RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 FEZ1Q99689 392 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 USO1O60763 962 aaKnown RBP15.4■□□□□ 0.06
NLRC3-204ENST00000615877 CTR9Q6PD62 1173 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 CNNM3Q8NE01 707 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 PPP1R12BO60237 982 aaPredicted RBP15.39■□□□□ 0.05
NLRC3-204ENST00000615877 PAFAH1B1P43034 410 aa15.39■□□□□ 0.05
NLRC3-204ENST00000615877 GPATCH11Q8N954 259 aa15.39■□□□□ 0.05
NLRC3-204ENST00000615877 TSG101Q99816 390 aa15.39■□□□□ 0.05
NLRC3-204ENST00000615877 SPTY2D1Q68D10 685 aaPredicted RBP15.39■□□□□ 0.05
NLRC3-204ENST00000615877 LARP6Q9BRS8 491 aaKnown RBP15.39■□□□□ 0.05
NLRC3-204ENST00000615877 DNAI2Q9GZS0 605 aa15.39■□□□□ 0.05
NLRC3-204ENST00000615877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.39■□□□□ 0.05
NLRC3-204ENST00000615877 IFIT1P09914 478 aaKnown RBP15.39■□□□□ 0.05
NLRC3-204ENST00000615877 WAPLQ7Z5K2 1190 aa15.39■□□□□ 0.05
NLRC3-204ENST00000615877 FERMT2Q96AC1 680 aa15.39■□□□□ 0.05
NLRC3-204ENST00000615877 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
NLRC3-204ENST00000615877 C11orf95C9JLR9 678 aaPredicted RBP15.39■□□□□ 0.05
NLRC3-204ENST00000615877 UBE2HP62256 183 aa15.39■□□□□ 0.05
NLRC3-204ENST00000615877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.39■□□□□ 0.05
NLRC3-204ENST00000615877 GOLGA6L9A6NEM1 432 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 CCDC150Q8NCX0 1101 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 NAPBQ9H115 298 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 PHAXQ9H814 394 aaKnown RBP15.38■□□□□ 0.05
NLRC3-204ENST00000615877 ZNF287Q9HBT7 754 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 DHX29Q7Z478 1369 aaKnown RBP15.38■□□□□ 0.05
NLRC3-204ENST00000615877 BMP2KLQ5H9B9 411 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 MMRN2Q9H8L6 949 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
NLRC3-204ENST00000615877 GCOM1H8Y6P7 765 aaPredicted RBP15.38■□□□□ 0.05
NLRC3-204ENST00000615877 IGHDP01880 384 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 MYZAPP0CAP1 466 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 TIGD1Q96MW7 591 aa15.38■□□□□ 0.05
NLRC3-204ENST00000615877 SAMM50Q9Y512 469 aa15.37■□□□□ 0.05
NLRC3-204ENST00000615877 TFIP11Q9UBB9 837 aaKnown RBP15.37■□□□□ 0.05
NLRC3-204ENST00000615877 CCDC171Q6TFL3 1326 aa15.37■□□□□ 0.05
NLRC3-204ENST00000615877 TRIM27P14373 513 aa15.37■□□□□ 0.05
NLRC3-204ENST00000615877 CCDC8Q9H0W5 538 aaPredicted RBP15.37■□□□□ 0.05
NLRC3-204ENST00000615877 PUF60Q9UHX1 559 aaKnown RBP15.37■□□□□ 0.05
NLRC3-204ENST00000615877 BIN1O00499 593 aa15.37■□□□□ 0.05
NLRC3-204ENST00000615877 ZNF165P49910 485 aa15.37■□□□□ 0.05
NLRC3-204ENST00000615877 KRT222Q8N1A0 295 aa15.37■□□□□ 0.05
NLRC3-204ENST00000615877 AKAP2Q9Y2D5 859 aa15.37■□□□□ 0.05
NLRC3-204ENST00000615877 SMC1AQ14683 1233 aaKnown RBP15.36■□□□□ 0.05
NLRC3-204ENST00000615877 NUDT16Q96DE0 195 aaKnown RBP15.36■□□□□ 0.05
NLRC3-204ENST00000615877 XRCC6P12956 609 aaKnown RBP eCLIP15.36■□□□□ 0.05
NLRC3-204ENST00000615877 SLC5A1P13866 664 aa15.36■□□□□ 0.05
NLRC3-204ENST00000615877 CETN2P41208 172 aa15.36■□□□□ 0.05
NLRC3-204ENST00000615877 VPS36Q86VN1 386 aa15.36■□□□□ 0.05
NLRC3-204ENST00000615877 ZNF830Q96NB3 372 aaPredicted RBP15.36■□□□□ 0.05
NLRC3-204ENST00000615877 IFIT5Q13325 482 aaKnown RBP15.35■□□□□ 0.05
NLRC3-204ENST00000615877 ALS2CR12Q96Q35 445 aa15.35■□□□□ 0.05
NLRC3-204ENST00000615877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.35■□□□□ 0.05
NLRC3-204ENST00000615877 NOLC1Q14978 699 aaKnown RBP eCLIP15.35■□□□□ 0.05
NLRC3-204ENST00000615877 CCDC196A0A1B0GTZ2 297 aa15.35■□□□□ 0.05
NLRC3-204ENST00000615877 FGFR1OPO95684 399 aaKnown RBP15.35■□□□□ 0.05
NLRC3-204ENST00000615877 HCLS1P14317 486 aaPredicted RBP15.35■□□□□ 0.05
NLRC3-204ENST00000615877 NLRP5P59047 1200 aa15.35■□□□□ 0.05
NLRC3-204ENST00000615877 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
NLRC3-204ENST00000615877 JARID2Q92833 1246 aaPredicted RBP15.35■□□□□ 0.05
NLRC3-204ENST00000615877 NAIPQ13075 1403 aa15.35■□□□□ 0.05
NLRC3-204ENST00000615877 RPGRIP1LQ68CZ1 1315 aa15.35■□□□□ 0.05
NLRC3-204ENST00000615877 CCT2P78371 535 aaKnown RBP15.35■□□□□ 0.05
NLRC3-204ENST00000615877 ZNF354CQ86Y25 554 aa15.35■□□□□ 0.05
NLRC3-204ENST00000615877 RAB11FIP4Q86YS3 637 aa15.35■□□□□ 0.05
NLRC3-204ENST00000615877 IPO4Q8TEX9 1081 aaKnown RBP15.35■□□□□ 0.05
NLRC3-204ENST00000615877 PPFIA3O75145 1194 aa15.34■□□□□ 0.05
NLRC3-204ENST00000615877 UBE4AQ14139 1066 aa15.34■□□□□ 0.05
NLRC3-204ENST00000615877 NAA15Q9BXJ9 866 aaKnown RBP15.34■□□□□ 0.05
NLRC3-204ENST00000615877 F8W031 263 aaPredicted RBP15.34■□□□□ 0.05
NLRC3-204ENST00000615877 ZBTB3Q9H5J0 574 aa15.34■□□□□ 0.05
NLRC3-204ENST00000615877 TDRD12Q587J7 1177 aaKnown RBP15.34■□□□□ 0.05
NLRC3-204ENST00000615877 TTC22Q5TAA0 569 aa15.34■□□□□ 0.05
NLRC3-204ENST00000615877 GIMAP6Q6P9H5 292 aa15.34■□□□□ 0.05
NLRC3-204ENST00000615877 CCDC12Q8WUD4 166 aaPredicted RBP15.34■□□□□ 0.05
NLRC3-204ENST00000615877 CCDC175P0C221 793 aa15.34■□□□□ 0.05
NLRC3-204ENST00000615877 GOLGA8BA8MQT2 603 aa15.34■□□□□ 0.05
NLRC3-204ENST00000615877 F6X3S4 739 aa15.34■□□□□ 0.05
NLRC3-204ENST00000615877 SLC12A7Q9Y666 1083 aa15.34■□□□□ 0.05
NLRC3-204ENST00000615877 CAVIN2O95810 425 aa15.33■□□□□ 0.05
NLRC3-204ENST00000615877 CTNNA2P26232 953 aa15.33■□□□□ 0.05
NLRC3-204ENST00000615877 ZFP91Q96JP5 570 aaPredicted RBP15.33■□□□□ 0.05
NLRC3-204ENST00000615877 GSTTP1A0A1W2PQM5 241 aa15.33■□□□□ 0.04
NLRC3-204ENST00000615877 GNG11P61952 73 aa15.33■□□□□ 0.04
NLRC3-204ENST00000615877 HLTFQ14527 1009 aaKnown RBP eCLIP15.33■□□□□ 0.04
NLRC3-204ENST00000615877 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
NLRC3-204ENST00000615877 LARP1Q6PKG0 1096 aaKnown RBP15.33■□□□□ 0.04
NLRC3-204ENST00000615877 CTCFLQ8NI51 663 aaPredicted RBP15.33■□□□□ 0.04
NLRC3-204ENST00000615877 EVI5LQ96CN4 794 aa15.33■□□□□ 0.04
NLRC3-204ENST00000615877 RFC4P35249 363 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 ACSBG1Q96GR2 724 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 PUS7Q96PZ0 661 aaKnown RBP15.32■□□□□ 0.04
NLRC3-204ENST00000615877 TROQ12816 1431 aaPredicted RBP15.32■□□□□ 0.04
NLRC3-204ENST00000615877 GOLGA8AA7E2F4 631 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 MAATS1Q7Z4T9 603 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 ZNF213O14771 459 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 SPECC1Q5M775 1068 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 PANK2Q9BZ23 570 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 ZSWIM4Q9H7M6 989 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms