RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 SBF1O95248 1867 aa28.97■■■□□ 2.23
SYNGR3-206ENST00000618464 ANKRD31Q8N7Z5 1873 aa28.96■■■□□ 2.23
SYNGR3-206ENST00000618464 H0YIN7 160 aa28.96■■■□□ 2.23
SYNGR3-206ENST00000618464 RASSF7Q02833 373 aa28.96■■■□□ 2.23
SYNGR3-206ENST00000618464 CNBD1Q8NA66 436 aa28.96■■■□□ 2.23
SYNGR3-206ENST00000618464 DLEC1Q9Y238 1755 aa28.96■■■□□ 2.23
SYNGR3-206ENST00000618464 MYL6BP14649 208 aa28.94■■■□□ 2.22
SYNGR3-206ENST00000618464 CLEC4GQ6UXB4 293 aa28.94■■■□□ 2.22
SYNGR3-206ENST00000618464 TTLL6Q8N841 843 aa28.94■■■□□ 2.22
SYNGR3-206ENST00000618464 BRIP1Q9BX63 1249 aa28.93■■■□□ 2.22
SYNGR3-206ENST00000618464 TRIM35Q9UPQ4 493 aa28.93■■■□□ 2.22
SYNGR3-206ENST00000618464 PDE6BP35913 854 aa28.92■■■□□ 2.22
SYNGR3-206ENST00000618464 PRELPP51888 382 aa28.92■■■□□ 2.22
SYNGR3-206ENST00000618464 ST5P78524 1137 aa28.92■■■□□ 2.22
SYNGR3-206ENST00000618464 HLFQ16534 295 aa28.92■■■□□ 2.22
SYNGR3-206ENST00000618464 NBPF5PQ86XG9 351 aaPredicted RBP28.92■■■□□ 2.22
SYNGR3-206ENST00000618464 NIP7Q9Y221 180 aaKnown RBP eCLIP28.92■■■□□ 2.22
SYNGR3-206ENST00000618464 LAS1LQ9Y4W2 734 aaKnown RBP28.92■■■□□ 2.22
SYNGR3-206ENST00000618464 ZNF622Q969S3 477 aaKnown RBP eCLIP28.91■■■□□ 2.22
SYNGR3-206ENST00000618464 KDM2BQ8NHM5 1336 aa28.91■■■□□ 2.22
SYNGR3-206ENST00000618464 FAM177BA6PVY3 158 aa28.9■■■□□ 2.22
SYNGR3-206ENST00000618464 COL11A2P13942 1736 aaPredicted RBP28.9■■■□□ 2.22
SYNGR3-206ENST00000618464 EIF2S2P20042 333 aaKnown RBP28.9■■■□□ 2.22
SYNGR3-206ENST00000618464 TTLL7Q6ZT98 887 aa28.9■■■□□ 2.22
SYNGR3-206ENST00000618464 RRAGCQ9HB90 399 aa28.9■■■□□ 2.22
SYNGR3-206ENST00000618464 BABAM1Q9NWV8 329 aa28.9■■■□□ 2.22
SYNGR3-206ENST00000618464 ZNF316A6NFI3 1004 aaPredicted RBP28.88■■■□□ 2.21
SYNGR3-206ENST00000618464 APLP1P51693 650 aa28.88■■■□□ 2.21
SYNGR3-206ENST00000618464 KIF6Q6ZMV9 814 aa28.88■■■□□ 2.21
SYNGR3-206ENST00000618464 C16orf71Q8IYS4 520 aaPredicted RBP28.87■■■□□ 2.21
SYNGR3-206ENST00000618464 RBM46Q8TBY0 533 aaKnown RBP28.87■■■□□ 2.21
SYNGR3-206ENST00000618464 MAP3K15Q6ZN16 1313 aa28.87■■■□□ 2.21
SYNGR3-206ENST00000618464 RGL2O15211 777 aa28.86■■■□□ 2.21
SYNGR3-206ENST00000618464 LMNB1P20700 586 aa28.86■■■□□ 2.21
SYNGR3-206ENST00000618464 NECTIN2Q92692 538 aa28.86■■■□□ 2.21
SYNGR3-206ENST00000618464 ZBTB3Q9H5J0 574 aa28.86■■■□□ 2.21
SYNGR3-206ENST00000618464 PDZRN3Q9UPQ7 1066 aa28.86■■■□□ 2.21
SYNGR3-206ENST00000618464 NFKBIEO00221 500 aa28.85■■■□□ 2.21
SYNGR3-206ENST00000618464 CHL1O00533 1208 aa28.85■■■□□ 2.21
SYNGR3-206ENST00000618464 KRT24Q2M2I5 525 aa28.85■■■□□ 2.21
SYNGR3-206ENST00000618464 CCDC184Q52MB2 194 aa28.85■■■□□ 2.21
SYNGR3-206ENST00000618464 ZNF219Q9P2Y4 722 aaPredicted RBP28.85■■■□□ 2.21
SYNGR3-206ENST00000618464 ERBB4Q15303 1308 aa28.85■■■□□ 2.21
SYNGR3-206ENST00000618464 APAF1O14727 1248 aa28.84■■■□□ 2.21
SYNGR3-206ENST00000618464 ERVV-1B6SEH8 477 aa28.83■■■□□ 2.21
SYNGR3-206ENST00000618464 ANXA1P04083 346 aa28.83■■■□□ 2.21
SYNGR3-206ENST00000618464 TPTE2Q6XPS3 522 aa28.83■■■□□ 2.21
SYNGR3-206ENST00000618464 PROSER3Q2NL68 480 aa28.82■■■□□ 2.2
SYNGR3-206ENST00000618464 ZC3H4Q9UPT8 1303 aaKnown RBP28.82■■■□□ 2.2
SYNGR3-206ENST00000618464 NUP98P52948 1817 aa28.81■■■□□ 2.2
SYNGR3-206ENST00000618464 TNRC6CQ9HCJ0 1690 aaKnown RBP28.81■■■□□ 2.2
SYNGR3-206ENST00000618464 C21orf2O43822 256 aa28.81■■■□□ 2.2
SYNGR3-206ENST00000618464 PDIA6Q15084 440 aa28.81■■■□□ 2.2
SYNGR3-206ENST00000618464 DNAJC5GQ8N7S2 189 aa28.81■■■□□ 2.2
SYNGR3-206ENST00000618464 CCDC88AQ3V6T2 1871 aa28.8■■■□□ 2.2
SYNGR3-206ENST00000618464 SRGNP10124 158 aa28.8■■■□□ 2.2
SYNGR3-206ENST00000618464 GPTP24298 496 aa28.8■■■□□ 2.2
SYNGR3-206ENST00000618464 GTF2E1P29083 439 aaPredicted RBP28.8■■■□□ 2.2
SYNGR3-206ENST00000618464 GLTPD2A6NH11 291 aa28.79■■■□□ 2.2
SYNGR3-206ENST00000618464 FSTL1Q12841 308 aa28.79■■■□□ 2.2
SYNGR3-206ENST00000618464 STYK1Q6J9G0 422 aa28.79■■■□□ 2.2
SYNGR3-206ENST00000618464 LRP10Q7Z4F1 713 aa28.79■■■□□ 2.2
SYNGR3-206ENST00000618464 MASTLQ96GX5 879 aa28.79■■■□□ 2.2
SYNGR3-206ENST00000618464 CACNA1SQ13698 1873 aa28.78■■■□□ 2.2
SYNGR3-206ENST00000618464 CNKSR1Q969H4 720 aa28.78■■■□□ 2.2
SYNGR3-206ENST00000618464 HTRA3P83110 453 aa28.77■■■□□ 2.2
SYNGR3-206ENST00000618464 UBN2Q6ZU65 1347 aa28.76■■■□□ 2.19
SYNGR3-206ENST00000618464 PRPF40BQ6NWY9 871 aaKnown RBP28.76■■■□□ 2.19
SYNGR3-206ENST00000618464 NUTM1Q86Y26 1132 aa28.76■■■□□ 2.19
SYNGR3-206ENST00000618464 CFAP44Q96MT7 982 aa28.76■■■□□ 2.19
SYNGR3-206ENST00000618464 TIAM2Q8IVF5 1701 aa28.76■■■□□ 2.19
SYNGR3-206ENST00000618464 SLX4Q8IY92 1834 aa28.76■■■□□ 2.19
SYNGR3-206ENST00000618464 AIMP1Q12904 312 aaKnown RBP28.75■■■□□ 2.19
SYNGR3-206ENST00000618464 NYXQ9GZU5 481 aa28.75■■■□□ 2.19
SYNGR3-206ENST00000618464 ABCC12Q96J65 1359 aa28.75■■■□□ 2.19
SYNGR3-206ENST00000618464 WDR90Q96KV7 1748 aa28.74■■■□□ 2.19
SYNGR3-206ENST00000618464 ANP32CO43423 234 aa28.74■■■□□ 2.19
SYNGR3-206ENST00000618464 GIGYF2Q6Y7W6 1299 aaKnown RBP28.74■■■□□ 2.19
SYNGR3-206ENST00000618464 MBIPQ9NS73 344 aa28.74■■■□□ 2.19
SYNGR3-206ENST00000618464 VEGFAP15692 232 aaPredicted RBP28.73■■■□□ 2.19
SYNGR3-206ENST00000618464 NPR1P16066 1061 aa28.73■■■□□ 2.19
SYNGR3-206ENST00000618464 FER1L6Q2WGJ9 1857 aa28.73■■■□□ 2.19
SYNGR3-206ENST00000618464 ERFEQ4G0M1 354 aa28.73■■■□□ 2.19
SYNGR3-206ENST00000618464 SUSD4Q5VX71 490 aa28.73■■■□□ 2.19
SYNGR3-206ENST00000618464 XAGE3Q8WTP9 111 aa28.73■■■□□ 2.19
SYNGR3-206ENST00000618464 KLRG2A4D1S0 409 aaPredicted RBP28.72■■■□□ 2.19
SYNGR3-206ENST00000618464 IFFO2Q5TF58 517 aa28.72■■■□□ 2.19
SYNGR3-206ENST00000618464 HDGFL1Q5TGJ6 251 aa28.72■■■□□ 2.19
SYNGR3-206ENST00000618464 COPS6Q7L5N1 327 aa28.72■■■□□ 2.19
SYNGR3-206ENST00000618464 ZNF34Q8IZ26 560 aa28.72■■■□□ 2.19
SYNGR3-206ENST00000618464 CHPF2Q9P2E5 772 aa28.72■■■□□ 2.19
SYNGR3-206ENST00000618464 ARFGEF2Q9Y6D5 1785 aa28.72■■■□□ 2.19
SYNGR3-206ENST00000618464 SMC1BQ8NDV3 1235 aa28.71■■■□□ 2.19
SYNGR3-206ENST00000618464 MRS2Q9HD23 443 aa28.71■■■□□ 2.19
SYNGR3-206ENST00000618464 DDX21Q9NR30 783 aaKnown RBP eCLIP28.71■■■□□ 2.19
SYNGR3-206ENST00000618464 POTECB2RU33 542 aa28.7■■■□□ 2.18
SYNGR3-206ENST00000618464 ZNF853P0CG23 659 aa28.7■■■□□ 2.18
SYNGR3-206ENST00000618464 DUSP27Q5VZP5 1158 aa28.7■■■□□ 2.18
SYNGR3-206ENST00000618464 CALD1Q05682 793 aaKnown RBP28.69■■■□□ 2.18
SYNGR3-206ENST00000618464 IFT57Q9NWB7 429 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms