□□□ 0.25
PTPN9-206ENST00000618819 SH2B1Q9NRF2 756 aaPredicted RBP16.58■□□□□ 0.25
PTPN9-206ENST00000618819 SAMD15Q9P1V8 674 aa16.58■□□□□ 0.25
PTPN9-206ENST00000618819 SWAP70Q9UH65 585 aa16.58■□□□□ 0.25
PTPN9-206ENST00000618819 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.25
PTPN9-206ENST00000618819 RAB11FIP4Q86YS3 637 aa16.58■□□□□ 0.25
PTPN9-206ENST00000618819 TTC14Q96N46 770 aa16.58■□□□□ 0.25
PTPN9-206ENST00000618819 IFI16Q16666 785 aaKnown RBP16.58■□□□□ 0.24
PTPN9-206ENST00000618819 PPARDQ03181 441 aa16.58■□□□□ 0.24
PTPN9-206ENST00000618819 RABEP2Q9H5N1 569 aa16.58■□□□□ 0.24
PTPN9-206ENST00000618819 TTC12Q9H892 705 aaPredicted RBP16.58■□□□□ 0.24
PTPN9-206ENST00000618819 MAP3K9P80192 1104 aa16.58■□□□□ 0.24
PTPN9-206ENST00000618819 CTAGE9A4FU28 777 aa16.58■□□□□ 0.24
PTPN9-206ENST00000618819 DIXDC1Q155Q3 683 aa16.58■□□□□ 0.24
PTPN9-206ENST00000618819 TRIM47Q96LD4 638 aa16.58■□□□□ 0.24
PTPN9-206ENST00000618819 SUDS3Q9H7L9 328 aaPredicted RBP16.58■□□□□ 0.24
PTPN9-206ENST00000618819 UVSSAQ2YD98 709 aa16.57■□□□□ 0.24
PTPN9-206ENST00000618819 SULT6B1Q6IMI4 303 aa16.57■□□□□ 0.24
PTPN9-206ENST00000618819 STMN4Q9H169 189 aaPredicted RBP16.57■□□□□ 0.24
PTPN9-206ENST00000618819 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
PTPN9-206ENST00000618819 LRSAM1Q6UWE0 723 aa16.57■□□□□ 0.24
PTPN9-206ENST00000618819 SYCP3Q8IZU3 236 aa16.57■□□□□ 0.24
PTPN9-206ENST00000618819 SELENOOQ9BVL4 669 aa16.57■□□□□ 0.24
PTPN9-206ENST00000618819 STX6O43752 255 aa16.57■□□□□ 0.24
PTPN9-206ENST00000618819 ATP11AP98196 1134 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms