RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 SCAND2PQ9GZW5 306 aaPredicted RBP17.89■□□□□ 0.45
SRRT-217ENST00000618411 PREX1Q8TCU6 1659 aa17.89■□□□□ 0.45
SRRT-217ENST00000618411 CCDC144BQ3MJ40 725 aa17.89■□□□□ 0.45
SRRT-217ENST00000618411 CCDC144CPQ8IYA2 1237 aa17.89■□□□□ 0.45
SRRT-217ENST00000618411 KIF1BPQ96EK5 621 aa17.89■□□□□ 0.45
SRRT-217ENST00000618411 CLSTN2Q9H4D0 955 aa17.89■□□□□ 0.45
SRRT-217ENST00000618411 NPHP3Q7Z494 1330 aa17.88■□□□□ 0.45
SRRT-217ENST00000618411 PDRG1Q9NUG6 133 aa17.88■□□□□ 0.45
SRRT-217ENST00000618411 CHMP3Q9Y3E7 222 aa17.88■□□□□ 0.45
SRRT-217ENST00000618411 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
SRRT-217ENST00000618411 GOLGA6L4A6NEF3 574 aa17.88■□□□□ 0.45
SRRT-217ENST00000618411 COG3Q96JB2 828 aa17.88■□□□□ 0.45
SRRT-217ENST00000618411 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
SRRT-217ENST00000618411 SARM1Q6SZW1 724 aa17.87■□□□□ 0.45
SRRT-217ENST00000618411 PI4K2BQ8TCG2 481 aa17.87■□□□□ 0.45
SRRT-217ENST00000618411 RAB11FIP3O75154 756 aa17.87■□□□□ 0.45
SRRT-217ENST00000618411 PDCP20941 246 aa17.87■□□□□ 0.45
SRRT-217ENST00000618411 CRB1P82279 1406 aa17.87■□□□□ 0.45
SRRT-217ENST00000618411 RRS1Q15050 365 aaKnown RBP17.87■□□□□ 0.45
SRRT-217ENST00000618411 CNTROBQ8N137 903 aa17.87■□□□□ 0.45
SRRT-217ENST00000618411 TSPYL1Q9H0U9 437 aa17.87■□□□□ 0.45
SRRT-217ENST00000618411 MLH3Q9UHC1 1453 aa17.86■□□□□ 0.45
SRRT-217ENST00000618411 SOS1Q07889 1333 aaPredicted RBP17.86■□□□□ 0.45
SRRT-217ENST00000618411 KIF2AO00139 706 aaPredicted RBP17.86■□□□□ 0.45
SRRT-217ENST00000618411 SLU7O95391 586 aaKnown RBP17.86■□□□□ 0.45
SRRT-217ENST00000618411 BMS1Q14692 1282 aaKnown RBP17.86■□□□□ 0.45
SRRT-217ENST00000618411 SULT6B1Q6IMI4 303 aa17.86■□□□□ 0.45
SRRT-217ENST00000618411 MRFAP1L1Q96HT8 127 aa17.86■□□□□ 0.45
SRRT-217ENST00000618411 ZSWIM6Q9HCJ5 1215 aa17.86■□□□□ 0.45
SRRT-217ENST00000618411 CPA1P15085 419 aa17.86■□□□□ 0.45
SRRT-217ENST00000618411 ELF2Q15723 593 aa17.86■□□□□ 0.45
SRRT-217ENST00000618411 IL1RAPL2Q9NP60 686 aa17.86■□□□□ 0.45
SRRT-217ENST00000618411 KCND1Q9NSA2 647 aa17.86■□□□□ 0.45
SRRT-217ENST00000618411 CYP46A1Q9Y6A2 500 aa17.86■□□□□ 0.45
SRRT-217ENST00000618411 NUTM1Q86Y26 1132 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 ZRANB1Q9UGI0 708 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 ERICH4A6NGS2 130 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 CYP2C19P33261 490 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 ST3GAL1Q11201 340 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
SRRT-217ENST00000618411 SKILP12757 684 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 SSH3Q8TE77 659 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 KCNB2Q92953 911 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 JAKMIP1Q96N16 626 aaKnown RBP17.85■□□□□ 0.45
SRRT-217ENST00000618411 NOL10Q9BSC4 688 aaKnown RBP17.85■□□□□ 0.45
SRRT-217ENST00000618411 DNAJC25Q9H1X3 360 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
SRRT-217ENST00000618411 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
SRRT-217ENST00000618411 USP27XA6NNY8 438 aa17.84■□□□□ 0.45
SRRT-217ENST00000618411 ME3Q16798 604 aa17.84■□□□□ 0.45
SRRT-217ENST00000618411 SPATA32Q96LK8 384 aa17.84■□□□□ 0.45
SRRT-217ENST00000618411 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■■□□ 15.7
SRRT-217ENST00000618411 V9GYY5 206 aaPredicted RBP17.84■□□□□ 0.45
SRRT-217ENST00000618411 MAP4K4O95819 1239 aaPredicted RBP17.84■□□□□ 0.45
SRRT-217ENST00000618411 ZNF446Q9NWS9 450 aa17.84■□□□□ 0.45
SRRT-217ENST00000618411 SPG7Q9UQ90 795 aa17.83■□□□□ 0.45
SRRT-217ENST00000618411 ADGRL3Q9HAR2 1447 aa17.83■□□□□ 0.44
SRRT-217ENST00000618411 HTATSF1O43719 755 aaKnown RBP17.83■□□□□ 0.44
SRRT-217ENST00000618411 H2AFXP16104 143 aaPredicted RBP17.83■□□□□ 0.44
SRRT-217ENST00000618411 CAPN2P17655 700 aa17.83■□□□□ 0.44
SRRT-217ENST00000618411 CWC27Q6UX04 472 aaKnown RBP17.83■□□□□ 0.44
SRRT-217ENST00000618411 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.44
SRRT-217ENST00000618411 RUFY2Q8WXA3 655 aa17.83■□□□□ 0.44
SRRT-217ENST00000618411 TTC21BQ7Z4L5 1316 aa17.83■□□□□ 0.44
SRRT-217ENST00000618411 GOLGA6L19H0YKK7 550 aa17.82■□□□□ 0.44
SRRT-217ENST00000618411 EIF4A2Q14240 407 aaKnown RBP17.82■□□□□ 0.44
SRRT-217ENST00000618411 DLC1Q96QB1 1528 aa17.82■□□□□ 0.44
SRRT-217ENST00000618411 ALKQ9UM73 1620 aa17.82■□□□□ 0.44
SRRT-217ENST00000618411 NRKQ7Z2Y5 1582 aa17.82■□□□□ 0.44
SRRT-217ENST00000618411 ERBB3P21860 1342 aa17.82■□□□□ 0.44
SRRT-217ENST00000618411 FLIIQ13045 1269 aa17.82■□□□□ 0.44
SRRT-217ENST00000618411 IQCB1Q15051 598 aa17.82■□□□□ 0.44
SRRT-217ENST00000618411 FERMT3Q86UX7 667 aa17.82■□□□□ 0.44
SRRT-217ENST00000618411 CCAR2Q8N163 923 aaKnown RBP17.82■□□□□ 0.44
SRRT-217ENST00000618411 LEO1Q8WVC0 666 aaPredicted RBP17.82■□□□□ 0.44
SRRT-217ENST00000618411 TSPYL4Q9UJ04 414 aa17.82■□□□□ 0.44
SRRT-217ENST00000618411 ADCK5Q3MIX3 580 aa17.81■□□□□ 0.44
SRRT-217ENST00000618411 FAM173BQ6P4H8 233 aa17.81■□□□□ 0.44
SRRT-217ENST00000618411 BCL11BQ9C0K0 894 aaPredicted RBP17.81■□□□□ 0.44
SRRT-217ENST00000618411 MYO5BQ9ULV0 1848 aa17.81■□□□□ 0.44
SRRT-217ENST00000618411 NECAB1Q8N987 351 aa17.81■□□□□ 0.44
SRRT-217ENST00000618411 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
SRRT-217ENST00000618411 ST7Q9NRC1 585 aa17.81■□□□□ 0.44
SRRT-217ENST00000618411 MIS18AQ9NYP9 233 aa17.81■□□□□ 0.44
SRRT-217ENST00000618411 L2HGDHQ9H9P8 463 aa17.81■□□□□ 0.44
SRRT-217ENST00000618411 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
SRRT-217ENST00000618411 DTNBO60941 627 aa17.8■□□□□ 0.44
SRRT-217ENST00000618411 NR1I2O75469 434 aa17.8■□□□□ 0.44
SRRT-217ENST00000618411 CCZ1BP86790 482 aa17.8■□□□□ 0.44
SRRT-217ENST00000618411 CCZ1P86791 482 aaPredicted RBP17.8■□□□□ 0.44
SRRT-217ENST00000618411 CCDC69A6NI79 296 aa17.8■□□□□ 0.44
SRRT-217ENST00000618411 SURF6O75683 361 aaKnown RBP17.8■□□□□ 0.44
SRRT-217ENST00000618411 ARID5BQ14865 1188 aa17.8■□□□□ 0.44
SRRT-217ENST00000618411 USP44Q9H0E7 712 aa17.8■□□□□ 0.44
SRRT-217ENST00000618411 TFIP11Q9UBB9 837 aaKnown RBP17.8■□□□□ 0.44
SRRT-217ENST00000618411 UBTFL1P0CB47 393 aaPredicted RBP17.79■□□□□ 0.44
SRRT-217ENST00000618411 PRPF40BQ6NWY9 871 aaKnown RBP17.79■□□□□ 0.44
SRRT-217ENST00000618411 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
SRRT-217ENST00000618411 XRN1Q8IZH2 1706 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms