RNA–Protein interactions for RNA: ENST00000616230.1

PCDHGC3-203, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-203ENST00000616230 ZNF316A6NFI3 1004 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-203ENST00000616230 H0YIN7 160 aa16.09■□□□□ 0.17
PCDHGC3-203ENST00000616230 C2CD5Q86YS7 1000 aa16.09■□□□□ 0.17
PCDHGC3-203ENST00000616230 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
PCDHGC3-203ENST00000616230 CNBD1Q8NA66 436 aa16.09■□□□□ 0.17
PCDHGC3-203ENST00000616230 PDZRN3Q9UPQ7 1066 aa16.09■□□□□ 0.17
PCDHGC3-203ENST00000616230 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
PCDHGC3-203ENST00000616230 CCDC88AQ3V6T2 1871 aa16.08■□□□□ 0.17
PCDHGC3-203ENST00000616230 PDE6BP35913 854 aa16.08■□□□□ 0.16
PCDHGC3-203ENST00000616230 ST5P78524 1137 aa16.08■□□□□ 0.16
PCDHGC3-203ENST00000616230 HLFQ16534 295 aa16.08■□□□□ 0.16
PCDHGC3-203ENST00000616230 TTLL6Q8N841 843 aa16.08■□□□□ 0.16
PCDHGC3-203ENST00000616230 CHL1O00533 1208 aa16.07■□□□□ 0.16
PCDHGC3-203ENST00000616230 NPHP1O15259 732 aa16.07■□□□□ 0.16
PCDHGC3-203ENST00000616230 MYL6BP14649 208 aa16.07■□□□□ 0.16
PCDHGC3-203ENST00000616230 NGEFQ8N5V2 710 aa16.07■□□□□ 0.16
PCDHGC3-203ENST00000616230 GPBP1L1Q9HC44 474 aaPredicted RBP16.07■□□□□ 0.16
PCDHGC3-203ENST00000616230 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
PCDHGC3-203ENST00000616230 FER1L6Q2WGJ9 1857 aa16.06■□□□□ 0.16
PCDHGC3-203ENST00000616230 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
PCDHGC3-203ENST00000616230 ERVV-1B6SEH8 477 aa16.06■□□□□ 0.16
PCDHGC3-203ENST00000616230 C1QTNF8P60827 252 aa16.06■□□□□ 0.16
PCDHGC3-203ENST00000616230 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
PCDHGC3-203ENST00000616230 TTLL7Q6ZT98 887 aa16.06■□□□□ 0.16
PCDHGC3-203ENST00000616230 NBPF5PQ86XG9 351 aaPredicted RBP16.06■□□□□ 0.16
PCDHGC3-203ENST00000616230 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
PCDHGC3-203ENST00000616230 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
PCDHGC3-203ENST00000616230 CCDC184Q52MB2 194 aa16.05■□□□□ 0.16
PCDHGC3-203ENST00000616230 KIF6Q6ZMV9 814 aa16.05■□□□□ 0.16
PCDHGC3-203ENST00000616230 LRP10Q7Z4F1 713 aa16.05■□□□□ 0.16
PCDHGC3-203ENST00000616230 ZNF526Q8TF50 670 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-203ENST00000616230 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-203ENST00000616230 APAF1O14727 1248 aa16.04■□□□□ 0.16
PCDHGC3-203ENST00000616230 EIF2S2P20042 333 aaKnown RBP16.04■□□□□ 0.16
PCDHGC3-203ENST00000616230 PDIA6Q15084 440 aa16.04■□□□□ 0.16
PCDHGC3-203ENST00000616230 C9orf131Q5VYM1 1079 aa16.04■□□□□ 0.16
PCDHGC3-203ENST00000616230 ZNF622Q969S3 477 aaKnown RBP eCLIP16.04■□□□□ 0.16
PCDHGC3-203ENST00000616230 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
PCDHGC3-203ENST00000616230 TIAM2Q8IVF5 1701 aa16.04■□□□□ 0.16
PCDHGC3-203ENST00000616230 SRGNP10124 158 aa16.03■□□□□ 0.16
PCDHGC3-203ENST00000616230 KRT24Q2M2I5 525 aa16.03■□□□□ 0.16
PCDHGC3-203ENST00000616230 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
PCDHGC3-203ENST00000616230 CFAP44Q96MT7 982 aa16.03■□□□□ 0.16
PCDHGC3-203ENST00000616230 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.16
PCDHGC3-203ENST00000616230 RASSF7Q02833 373 aa16.02■□□□□ 0.16
PCDHGC3-203ENST00000616230 PROSER3Q2NL68 480 aa16.02■□□□□ 0.16
PCDHGC3-203ENST00000616230 STYK1Q6J9G0 422 aa16.02■□□□□ 0.16
PCDHGC3-203ENST00000616230 MASTLQ96GX5 879 aa16.02■□□□□ 0.16
PCDHGC3-203ENST00000616230 ZBTB3Q9H5J0 574 aa16.02■□□□□ 0.16
PCDHGC3-203ENST00000616230 RNF181Q9P0P0 153 aa16.02■□□□□ 0.16
PCDHGC3-203ENST00000616230 IBTKQ9P2D0 1353 aaPredicted RBP16.01■□□□□ 0.15
PCDHGC3-203ENST00000616230 UBN2Q6ZU65 1347 aa16.01■□□□□ 0.15
PCDHGC3-203ENST00000616230 KLRG2A4D1S0 409 aaPredicted RBP16.01■□□□□ 0.15
PCDHGC3-203ENST00000616230 FAM177BA6PVY3 158 aa16.01■□□□□ 0.15
PCDHGC3-203ENST00000616230 GIGYF2Q6Y7W6 1299 aaKnown RBP16.01■□□□□ 0.15
PCDHGC3-203ENST00000616230 NFKBIEO00221 500 aa16■□□□□ 0.15
PCDHGC3-203ENST00000616230 ANXA1P04083 346 aa16■□□□□ 0.15
PCDHGC3-203ENST00000616230 HOXB7P09629 217 aa16■□□□□ 0.15
PCDHGC3-203ENST00000616230 ZNF853P0CG23 659 aa16■□□□□ 0.15
PCDHGC3-203ENST00000616230 PRELPP51888 382 aa16■□□□□ 0.15
PCDHGC3-203ENST00000616230 NECTIN2Q92692 538 aa16■□□□□ 0.15
PCDHGC3-203ENST00000616230 CNKSR1Q969H4 720 aa16■□□□□ 0.15
PCDHGC3-203ENST00000616230 NYXQ9GZU5 481 aa16■□□□□ 0.15
PCDHGC3-203ENST00000616230 ABCC12Q96J65 1359 aa16■□□□□ 0.15
PCDHGC3-203ENST00000616230 ANP32CO43423 234 aa15.99■□□□□ 0.15
PCDHGC3-203ENST00000616230 C21orf2O43822 256 aa15.99■□□□□ 0.15
PCDHGC3-203ENST00000616230 LMNB1P20700 586 aa15.99■□□□□ 0.15
PCDHGC3-203ENST00000616230 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
PCDHGC3-203ENST00000616230 ZNF34Q8IZ26 560 aa15.99■□□□□ 0.15
PCDHGC3-203ENST00000616230 DDX21Q9NR30 783 aaKnown RBP eCLIP15.99■□□□□ 0.15
PCDHGC3-203ENST00000616230 MBIPQ9NS73 344 aa15.99■□□□□ 0.15
PCDHGC3-203ENST00000616230 IFT57Q9NWB7 429 aa15.99■□□□□ 0.15
PCDHGC3-203ENST00000616230 RIC1Q4ADV7 1423 aa15.99■□□□□ 0.15
PCDHGC3-203ENST00000616230 KIF3CO14782 793 aa15.98■□□□□ 0.15
PCDHGC3-203ENST00000616230 NPR1P16066 1061 aa15.98■□□□□ 0.15
PCDHGC3-203ENST00000616230 GPTP24298 496 aa15.98■□□□□ 0.15
PCDHGC3-203ENST00000616230 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
PCDHGC3-203ENST00000616230 CALD1Q05682 793 aaKnown RBP15.98■□□□□ 0.15
PCDHGC3-203ENST00000616230 SUSD4Q5VX71 490 aa15.98■□□□□ 0.15
PCDHGC3-203ENST00000616230 NUTM1Q86Y26 1132 aa15.98■□□□□ 0.15
PCDHGC3-203ENST00000616230 ZC3H4Q9UPT8 1303 aaKnown RBP15.97■□□□□ 0.15
PCDHGC3-203ENST00000616230 NTSR2O95665 410 aa15.97■□□□□ 0.15
PCDHGC3-203ENST00000616230 HDGFL1Q5TGJ6 251 aa15.97■□□□□ 0.15
PCDHGC3-203ENST00000616230 COPS6Q7L5N1 327 aa15.97■□□□□ 0.15
PCDHGC3-203ENST00000616230 CHPF2Q9P2E5 772 aa15.97■□□□□ 0.15
PCDHGC3-203ENST00000616230 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-203ENST00000616230 LAMB2P55268 1798 aa15.96■□□□□ 0.15
PCDHGC3-203ENST00000616230 GNAI1P63096 354 aa15.96■□□□□ 0.15
PCDHGC3-203ENST00000616230 AIMP1Q12904 312 aaKnown RBP15.96■□□□□ 0.15
PCDHGC3-203ENST00000616230 ERFEQ4G0M1 354 aa15.96■□□□□ 0.15
PCDHGC3-203ENST00000616230 PARP10Q53GL7 1025 aa15.96■□□□□ 0.15
PCDHGC3-203ENST00000616230 DUSP27Q5VZP5 1158 aa15.96■□□□□ 0.15
PCDHGC3-203ENST00000616230 XAGE3Q8WTP9 111 aa15.96■□□□□ 0.15
PCDHGC3-203ENST00000616230 MRS2Q9HD23 443 aa15.96■□□□□ 0.15
PCDHGC3-203ENST00000616230 LTBP3Q9NS15 1303 aa15.95■□□□□ 0.14
PCDHGC3-203ENST00000616230 CRY2Q49AN0 593 aa15.95■□□□□ 0.14
PCDHGC3-203ENST00000616230 SOGA3Q5TF21 947 aa15.95■□□□□ 0.14
PCDHGC3-203ENST00000616230 PPP1R42Q7Z4L9 355 aa15.95■□□□□ 0.14
PCDHGC3-203ENST00000616230 C7orf43Q8WVR3 580 aa15.95■□□□□ 0.14
PCDHGC3-203ENST00000616230 NMRK2Q9NPI5 230 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms